| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4670169 = | 74 (1.140) | 5 (0.080) | 5/258 | NT | 6.4% | coding (501/1470 nt) | nuoN | NADH‑quinone oxidoreductase subunit N |
| ? | NC_002947 | 4670231 = | 75 (1.180) | coding (563/1470 nt) | nuoN | NADH‑quinone oxidoreductase subunit N | |||||
GCCAACCAGCATCATGCCCAGGCCCAGCTGGGCCACCAGGCTTGGCATGCTGGTGGTAGCCAGGGCCTTGCCGATCTGGTCGAAGCTCAGGCTGCCGGCGTCGGCGTACAGCAGGGCCATGCCGAACAGCAGGAAAGCCGAGCCTGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4670319‑4670169‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccTGAGCTTCGACCAGATCGGCAAGGCCCTGGCTACCACCAGCATGCCAAGCCTGGTGGCCCAGCTGGGCCTGGGCATGATGCTGGTTGGCCTGGCCTTCAAGCTGTCGCTGGTACCGTTCCATCTGTGGACCCCGGACGTGTACGAAGG > NC_002947/4670231‑4670378 GCCAACCAGCATCATGCCCAGGCCCAGCTGGGCCACCAGGCTTGGCATGCTGGTGGTAGCCAGGGCCTTGCCGATCTGGTCGAAGCTCAGGCTGCCGGCGTCGGCGTACAGCAGGGCCATGCCGAACAGCAGGAAAGCCGAGCCTGCGG < 5:131809/149‑1 CAACCAGCATCATGCCCAGGCCCAGCTGGGCCACCAGGCTTGGCATGCTGGTGGTAGCCAGGGCCTTGCCGATCTGGTCGAAGCTCAGGCTGCCGGCGTCGGCGTACAGCAGGGCCATGCCGAACAGCAGGAAAGCCGAGCCTGCGGCC > 5:240495/1‑149 GGTCGAAGCTCAGGCTGCCGGCGTCGGCGTACAGCAGGGCCATGCCGAACAGCAGGAAAGCCGAGCCTGCGG‑‑‑‑‑‑‑‑‑‑‑‑CCAGATCGGCAAGGCCCTGGCTACCACCAGCATGCCAAGCCTGGTGGCCCAGCTGGGCCTGGGCATGATGCTGGTTG > 1:273122/1‑149 GCTCAGGCTGCCGGCGTCGGCGTACAGCAGGGCCATGCCGAACAGCAGGAAAGCCGAGCCTGCGGCCTGAGCTTCGCCCAGATCGGCAAGGCCCTGGCTACCACCAGCATGCCAAGCCTGGTGGCCCAGCTGGGCCTGGGCATGATGCT > 5:18394/1‑149 CTCAGGCTGCCGGCGTCGGCGTACAGCAGGGCCATGCCGAACAGCAGGAAAGCCGAGCCTGCGGCCTGAGCTTCGACCAGATCGGCAAGGCCCTGGCTACCACCAGCATGCCAAGCCTGGTGGCCCAGCTGGGCCTGGGCATGATGCTG > 7:96185/1‑149 TCGGCGTACAGCAGGGCCATGCCGAACAGCAGGAAAGCCGAGCCTGCGGCCTGAGCTTCGACCAGATCGGCAAGGCCCTGGCTACCACCAGCATGCCAAGCCTGGTGGCCCAGCTGGGCCTGGGCATGATGCTGGTTGGCCTGGCCTTC < 8:96185/149‑1 GTACAGCAGGGCCATGCCGAACAGCAGGAAAGCCGAGCCTGCGG‑‑‑‑‑‑‑‑‑‑‑‑CCAGATCGGCAAGGCCCTGGCTACCACCAGCATGCCAAGCCTGGTGGCCCAGCTGGGCCTGGGCATGATGCTGGTTGGCCTGGCCTTCAAGCTGTCGCTGGTACC < 2:273122/149‑1 CCTGAGCTTCGACCAGATCGGCAAGGCCCTGGCTACCACCAGCATGCCAAGCCTGGTG > 1:169507/1‑58 CCTGAGCTTCGACCAGATCGGCAAGGCCCTGGCTACCACCAGCATGCCAAGCCTGGTG < 2:169507/58‑1 CCTGAGCTTCGACCAGATCGGCAAGGCCCTGGCTACCACCAGAATGCCAAGCCTGGTGGCCCAGCTGGGCCTGGGCATGATGCTGGTTGGCCTGGCCTTCAAGCTGTCGCTGGTACCGTTCCATCTGTGGACCCCGGACGTGTACGAAG > 1:96460/1‑149 CTGAGCTTCGACCAGATCGGCAAGGCCCTGGCTACCACCAGCATGCCAAGCCTGGTGGCCCAGCTGGGCCTGGGCATGATGCTGTTTGGCCTGGCCTGCAAGCTGTCGCTGGTACCGTTCCATGTGTGGCCCCCGGACGTGTACGtcgg > 8:289285/1‑145 GCCAACCAGCATCATGCCCAGGCCCAGCTGGGCCACCAGGCTTGGCATGCTGGTGGTAGCCAGGGCCTTGCCGATCTGGTCGAAGCTCAGGCTGCCGGCGTCGGCGTACAGCAGGGCCATGCCGAACAGCAGGAAAGCCGAGCCTGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4670319‑4670169‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccTGAGCTTCGACCAGATCGGCAAGGCCCTGGCTACCACCAGCATGCCAAGCCTGGTGGCCCAGCTGGGCCTGGGCATGATGCTGGTTGGCCTGGCCTTCAAGCTGTCGCTGGTACCGTTCCATCTGTGGACCCCGGACGTGTACGAAGG > NC_002947/4670231‑4670378 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |