New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4433225 =	94 (1.440)	5 (0.080)	5/252	NT	5.6%	coding (220/351 nt)	PP_5648	hypothetical protein
	?	NC_002947	4433278 =	78 (1.260)					coding (167/351 nt)	PP_5648	hypothetical protein

GAGAAGGTTTTCGGTGATGACGCCAGCGGCTACCTGGAGCCGCGCAAGCAGGGCGGATTCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4433288‑4433225 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaccgAAAACCTTCTCTTCCTGCCAGCTGAACTGGATGCACTGGGCAACCAGCTCTGGCGCCTTGTGCGAGTCGAGCTGCGCAGTCGGCTTGCCGCCACGCGCCGTTTCCATGGTCGCAGAAGCACAACCGGCCAGCATCAGCACCGCAGC  >  NC_002947/4433278‑4433423                                                                                                                                                                                                                    GAGAAGGTTTTCGGTGATGACGCCAGCGGCTACCTGGAGCCGCGCAAGCAGGGCGGATTCACCGAAAACCTTCTCTTCCTGCCAGCTGAACTGGATGCACTGGGCAACCAGCTCTGGCGCCTTGTGCGAGTCGAGCTGCGCAGTCGGCT                                                               >  8:215563/1‑149    AAGGTTTTCGGTGATGACGCCAGCGGCTACCTGGAGCCGCGCAAGCAGGGCGGATTCACCGAAAACCTTCTCTTCCTGCCAGCTGAACTGGATGCACTGGGCAACCAGCTCTGGCGCCTTGTGCGAGTCGAGCTGCGCAGTCGGCTTGC                                                            <  7:215563/149‑1        TTTTCGGTGATGACGCCAGCGGCTACCTGGAGCCGCGCAAGCAGGGCGGATTCACCGAAAACCTTCTCTTCCTGCCAGCTGAACTGGATGCACTGGGCAACCAGCTCTGGCGCCTTGTGCGAGTCGAGCTGCGCAGTCGGCTTGCCGCC                                                        >  3:281632/1‑149             GGTGATGACGCCAGCGGCTACCTGGAGCCGCGCAAGCAGGGCGGATTCACCGAAAACCTTCTCTTCCTGCCAGCTGAACTGGATGCACTGGGCAACCAGCTCTGGCGCCTTGTGCGAGTCGAGCTGCGCAGTCGGCTTGCCGCCACGC                                                    <  4:281632/148‑1              GTGATGACGCCAGCGGCTACCTGGAGCCGCGCAAGCAGGGCGGATTCACCGAAAACCTTCTCTTCCTGCCAGCTGAACTGGATGCACTGGGCAACCAGCTCTGGCGCCTTGTGCGAGTCGAGCTGCGCAGTCGGCTTGCCGCCACGCGC                                                  >  2:11089/1‑149                                                             ACCGAAAACCTTCTCTTCCTGCCAGCTGAACTGGATGCACTGGGCAACCAGCTCTGGCGCCTTGTGCGAGTCGAGCTGCGCAGTCGGCTTGCCGCCACGCGCCGTTTCCATGGTCGCAGAAGCACAACCGGCCAGCATCAGCACCGCAG   >  7:110781/1‑149                                                              CCGAAAACCTTCTCTTCCTGCCAGCTGAACTGGATGCACTGGGCAACCAGCTCTGGCGCCTTGTGCGAGTCGAGCTGCGCAGTCGGCTTGCCGCCACGCGCCGTTTCCATGGTCGCAGAAGCACAACCGGCCAGCATCAGCACCGCAGC  >  4:297886/1‑149                                                                                                                                                                                                                    GAGAAGGTTTTCGGTGATGACGCCAGCGGCTACCTGGAGCCGCGCAAGCAGGGCGGATTCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4433288‑4433225 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaccgAAAACCTTCTCTTCCTGCCAGCTGAACTGGATGCACTGGGCAACCAGCTCTGGCGCCTTGTGCGAGTCGAGCTGCGCAGTCGGCTTGCCGCCACGCGCCGTTTCCATGGTCGCAGAAGCACAACCGGCCAGCATCAGCACCGCAGC  >  NC_002947/4433278‑4433423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.