New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4837742	54 (0.830)	3 (0.050)	3/252	NT	5.4%	coding (311/609 nt)	ccoO‑I	cbb3‑type cytochrome c oxidase subunit
	?	NC_002947	= 4837792	54 (0.870)					coding (361/609 nt)	ccoO‑I	cbb3‑type cytochrome c oxidase subunit

TCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4837632‑4837742 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcacGGTGCCAGTCGTCCGAGTAGCGGCCACCGACTCGGGCCAGGTCCGGCCCAGTGCGCTTGGAGCCCCACAGGAACGGGTGGTCCCACACGCTTTCACCGGCCACCGAGTAGTGGCCGTAACGCTCGGTTTCGGCGCGGAACGGGCGGA  <  NC_002947/4837792‑4837646                                                                                                                                                                                                                                                                    TCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACGGTGCCAGTCGTCCGAGTAGCGGCCACCGACTCGGGC                                                                                                                >  1:106663/1‑148                     CGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACGGTGCCAGTCGTCCGAGTAGCGGCCACCGACTCGGGCCAGGTCCGGCCCAGTGCGCTT                                                                                           <  1:160997/149‑1                      GTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACGGTGCCAGTCGTCCGAGTAGCGGCCACCGACTCGGGCCAGGTCCGGCCCAGTGCGCTTG                                                                                          <  2:106663/149‑1                                                                                                          GCGCACGGTGCCAGTCGTCCGAGTAGCGGCCACCGACTCGGGCCAGGTCCGGCCCAGTGCGCTTGGAGCCCCACAGGAACGGGTGGTCCCACACGCTTTCACCGGCCACCGAGTAGTGGCCGTAACGCTCGGTTTCGGCGCGGAACGGG      <  7:219476/149‑1                                                                                                             CACGGTGCCAGTCGTCCGAGTAGCGGCCACCGACTCGGGCCAGGTCCGGCCCAGTGCGCTTGGAGCCCCACAGGAACGGGTGGTCCCACACGCTTTCACCGGCCACCGAGTAGTGGCCGTAACGCTCGGTTTCGGCGCGGAACGGGCG    >  1:68095/1‑148                                                                                                              ACGGTGCCAGTCGTCCGAGTAGCGGCCACCGACTCGGGCCAGGTCCGGCCCAGTGCGCTTGGAGCCCCACAGGAACGGGTGGTCCCACACGCTTTCACCGGCCACCGAGTAGTGGCCGTAACGCTCGGTTTCGGCGCGGAACGGGCGGA  <  2:153133/149‑1                                                                                                                                                                                                                                                                    TCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4837632‑4837742 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcacGGTGCCAGTCGTCCGAGTAGCGGCCACCGACTCGGGCCAGGTCCGGCCCAGTGCGCTTGGAGCCCCACAGGAACGGGTGGTCCCACACGCTTTCACCGGCCACCGAGTAGTGGCCGTAACGCTCGGTTTCGGCGCGGAACGGGCGGA  <  NC_002947/4837792‑4837646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.