New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4319235 | 39 (0.600) | 4 (0.070) | 4/246 | NT | 9.8% | coding (206/807 nt) | PP_3790 | diaminopimelate epimerase |
? | NC_002947 | = 4319255 | 37 (0.610) | coding (226/807 nt) | PP_3790 | diaminopimelate epimerase |
ACTGCGTACCGTTTGATTGCTCCAAACCGATGATTTCACGTATTTGCGACCGACACCGCGGGTTGGGCAGCGACGGCATACTGGTGCCGGTGATCAAAGAAGGTGAACGGTTGTCGGTACGGATCTACAACACAGACGGTTCCCAGGCAGAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4319082‑4319235 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagagaaTACGCAGGCCATTACCACTTTTCTCTGCCTGGGAACCGTCTGTGTTGTAGATCCGTACCGACAACCGTTCACCTTCTTTGATCACCGGCACCAGTATGCCGTCGCTGCCCAACCCGCGGTGTCGGTCGCAAATACGTGAAATCATC < NC_002947/4319255‑4319110 ACTGCGTACCGTTTGATTGCTCCAAACCGATGATTTCACGTATTTGCGACCGACACCGCGGGTTGGGCAGCGACGGCATACTGGTGCCGGTGATCAAAGAAGGTGAACGGTTGTCGGTACGGATCTACAACACAGACGGTTCCCGGGCA < 4:347625/149‑1 CAAACCGATGATTTCACGTATTTGCGACCGACACCGCGGGTTGGGCAGCGACGGCATACTGGTGCCGGTGATCAAAGAAGGTGAACGGTTGTCGGTACGGATCTACAACACAGACGGTTCCCAGGCAGAGAATACGCAGGCCATTACCA > 5:156820/1‑149 ACGTATTTGCGACCGACACCGCGGGTTGGGCAGCGACGGCATACTGGTGCCGGTGATCAAAGAAGGTGAACGGTTGTCGGTACGGATCTACAACACAGACGGTTCCCAGGCAGAGAATACGCAGGCCATTACCACTTTTCTCTGCCTG < 6:156820/148‑1 GACCGACACCGCGGGTTGGGCAGCGACGGCATACTGGTGCCGGTGATCAAAGAAGGTGAACGGTTGTCGGTACGGATCTACAACACAGACGGTTCCCAGGCAGAGAATACGCAGGCCATTACCACTTTTCTCTGC < 3:93801/135‑1 GACCGACACCGCGGGTTGGGCAGCGACGGCATACTGGTGCCGGTGATCAAAGAAGGTGAACGGTTGTCGGTACGGATCTACAACACAGACGGTTCCCAGGCAGAGAATACGCAGGCCATTACCACTTTTCTCTGC > 4:93801/1‑135 AGAATACGCAGGCCATTACCACTTTTCTCTGCCTGGGAACCGTCTGTGTTGTAGATCCGTACCGACAACCGTTCACCTTCTTTGATCACCGGCACCAGTATGCCGTCGCTGCCCAACCCGCGGTGTCGGTCGCAAATACGTGAAATCAT < 3:12127/149‑1 GAATACGCAGGCCATTACCACTTTTCTCTGCCTGGGAACCGTCTGTGTTGTAGATCCGTACCGACAACCGTTCACCTTCTTTGATCACCGGCACCAGTATGCCGTCGCTGCCCAACCCGCGGTGTCGGTCGCAAATACGTGAAATCATC < 3:115648/149‑1 ACTGCGTACCGTTTGATTGCTCCAAACCGATGATTTCACGTATTTGCGACCGACACCGCGGGTTGGGCAGCGACGGCATACTGGTGCCGGTGATCAAAGAAGGTGAACGGTTGTCGGTACGGATCTACAACACAGACGGTTCCCAGGCAGAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4319082‑4319235 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagagaaTACGCAGGCCATTACCACTTTTCTCTGCCTGGGAACCGTCTGTGTTGTAGATCCGTACCGACAACCGTTCACCTTCTTTGATCACCGGCACCAGTATGCCGTCGCTGCCCAACCCGCGGTGTCGGTCGCAAATACGTGAAATCATC < NC_002947/4319255‑4319110 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |