New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4845076	62 (0.950)	3 (0.050)	3/254	NT	5.5%	coding (493/531 nt)	PP_4260	hypothetical protein
	?	NC_002947	= 4845104	44 (0.700)					coding (521/531 nt)	PP_4260	hypothetical protein

CTGAGCCGGGTCGAAGCAGGGCGCTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAAGGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4844926‑4845076 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttggTGTTCGGCGCCTTGCAGGGCTTCGTCACCCAACTGCAAGGTCACACCATGCGCCACTTTTTCCTCTTCGAACAGGCGCCATACCTGGCCCCCTTCGCTACCCAGCAGTTCGACAAAACGGCGCCCGTCAACCTTGTCTTCCAGCTGCC  <  NC_002947/4845104‑4844957                                                                                                                                                                                                                                                                                                             CTGAGCCGGGTCGAAGCAGGGCGCTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAAGGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTT                                                                                                                                                        >  7:158157/1‑149    atCCGGGTCGAAGCAGGGCGCTATGTGTGGCAGCTGGAAGACAAGGTTGAAGGGCGCCGTTTTGTCTAACTTCTGGGTAGCGAAGGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGG                                                                                                                                                      <  3:54547/146‑1    AGCCGGGTCGAAGCAGGGCGCTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAAGGGGGCCAGGTATGGCGCCTGTTCGAAGAGGTAAAAGTGGCGCATGGTGTGACCTTGCAGTTGG                                                                                                                                                      <  1:389701/148‑1    AGCCGGGTCGAAGCAGGGCGCTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAAGGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGG                                                                                                                                                      <  4:93391/148‑1    AGCCGGGTCGAAGCAGGGCGCTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAAGGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGG                                                                                                                                                      <  8:77304/148‑1                                 GCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAAGGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGTGTTCGGCGCCTTGCAGGGCTTCGTCACCC                                                                                                                        <  3:7504/149‑1                                              AAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAAGGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGTGTTCGGCGCCTTGCAGGGCTTCGTCACCCAACTGCAAG                                                                                                               >  5:264423/1‑145                                              AAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAAGGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGTGTTCGGCGCCTTGCAGGGCTTCGTCACCCAACTGCAAG                                                                                                               <  6:264423/145‑1                                                                                                                                                    TTGGTGTTCGGCGCCTTGCAGGGCTTCGTCACCCAACTGCAAGGTCACACCATGCGCCACTTTTTCCTCTTCGAACAGGCGCCATACCTGGCCCCCTTCGCTACCCAGCAGTTCGACAAAACGGCGCCCGTCAACCTTGTCTTCCAGCT     <  2:326664/149‑1                                                                                                                                                    TTGGTGTTCGGCGCCTTGCAGGGCTTCGTCACCCAACTGCAAGGTCACACCATGCGCCACTTTTTCCTCTTCGAACAGGCGCCATACCTGGCCCCCTTCGCTACCCAGCAGTTCGACAAAACGGCGCCCGTCAACCTTGTCTTCCAGCT     <  5:153538/149‑1                                                                                                                                                    TTGGTGTTCGGCGCCTTGCAGGGCTTCGTCACCCAACTGCAAGGTCACACCATGCGCCACTTTTTCCTCTTCGAACAGGCGCCATACCTGGCCCCCTTCGCTACCCAGCAGTTCGACAAAACGGCGCCCGTCAACCTTGTCTTCCAGCT     >  8:231948/1‑149                                                                                                                                                      GGTGTTCGGCGCCTTGCAGGGCTTCGTCACCCAACTGCAAGGTCACACCATGCGCCACTTTTTCCTCTTCGAACAGGCGCCATACCTGGCCCCCTTCGCTACCCAGCAGTTCGACAAAACGGCGCCCGTCAACCTTGTCTTCCAGCTGC   >  2:100576/1‑149                                                                                                                                                       GTGTTCGGCGCCTTGCAGGGCTTCGTCACCCAACTGCAAGGTCACACCATGCGCCACTTTTTCCTCTTCGAACAGGCGCCATACCTGGCCCCCTTCGCTACCCAGCAGTTCGACAAAACGGCGCCCGTCAACCTTGTCTTCCAGCTGCC  <  4:216559/149‑1                                                                                                                                                                                                                                                                                                             CTGAGCCGGGTCGAAGCAGGGCGCTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAAGGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4844926‑4845076 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttggTGTTCGGCGCCTTGCAGGGCTTCGTCACCCAACTGCAAGGTCACACCATGCGCCACTTTTTCCTCTTCGAACAGGCGCCATACCTGGCCCCCTTCGCTACCCAGCAGTTCGACAAAACGGCGCCCGTCAACCTTGTCTTCCAGCTGCC  <  NC_002947/4845104‑4844957

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.