New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3991309 =78 (1.200)5 (0.080) 5/248 NT 7.6% coding (318/894 nt) PP_3517 hypothetical protein
?NC_002947 3991355 = 48 (0.790)coding (272/894 nt) PP_3517 hypothetical protein

CAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTTCATCAGGTTTTTCCTGGC  >  NC_002947/3991207‑3991502
                                                                                                                                                    |                                                                                                                                                   
tgactggcgcacctacataccgcgcggtggtgtgcaacgcagcgatgtggatacctttctcgagcagtatcgcgcacagcacagcatcgacatgtcaggcgaGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCt                                                                                                                                                     >  3:286397‑M1/103‑149 (MQ=255)
  actggcgcacctacataccgcgcggtggtgtgcaacgcagcgatgtggatacctttctcgagcagtatcgcgcacagcacagcatcgacatgtcaggcgaGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTc                                                                                                                                                    >  3:255978‑M1/101‑148 (MQ=255)
   aaCACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGc                                                                                                                                                  <  7:96781/149‑1 (MQ=255)
        ccAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGa                                                                                                                                              >  8:285062/1‑148 (MQ=255)
        ccAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGa                                                                                                                                              >  4:211557/1‑148 (MQ=255)
        ccAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGa                                                                                                                                              >  4:333866/1‑148 (MQ=255)
         cAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACa                                                                                                                                            <  7:295088/149‑1 (MQ=255)
          aGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACAt                                                                                                                                           >  2:213289/1‑149 (MQ=255)
            cTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGt                                                                                                                                         <  4:280979/149‑1 (MQ=255)
               gTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGa                                                                                                                                      <  3:333866/149‑1 (MQ=255)
                ttGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGAt                                                                                                                                     <  6:373786/149‑1 (MQ=255)
                  gcgcCCGATACGACGGGCTCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGAtg                                                                                                                                    <  7:86914/148‑1 (MQ=255)
                  gcgcCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGTCCTTGCCCTCGCCTGACATGTCGAtg                                                                                                                                    <  1:11675/148‑1 (MQ=255)
                      ccGATACGACGGTCGAGGATTTCGGCACTGCCCGCCTTGCTGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCTGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCAAGGATGGCCTTGCCCTCGCCTGACATGTCGAtgctgtg                                                                                                                               <  7:304448/149‑1 (MQ=255)
                      ccGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGAtgctgtg                                                                                                                               >  7:6851/1‑149 (MQ=255)
                        gATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGAtgctgtgct                                                                                                                             >  8:385129/1‑149 (MQ=255)
                         aTACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGAtgctgtgctg                                                                                                                            >  3:117369/1‑149 (MQ=255)
                          tACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATgctgtgctgt                                                                                                                           <  4:293415/149‑1 (MQ=255)
                          tACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATgctgtgctgt                                                                                                                           <  4:117369/149‑1 (MQ=255)
                               cgGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGcgcg                                                                                                                      >  3:51621/1‑149 (MQ=255)
                                gggCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGa                                                                                                                     <  1:383488/149‑1 (MQ=255)
                                           tCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCga                                                                                                           <  5:189367/148‑1 (MQ=255)
                                              gCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGaaa                                                                                                       <  8:6851/149‑1 (MQ=255)
                                               cACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGGTGCTGTGCTGTGCGCGATACTGCTCGAGAAAg                                                                                                      <  3:211557/149‑1 (MQ=255)
                                               cACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAg                                                                                                      >  7:128132/1‑149 (MQ=255)
                                               cACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAg                                                                                                      <  7:285062/149‑1 (MQ=255)
                                                 cTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGt                                                                                                    <  4:183960/149‑1 (MQ=255)
                                                         cTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACAt                                                                                            <  1:213289/149‑1 (MQ=255)
                                                          ttGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATc                                                                                           >  3:69945/1‑149 (MQ=255)
                                                              ggTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTg                                                                                       <  8:128132/149‑1 (MQ=255)
                                                               gTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGc                                                                                      >  7:206148/1‑149 (MQ=255)
                                                                 cGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGt                                                                                    >  2:219641/1‑149 (MQ=255)
                                                                  gAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGAGGTCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGt                                                                                    <  6:24087/148‑1 (MQ=255)
                                                                   aaGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTg                                                                                  <  1:219641/149‑1 (MQ=255)
                                                                      cgcCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGcac                                                                               <  2:184562/149‑1 (MQ=255)
                                                                            cccTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACaccacc                                                                         <  4:51621/149‑1 (MQ=255)
                                                                                 gctggTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACcgcgc                                                                     <  5:205397/148‑1 (MQ=255)
                                                                                   tggTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTCCACACCACCGCGCgg                                                                   >  8:277158/1‑148 (MQ=255)
                                                                                           gTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGt                                                          >  3:121691/1‑149 (MQ=255)
                                                                                            tCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTg                                                         >  5:324013/1‑149 (MQ=255)
                                                                                                    gagggcaaggccatcctggcggtgggcgccggtcactggaccttgcccTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGt                                                  >  3:255978‑M2/49‑148 (MQ=255)
                                                                                                     agggcaaggccatcctggcggtgggcgccggtcactggaccttgcccTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCa                                                >  3:286397‑M2/48‑149 (MQ=255)
                                                                                                        gcaaggccatcctggcggtgggcgccggtcactggaccttgcccTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAg                                                   <  2:209610‑M2/99‑1 (MQ=255)
                                                                                                        gcaaggccatcctggcggtgggcgccggtcactggaccttgcccTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAg                                                   >  1:209610‑M2/45‑143 (MQ=255)
                                                                                                        GCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACCCCACCGCGCGGTATGTAGGTGCGCCAGTCATCg                                             <  7:172487‑M1/149‑1 (MQ=255)
                                                                                                         CAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGc                                            <  5:361912‑M1/149‑1 (MQ=255)
                                                                                                            ggccatcctggcggtgggcgccggtcactggaccttgcccTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCa                                         <  4:255978‑M2/109‑1 (MQ=255)
                                                                                                                   tGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTg                                  >  2:85927/1‑149 (MQ=255)
                                                                                                                   tGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTg                                  <  7:385129/149‑1 (MQ=255)
                                                                                                                     aCCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTggg                                <  6:361912/149‑1 (MQ=255)
                                                                                                                         gcgcCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAg                            >  6:114123/1‑149 (MQ=255)
                                                                                                                           gcCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGTTGCTGGGcgatga                          <  2:22503/149‑6 (MQ=255)
                                                                                                                             ccACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGACGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCgg                        >  2:36732/1‑149 (MQ=255)
                                                                                                                                ccGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCt                     >  2:262575/1‑149 (MQ=255)
                                                                                                                                 cGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCtt                    >  2:273553/1‑149 (MQ=255)
                                                                                                                                  gCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTAAGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTtc                   <  4:69945/149‑1 (MQ=255)
                                                                                                                                   ccAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTtca                  >  8:16667/1‑149 (MQ=255)
                                                                                                                                     aGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTtcatc                <  6:324013/149‑1 (MQ=255)
                                                                                                                                       gATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACCCCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCCCCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGAGGGCTTCATCAg              >  5:41149/1‑149 (MQ=255)
                                                                                                                                             cttgcccTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTTCATCAGGttttt        <  7:277158‑M2/142‑1 (MQ=255)
                                                                                                                                              ttgcccTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTTCATCAGGttttt        >  5:234375‑M2/7‑148 (MQ=255)
                                                                                                                                                gcccTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTTCATCAGGTTTTTc       <  4:121691‑M2/143‑1 (MQ=255)
                                                                                                                                                  ccTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTTCATCAGGTTTTTCCTgg   >  4:212574‑M2/3‑149 (MQ=255)
                                                                                                                                                  ccTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTTCATCAGGTTTTTCCTgg   >  7:170222‑M2/3‑149 (MQ=255)
                                                                                                                                                   cTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTTCATCAGGTTTTTCCTGGc  >  7:313909‑M2/2‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CAGAACACCCAGCTCGTTGCGCCCGATACGACGGGCGCGGATTTCGGCACTGCCCGCCTTGAGGTCGAAGCGCCAGCCCTGGCTGGTTCTGGTCAGCGGTATGGGCAAGGTCCAGTGACCGGCGCCCACCGCCAGGATGGCCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTTCATCAGGTTTTTCCTGGC  >  NC_002947/3991207‑3991502

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.