New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 417203346 (0.710)3 (0.050) 3/250 NT 6.2% coding (90/879 nt) PP_3670 DMT superfamily permease
?NC_002947 = 4172070 48 (0.780)coding (53/879 nt) PP_3670 DMT superfamily permease

GCAATACCGGCCGGCGGGTGCGCAACACGTTGAGCCCAGACTTGGGCAGGAAGATGCCGGCCATCAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAGGCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4171888‑4172033
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatcgCGTTGGTGGTGGTGGCGACGTTCCTGTTCGCCAGCCACGATGCCTTGTCCAAATTCCTGGGTGGCCTGTACCCGATAGTCATGGTGGTGTGGGCGCGTTATGTGGTGCACACGTTGCTGATGGCCGGCATCTTCCTGCCCAAGTCT  <  NC_002947/4172070‑4171925
                                                                                                                                                                                                                                                                                                    
GCAATACCGGCCGGCGGGTGCGCAACACGTTGAGCCCAGACTTGGGCAGGAAGATGCCGGCCATCAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAGGCATCGCGT                                                                                                                                                 >  3:151926/1‑149
                     GCAACACGTTGAGCCCAGACTTGGGCAGGAAGATGCCGGCCATCAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAG                                                                                                                                                          <  7:13101/119‑1
                     GCAACACGTTGAGCCCAGACTTGGGCAGGAAGATGCCGGCCATCAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAG                                                                                                                                                          >  8:13101/1‑119
                                               AGGAAGATGCCGGCCATCAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAGGCATCGCGTTGGTGGTGGTGGCGACGTTCCTGTTCGCCAGCCACGATGCCTTGTCC                                                                                                  <  4:151926/149‑1
                                                 GAAGATGCCGGCCATCAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAGGCATCGCGTTGGTGGTGGTGGCGACGTTCCTGTTCGCCAGCCACGATGCCTT                                                                                                      <  7:326783/143‑1
                                                 GAAGATGCCGGCCATCAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAGGCATCGCGTTGGTGGTGGTGGCGACGTTCCTGTTCGCCAGCCACGATGCCTT                                                                                                      >  8:326783/1‑143
                                                                CAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAG                                                                                                                                                          >  1:312243/1‑76
                                                                CAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAG                                                                                                                                                          <  2:312243/76‑1
                                                                                                                                             aATCGCGTTGGTGGTGGTGGCGACGTTCATGTTCGCCAGCCACGATGCCTTGTCCAAATTCCTGGGTGGCATGTACCCTATAGTCATGGTGGTGTGGGCGCGTTATGTGGTGCACACGTTGCTGATGGCCGGCATCTTCCTGCCCAAGT    <  1:166836/148‑1
                                                                                                                                             CATCGCGTTGGTGGTGGTGGCGACGTTCCTGTTCGCCAGCCACGATGCCTTGTCCAAATTCCTGGGTGGCCTGTACCCGATAGTCATGGTGGTGTGGGCGCGTTATGTGGTGCACACGTTGCTGATGGCCGGCATCTTCCTGCCCAAGT    >  2:325431/1‑149
                                                                                                                                               TCGCGTTGGTGGTGGTGGCGACGTTCCTGTTCGCCAGCCACGATGCCTTGTCCAAATTCCTGGGTGGCCTGTACCCGATAGTCATGGTGGTGTGGGCGCGTTATGTGGTGCACACGTTGCTGATGGCCGGCATCTTCCTGCCCAAGTCT  >  8:194510/1‑149
                                                                                                                                                                                                                                                                                                    
GCAATACCGGCCGGCGGGTGCGCAACACGTTGAGCCCAGACTTGGGCAGGAAGATGCCGGCCATCAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAGGCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4171888‑4172033
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatcgCGTTGGTGGTGGTGGCGACGTTCCTGTTCGCCAGCCACGATGCCTTGTCCAAATTCCTGGGTGGCCTGTACCCGATAGTCATGGTGGTGTGGGCGCGTTATGTGGTGCACACGTTGCTGATGGCCGGCATCTTCCTGCCCAAGTCT  <  NC_002947/4172070‑4171925

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.