| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4389226 = | 76 (1.170) | 4 (0.070) | 4/244 | NT | 5.6% | coding (1515/1956 nt) | PP_3865 | tail protein |
| ? | NC_002947 | 4389271 = | 65 (1.080) | coding (1470/1956 nt) | PP_3865 | tail protein | |||||
GTGGGAGCTGATCAAGGCCTACACCACGCCGTTCATGGAATTCATTAAAAGCGTGTTTGGCTGGGCCCCGCTGGCATTGATCATCAAGAACTGGGAACCGATCGTGGGCTGGTTCAAGGGGCTGTGGGATCGGGTCAGCCCGTACCTTGAACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4389379‑4389226‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttgaaccaGCCCACGATCGGTTCCCAGTTCTTGATGATCAATGCCAGCGGGGCCCAGCCAAAC‑‑ACGCTTTTAATGAATTCCATGAACGGCGTGGTGTAGGCCTTGATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTT > NC_002947/4389271‑4389414 GTGGGAGCTGATCAAGGCCTACACCACGCCGTTCATGGAATTCATTAAAAGCGTGTTTGGCTGGGCCCCGCTGGCATTGATCATCAAGAACTGGGAACCGATCGTGGGCTGGTTCAAGGGGCTGTGGGATCGGGTCAGCCCGTACCTT > 1:240095/1‑148 tgtGAGCTGATCAAGGCCTACACCACGCCGTTCATGGAATTCATTAAAAGCGTGTTTGGCTGGGCCCCGCTGGCATTGATCATCAAGAACTGGGAACCGATCGTGGGCTGGTTCAAGGGGCTGTGGGATCGGGTCAGCCCGTACCTTG < 7:112471/145‑1 GGAGCTGATCAAGGCCTACACCACGCCGTTCATGGAATTCATTAAAAGCGTGTTTGGCTGGGCCCCGCTGGCATTGATCATCAAGAACTGGGAACCGATCGTGGGCTGGTTCAAGGGGCTGTGGGATCGGGTCAGCCCGTACCTTGAA < 1:118006/148‑1 CTGGTTCAAGGGGCTGTGGGATCGGGTCAGCCCTTACCTTGAACCAGCCCACGATCGGTTCCCAGTTCTTGATGATCAATGCCAGCGGG < 4:17124/89‑1 CTGGTTCAAGGGGCTGTGGGATCGGGTCAGCCCATACCTTGAACCAGCCCACGATCGGTTCCCAGTTCTTGATGATCAATGCCAGCGGG > 3:17124/1‑89 GTTCAAGGGGCTGTGGGATCGGGTCAGCCCGTACCTTGAACCAGCCCACGATCGGTTCCCAGTTCTTGATGATCAATGCCAGCGGGGCCCAGCCAAAC‑‑ACGCTTTTAATGAATTCCATGAACGGCGTGGTGTAGGCCTTGATCAGCTCC > 4:247361/1‑149 cgtGTCAGCCCGTACCTTGAACCAGCCCACGATCGGTTCCCAGTTCTTGATGATCAATGCCAGCGGGGCCCAGCCAAAC‑‑ACGCTTTTAATGAATTCCATGAACGGCGTGGTGTAGGCCTTGATCAGCTCCCACAGGGCGCTGAAGAAC < 3:247361/145‑1 CTTGAACCAGCCCACGATCGGTTCCCAGTTCTTGATGATCAATGCCAGCGGGGCCCAGCCAAACGGACGCTTTTAATGAATTCCATGAACGGCGTGGTGTAGGCCTTGATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTC > 1:120654/1‑149 AACCAGCCCACGAACGGTTCCCAGTTCTTGATGATCAATGCCAGAGGGGCCCAGCCAAAC‑‑ACGCTTTTAATGAATTCCAAGAACGGCGAGGTGTAGGCCTTGATCAGCTCCCACAGGGCGATGAAGAACTGCCCGACCTTCTCCCAGat > 2:247405/1‑147 CCAGCCCACGATCGGTTCCCAGTTCTTGATGATCAATGCCAGCGGGGCCCAGCCAAAC‑‑ACGCTTTTAATGAATTCCATGAACGGCGTGGTGTAGGCCTTGATCAGCTCCCACAGGGCGCTGAAGAACGGC < 5:84430/130‑1 CCAGCCCACGATCGGTTCCCAGTTCTTGATGATCAATGCCAGCGGGGCCCAGCCAAAC‑‑ACGCTTTTAATGAATTCCATGAACGGCGTGGTGTAGGCCTTGATCAGCTCCCACAGGGCGCTGAAGAACGGC > 6:84430/1‑130 GTGGGAGCTGATCAAGGCCTACACCACGCCGTTCATGGAATTCATTAAAAGCGTGTTTGGCTGGGCCCCGCTGGCATTGATCATCAAGAACTGGGAACCGATCGTGGGCTGGTTCAAGGGGCTGTGGGATCGGGTCAGCCCGTACCTTGAACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4389379‑4389226‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttgaaccaGCCCACGATCGGTTCCCAGTTCTTGATGATCAATGCCAGCGGGGCCCAGCCAAAC‑‑ACGCTTTTAATGAATTCCATGAACGGCGTGGTGTAGGCCTTGATCAGCTCCCACAGGGCGCTGAAGAACGGCCCGACCTTCTCCCAGTT > NC_002947/4389271‑4389414 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |