New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4172033 | 46 (0.710) | 3 (0.050) | 3/250 | NT | 6.2% | coding (90/879 nt) | PP_3670 | DMT superfamily permease |
? | NC_002947 | = 4172070 | 48 (0.780) | coding (53/879 nt) | PP_3670 | DMT superfamily permease |
GCAATACCGGCCGGCGGGTGCGCAACACGTTGAGCCCAGACTTGGGCAGGAAGATGCCGGCCATCAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAGGCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4171888‑4172033 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatcgCGTTGGTGGTGGTGGCGACGTTCCTGTTCGCCAGCCACGATGCCTTGTCCAAATTCCTGGGTGGCCTGTACCCGATAGTCATGGTGGTGTGGGCGCGTTATGTGGTGCACACGTTGCTGATGGCCGGCATCTTCCTGCCCAAGTCT < NC_002947/4172070‑4171925 GCAATACCGGCCGGCGGGTGCGCAACACGTTGAGCCCAGACTTGGGCAGGAAGATGCCGGCCATCAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAGGCATCGCGT > 3:151926/1‑149 GCAACACGTTGAGCCCAGACTTGGGCAGGAAGATGCCGGCCATCAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAG < 7:13101/119‑1 GCAACACGTTGAGCCCAGACTTGGGCAGGAAGATGCCGGCCATCAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAG > 8:13101/1‑119 AGGAAGATGCCGGCCATCAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAGGCATCGCGTTGGTGGTGGTGGCGACGTTCCTGTTCGCCAGCCACGATGCCTTGTCC < 4:151926/149‑1 GAAGATGCCGGCCATCAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAGGCATCGCGTTGGTGGTGGTGGCGACGTTCCTGTTCGCCAGCCACGATGCCTT < 7:326783/143‑1 GAAGATGCCGGCCATCAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAGGCATCGCGTTGGTGGTGGTGGCGACGTTCCTGTTCGCCAGCCACGATGCCTT > 8:326783/1‑143 CAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAG > 1:312243/1‑76 CAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAG < 2:312243/76‑1 aATCGCGTTGGTGGTGGTGGCGACGTTCATGTTCGCCAGCCACGATGCCTTGTCCAAATTCCTGGGTGGCATGTACCCTATAGTCATGGTGGTGTGGGCGCGTTATGTGGTGCACACGTTGCTGATGGCCGGCATCTTCCTGCCCAAGT < 1:166836/148‑1 CATCGCGTTGGTGGTGGTGGCGACGTTCCTGTTCGCCAGCCACGATGCCTTGTCCAAATTCCTGGGTGGCCTGTACCCGATAGTCATGGTGGTGTGGGCGCGTTATGTGGTGCACACGTTGCTGATGGCCGGCATCTTCCTGCCCAAGT > 2:325431/1‑149 TCGCGTTGGTGGTGGTGGCGACGTTCCTGTTCGCCAGCCACGATGCCTTGTCCAAATTCCTGGGTGGCCTGTACCCGATAGTCATGGTGGTGTGGGCGCGTTATGTGGTGCACACGTTGCTGATGGCCGGCATCTTCCTGCCCAAGTCT > 8:194510/1‑149 GCAATACCGGCCGGCGGGTGCGCAACACGTTGAGCCCAGACTTGGGCAGGAAGATGCCGGCCATCAGCAACGTGTGCACCACATAACGCGCCCACACCACCATGACTATCGGGTACAGGCCACCCAGGAATTTGGACAAGGCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4171888‑4172033 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatcgCGTTGGTGGTGGTGGCGACGTTCCTGTTCGCCAGCCACGATGCCTTGTCCAAATTCCTGGGTGGCCTGTACCCGATAGTCATGGTGGTGTGGGCGCGTTATGTGGTGCACACGTTGCTGATGGCCGGCATCTTCCTGCCCAAGTCT < NC_002947/4172070‑4171925 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |