New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4837742	54 (0.830)	3 (0.050)	3/252	NT	5.4%	coding (311/609 nt)	ccoO‑I	cbb3‑type cytochrome c oxidase subunit
	?	NC_002947	= 4837792	54 (0.870)					coding (361/609 nt)	ccoO‑I	cbb3‑type cytochrome c oxidase subunit

CGCGATGTCTACATCCGCGAAGGTTGCGTGGGCTGTCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTGGTTGCCCAGCCGGTCGACAACAGCCACACCGA  >  NC_002947/4837597‑4837889                                                                                                                                                  |                                                                                                                                                    cgcgATGTCTACATCCGCGAAGGTTGCGTGGGCTGTCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTgg                                                                                                                                                  >  2:11217/1‑149 (MQ=255) cgcgATGTCTACATCCGCGAAGGTTGCGTGGGCTGTCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCAAAGAGCACTgg                                                                                                                                                  >  8:280478/1‑149 (MQ=255)        tCTACATCCGCGAAGGTTGCGTGGGCTGTCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGAc                                                                                                                                           >  7:140092/1‑149 (MQ=255)          tACATCCGCGAAGGTTGCGTGGGCTGTCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCt                                                                                                                                         >  6:149900/1‑149 (MQ=255)             aTCCGCGAAGGTTGCGTGGGCTGTCACTCGCCGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGc                                                                                                                                      >  4:79944/1‑149 (MQ=255)                cgcgAAGGTTGCGTGGGCTGTCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGccc                                                                                                                                    <  8:140092/148‑1 (MQ=255)                        ttGCGTGGGCTGTCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTg                                                                                                                           <  4:255020/149‑1 (MQ=255)                          gCGTGGGCTGTCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGAc                                                                                                                                           <  5:56675/131‑1 (MQ=255)                          gCGTGGGCTGTCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGAc                                                                                                                                           >  6:56675/1‑131 (MQ=255)                           cGTGGGCTGTCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGcc                                                                                                                        >  8:300807/1‑149 (MQ=255)                           cGTGGGCTGTCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGc                                                                                                                         <  8:206589/148‑1 (MQ=255)                            gTGGGCTGTCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGcca                                                                                                                       <  8:147756/149‑2 (MQ=255)                              gggCTGTCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGc                                                                                                                      >  8:25084/1‑148 (MQ=255)                                    tCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACggtgccagtcgtccgagtagcggccaccgactcgggc                                                                                                                >  1:106663‑M1/1‑111 (MQ=255)                                    tCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCg                                                                                                                <  5:378291/148‑1 (MQ=255)                                     cACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGga                                                                                                              >  3:20046/1‑149 (MQ=255)                                          gCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACAACt                                                                                                         >  6:43480/1‑149 (MQ=255)                                             gatgatCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTgg                                                                                                       >  7:155791/1‑148 (MQ=255)                                             gatgatCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGc                                                                                                      <  5:83666/149‑1 (MQ=255)                                                gatCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCAcc                                                                                                   >  6:166843/1‑149 (MQ=255)                                                  tCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCgt                                                                                                 <  2:153133‑M2/149‑3 (MQ=255)                                                    cGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCgtg                                                                                                >  1:68095‑M2/1‑145 (MQ=255)                                                      cccGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCgtgcgc                                                                                             <  7:219476‑M2/149‑7 (MQ=255)                                                        cGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACggtgccagtcgtccgagtagcggccaccgactcgggccaggtccggcccagtgcgctt                                                                                           <  1:160997‑M1/149‑59 (MQ=255)                                                         gTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACggtgccagtcgtccgagtagcggccaccgactcgggccaggtccggcccagtgcgcttg                                                                                          <  2:106663‑M1/149‑60 (MQ=255)                                                             cgcgCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCTTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGt                                                                                       <  7:275597/148‑1 (MQ=255)                                                             cgcgCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTa                                                                                      <  1:153133/149‑1 (MQ=255)                                                                        cGAGCGTTTCGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCgcgc                                                                            >  3:379259/1‑148 (MQ=255)                                                                          aGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTAc                                                                                                                   >  4:20290/1‑107 (MQ=255)                                                                          aGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTAc                                                                                                                   <  3:20290/107‑1 (MQ=255)                                                                           gCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACg                                                                        <  1:11217/149‑1 (MQ=255)                                                                             gTTACGGCCACTACTCCGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACgtg                                                                      <  7:300807/149‑1 (MQ=255)                                                                                  ggCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGcc                                                                 <  4:148143/149‑1 (MQ=255)                                                                                      actaatCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAg                                                             >  5:134740/1‑149 (MQ=255)                                                                                       ctactCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGt                                                            <  7:154547/149‑1 (MQ=255)                                                                                          ctCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGa                                                              <  6:401491/144‑1 (MQ=255)                                                                                          ctCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGa                                                              >  5:401491/1‑144 (MQ=255)                                                                                              gTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGAt                                                     >  4:392056/1‑149 (MQ=255)                                                                                              gTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGAt                                                     >  4:385873/1‑149 (MQ=255)                                                                                                   cGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGt                                                >  2:115826/1‑149 (MQ=255)                                                                                                    ggTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTc                                               <  8:345496/149‑1 (MQ=255)                                                                                                      tGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTACGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTcc                                              >  1:166838/1‑148 (MQ=255)                                                                                                         aaGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTAcc                                          <  6:66560/149‑1 (MQ=255)                                                                                                            cGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGt                                       >  4:94367/1‑149 (MQ=255)                                                                                                                    accaccCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTGGtt                               <  7:25084/149‑1 (MQ=255)                                                                                                                       accCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGCGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTGGTTGcc                            >  5:176855/1‑149 (MQ=255)                                                                                                                            ttCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTGGTTGCCCAGcc                       <  4:20046/149‑1 (MQ=255)                                                                                                                                  tgGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTGGTTGCCCAGCCGGTCGa                 <  6:145244/149‑1 (MQ=255)                                                                                                                                   ggggCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTGGTTGCCCAGc                        <  6:133592/141‑1 (MQ=255)                                                                                                                                   ggggCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTGGTTGCCCAGc                        >  5:133592/1‑141 (MQ=255)                                                                                                                                    gggCTCCAAGCGCACTGGGCCGTACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTGGTTGCCCAGCCGGTCGac                <  3:79944/148‑1 (MQ=255)                                                                                                                                      gCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTGGTTGCCCAGCCgg                     >  3:394298/1‑141 (MQ=255)                                                                                                                                      gCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTGGTTGCCCAGCCgg                     <  4:394298/141‑1 (MQ=255)                                                                                                                                       cTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGc                                    <  1:223350/125‑1 (MQ=255)                                                                                                                                       cTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGc                                    >  2:223350/1‑125 (MQ=255)                                                                                                                                       cTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTGGTTGCCCAGCCGGTCGacaaca            <  5:149900/149‑1 (MQ=255)                                                                                                                                        tCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTAACCGTGGCTGGTTGCCCAGCCGGTCGACAACAg           >  4:251481/1‑149 (MQ=255)                                                                                                                                          cAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCgtgcgcttggagccccacaggaacgggtggtcccacacgctttcaccggccaccgagtagtggccgtaacgctcggtttcggcgcggaac         <  2:106663‑M2/149‑91 (MQ=255)                                                                                                                                          cAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTGGTTGCCCAGCCGGTCGACAACAGc          <  8:155791/148‑1 (MQ=255)                                                                                                                                           aaGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCgtgcgcttggagccccacaggaacgggtggtcccacacgctttcaccggccaccgagtagtggccgtaacgctcggtttcggcgcggaacg        <  1:160997‑M2/149‑92 (MQ=255)                                                                                                                                           aaGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTgg                                 <  3:118267/124‑1 (MQ=255)                                                                                                                                           aaGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTgg                                 >  4:118267/1‑124 (MQ=255)                                                                                                                                             gcgcACggtgccagtcgtccgagtagcggccaccgactcgggccaggtccggcccagtgcgcttggagccccacaggaacgggtggtcccacacgctttcaccggccaccgagtagtggccgtaacgctcggtttcggcgcggaacggg      <  7:219476‑M1/149‑144 (MQ=255)                                                                                                                                             gcgcACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGt                                       <  4:246100/116‑1 (MQ=255)                                                                                                                                             gcgcACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGt                                       >  3:246100/1‑116 (MQ=255)                                                                                                                                              cgcACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTGGTTGCCCAGCCGGTCGACAACAGCCacac     <  5:166843/149‑1 (MQ=255)                                                                                                                                               gcACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTGGTTGCCCAGCCGGTCGACAACAGCCACAcc    >  2:280499/1‑149 (MQ=255)                                                                                                                                                cACggtgccagtcgtccgagtagcggccaccgactcgggccaggtccggcccagtgcgcttggagccccacaggaacgggtggtcccacacgctttcaccggccaccgagtagtggccgtaacgctcggtttcggcgcggaacgggcg    >  1:68095‑M1/1‑3 (MQ=255)                                                                                                                                                 aCggtgccagtcgtccgagtagcggccaccgactcgggccaggtccggcccagtgcgcttggagccccacaggaacgggtggtcccacacgctttcaccggccaccgagtagtggccgtaacgctcggtttcggcgcggaacgggcgga  <  2:153133‑M1/149‑148 (MQ=255)                                                                                                                                                 aCTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACACCCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTGGTTGCCCAGCCGGTCGACAACAGc          <  8:51079/141‑1 (MQ=255)                                                                                                                                                 aCTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACACCCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTGGTTGCCCAGCCGGTCGACAACAGc          >  7:51079/1‑141 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CGCGATGTCTACATCCGCGAAGGTTGCGTGGGCTGTCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACCGAGCGTTACGGCCACTACTCGGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGCTCCAAGCGCACTGGGCCGGACCTGGCCCGAGTCGGTGGCCGCTACTCGGACGACTGGCACCGTGCGCACCTGTACAACCCGCGCAACGTGGTGCCGGAGTCGAAGATGCCGTCCTACCCGTGGCTGGTTGCCCAGCCGGTCGACAACAGCCACACCGA  >  NC_002947/4837597‑4837889

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.