New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4845076	62 (0.950)	3 (0.050)	3/254	NT	5.5%	coding (493/531 nt)	PP_4260	hypothetical protein
	?	NC_002947	= 4845104	44 (0.700)					coding (521/531 nt)	PP_4260	hypothetical protein

AGCCGGGTCGAAGCAGGGCGCTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAGGCAAAGGTATTTCCAGGTCTGACGCATTCGCGGGCGCGCCCGCTCCCACAGGGTTTC  >  NC_002947/4844929‑4845224                                                                                                                                                      |                                                                                                                                                     atccggGTCGAAGCAGGGCGCTATGTGTGGCAGCTGGAAGACAAGGTTGAAGGGCGCCGTTTTGTCTAACTTCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGG                                                                                                                                                      <  3:54547‑M1/146‑1 (MQ=255) aGCGGGGTCGTAGGAGGGCTCTATGTGGGGCAGCTGGTATACATGGTTGAGGTGCGACGTTTTGTCGTTCTGCTGGGTAGCGAA‑‑GGGGGCCAGGTTTGGAGCATGTTCGAAGAGGAAAAAGTGGAGCATGGTGTGACCTTGCAGTTgg                                                                                                                                                      <  8:147198/148‑1 (MQ=255) aGCCGGGTCGAAGCAGGGCGCTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGTAAAAGTGGCGCATGGTGTGACCTTGCAGTTGG                                                                                                                                                      <  1:389701‑M1/148‑1 (MQ=255) aGCCGGGTCGAAGCAGGGCGCTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGG                                                                                                                                                      <  4:93391‑M1/148‑1 (MQ=255) aGCCGGGTCGAAGCAGGGCGCTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGG                                                                                                                                                      <  8:77304‑M1/148‑1 (MQ=255)  gCCGGGTCGAAGCAGGGCGCTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGt                                                                                                                                                    <  8:158157/149‑1 (MQ=255)   ccGGGTCGAAGCAGGGCGCTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGt                                                                                                                                                    >  8:208058/1‑148 (MQ=255)          gAAGCAGGGCGCTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGc                                                                                                                                            >  1:138727/1‑149 (MQ=255)           aaGCAGGGCGCTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGcc                                                                                                                                           >  3:15109/1‑149 (MQ=255)              cAGGGCGCTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTg                                                                                                                                        <  6:22752/149‑1 (MQ=255)               aGGGCGCTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGc                                                                                                                                       <  5:128399/149‑1 (MQ=255)                  gcgcTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAg                                                                                                                                    <  3:213961/149‑1 (MQ=255)                    gcTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGgc                                                                                                                                  <  7:208058/149‑1 (MQ=255)                       aTGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAAGGGGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGAAGTTGGGTGACGAAGCCCTGCAAGgcg                                                                                                                                 >  1:325400/1‑149 (MQ=255)                       aTGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGcc                                                                                                                               >  8:262616/1‑149 (MQ=255)                        tgtgGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGCAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCg                                                                                                                              <  6:7536/149‑1 (MQ=255)                         gtgGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCg                                                                                                                              >  8:375455/1‑148 (MQ=255)                            gggCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGaa                                                                                                                            <  7:11466/147‑1 (MQ=255)                            gggCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGaa                                                                                                                            >  8:11466/1‑147 (MQ=255)                            gggCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAaca                                                                                                                          <  8:226233/149‑1 (MQ=255)                            gggCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAaca                                                                                                                          <  3:169174/149‑1 (MQ=255)                             ggCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACAc                                                                                                                         <  4:216559‑M2/149‑2 (MQ=255)                              gCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGtgttcggcgccttgcagggcttcgtcaccc                                                                                                                        <  3:7504‑M1/149‑31 (MQ=255)                              gCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACAcc                                                                                                                        >  2:100576‑M2/1‑147 (MQ=255)                                aGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACAccaa                                                                                                                      >  8:231948‑M2/1‑145 (MQ=255)                                aGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACAccaa                                                                                                                      <  2:326664‑M2/149‑5 (MQ=255)                                aGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACAccaa                                                                                                                      <  5:153538‑M2/149‑5 (MQ=255)                                    ggAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAg                                                                                                                   >  4:219148/1‑148 (MQ=255)                                     gAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTa                                                                                                                 <  1:326664/149‑1 (MQ=255)                                       aGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAg                                                                                                                >  4:111828/1‑148 (MQ=255)                                           aaGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGtgttcggcgccttgcagggcttcgtcacccaactgcaag                                                                                                               >  5:264423‑M1/1‑106 (MQ=255)                                           aaGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGtgttcggcgccttgcagggcttcgtcacccaactgcaag                                                                                                               <  6:264423‑M1/145‑40 (MQ=255)                                           aaGGTTGACGGGCGCCGTTTTGTCGAACTGCT‑GGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGgc                                                                                                                                  <  3:243094/125‑1 (MQ=255)                                           aaGGTTGACGGGCGCCGTTTTGTCGAACTGCT‑GGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGgc                                                                                                                                  >  4:243094/1‑125 (MQ=255)                                            aGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAacac                                                                                                          <  1:80847/149‑1 (MQ=255)                                             ggTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACAcc                                                                                                         >  2:125596/1‑149 (MQ=255)                                              gTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGGCGAACACCAACAGTAGCAACACCg                                                                                                        <  2:384277/149‑1 (MQ=255)                                                        gcCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCt                                                                                               >  5:33034/1‑148 (MQ=255)                                                        gcCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCt                                                                                               <  6:33034/148‑1 (MQ=255)                                                         ccGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCtgt                                                                                             <  2:59895/149‑1 (MQ=255)                                                         ccGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCtgt                                                                                             <  3:216559/149‑1 (MQ=255)                                                           gTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTgg                                                                                           <  7:375455/149‑1 (MQ=255)                                                           gTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTgg                                                                                           <  5:94412/149‑1 (MQ=255)                                                           gTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTgg                                                                                           <  8:37179/149‑1 (MQ=255)                                                                 tCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCgg                                                                                     >  7:363306/1‑149 (MQ=255)                                                                      ctgctgGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACg                                                                                <  7:262616/149‑1 (MQ=255)                                                                           gggTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCGCGCCcgc                                                                           >  6:265543/1‑149 (MQ=255)                                                                            ggTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCcgc                                                                           >  3:362471/1‑148 (MQ=255)                                                                             gTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGa                                                                         <  2:325400/149‑1 (MQ=255)                                                                               aGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAAt                                                                       >  7:31810/1‑149 (MQ=255)                                                                                   aa‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCTAATCCCTGTGGGAGCGGGCACGCCCGCGATTTCGa                                                                   <  4:15109/149‑1 (MQ=255)                                                                                   aa‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGa                                                                   <  8:68464/149‑1 (MQ=255)                                                                                   aa‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCCGGAATGGGa                                                                   >  3:289472/1‑149 (MQ=255)                                                                                          ggCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACTGTAGCAACACCGCa                                                                                                      <  2:395153/109‑1 (MQ=255)                                                                                          ggCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCa                                                                                                      >  1:395153/1‑109 (MQ=255)                                                                                           gCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCggg                                                                                    >  4:176051/1‑126 (MQ=255)                                                                                           gCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCggg                                                                                    <  3:176051/126‑1 (MQ=255)                                                                                           gCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTc                                                             <  6:153538/149‑1 (MQ=255)                                                                                            ccAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCa                                                            <  2:138727/149‑1 (MQ=255)                                                                                             cAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAg                                                           >  5:83647/1‑149 (MQ=255)                                                                                                     gcgcCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTGGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAGGCAAAGGt                                                   <  8:363306/149‑1 (MQ=255)                                                                                                        ccTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAGGCAAAg                                                     <  1:200712/144‑1 (MQ=255)                                                                                                        ccTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAGGCAAAg                                                     >  2:200712/1‑144 (MQ=255)                                                                                                              cGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAGGCAAAGGTATTTCCAg                                           <  3:219148/148‑1 (MQ=255)                                                                                                                aaGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAGGCAAAGGTATTTCCAGGTc                                        >  6:369999/1‑149 (MQ=255)                                                                                                                            tGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAGGCAAAGGTATTTCCAGGTCTGACGCATTcgc                            <  3:111828/149‑1 (MQ=255)                                                                                                                              gggcATGGTGTGACCTTGGATTTGTGTTTAGAAGTACTGGAAGGCGCCGAACAGGAACAGTAGCAACACTGCAAATCGCTTTGGGAGCTGGAAAGCCCGCGAATGCGATAGCTCAGGCAAAGTTATTTCGATTTTTGACGGATTCGCgg                          <  6:83647/147‑1 (MQ=255)                                                                                                                                   tGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAGGCAAAGGTATTTCCAGGTCTGACGCATTCGCGGgcgcg                     >  1:67367/1‑149 (MQ=255)                                                                                                                                     gtgtGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAGGCAAAGGTATTTCCAGGTCTGACGCATTCGCGGgcgcgc                    <  4:362471/148‑1 (MQ=255)                                                                                                                                      tgtgACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAGGCaaa                                                      <  8:264557/113‑1 (MQ=255)                                                                                                                                      tgtgACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAGGCaaa                                                      >  7:264557/1‑113 (MQ=255)                                                                                                                                      tgtgACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAGGCAAAGGTATTTCCAGGTCTGACGCATTCGCGGGCGCGccc                  <  2:67367/149‑1 (MQ=255)                                                                                                                                        tgACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAGGCAAAGGTATTTCCAGGTCTGACGCATTCGCGGGCGCGCCCg                 <  3:183578/148‑1 (MQ=255)                                                                                                                                        tgACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAGGCAAAGGTATTTCCAGGTCTGACGCATTCGCGGGCGCGCCCGc                <  5:369999/149‑1 (MQ=255)                                                                                                                                          aCCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACTCCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGa                                                                   <  4:374501/96‑1 (MQ=255)                                                                                                                                          aCCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGa                                                                   >  3:374501/1‑96 (MQ=255)                                                                                                                                           ccTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAGGCAAAGGTATTTCCAGGTCTGACGCATTCGCGGGCGCGCCCGCTc              <  8:31810/148‑1 (MQ=255)                                                                                                                                            cTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACAccaactgcaaggtcacaccatgcgccactttttcctcttcgaacaggcgccatacctggcccccttcgctacccagcagttcgacaaaacggcgcccgtcaacctt                >  5:264423‑M2/1‑39 (MQ=255)                                                                                                                                            cTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACAccaactgcaaggtcacaccatgcgccactttttcctcttcgaacaggcgccatacctggcccccttcgctacccagcagttcgacaaaacggcgcccgtcaacctt                <  6:264423‑M2/145‑107 (MQ=255)                                                                                                                                                   ttGGtgttcggcgccttgcagggcttcgtcacccaactgcaaggtcacaccatgcgccactttttcctcttcgaacaggcgccatacctggcccccttcgctacccagcagttcgacaaaacggcgcccgtcaaccttgtcttccagct     >  8:231948‑M1/1‑4 (MQ=255)                                                                                                                                                   ttGGtgttcggcgccttgcagggcttcgtcacccaactgcaaggtcacaccatgcgccactttttcctcttcgaacaggcgccatacctggcccccttcgctacccagcagttcgacaaaacggcgcccgtcaaccttgtcttccagct     <  2:326664‑M1/149‑146 (MQ=255)                                                                                                                                                   ttGGtgttcggcgccttgcagggcttcgtcacccaactgcaaggtcacaccatgcgccactttttcctcttcgaacaggcgccatacctggcccccttcgctacccagcagttcgacaaaacggcgcccgtcaaccttgtcttccagct     <  5:153538‑M1/149‑146 (MQ=255)                                                                                                                                                     ggtgttcggcgccttgcagggcttcgtcacccaactgcaaggtcacaccatgcgccactttttcctcttcgaacaggcgccatacctggcccccttcgctacccagcagttcgacaaaacggcgcccgtcaaccttgtcttccagctgc   >  2:100576‑M1/1‑2 (MQ=255)                                                                                                                                                     gggTGACGAAGCCCTGCAAGGCGCCGAACAccaactgcaaggtcacaccatgcgccactttttcctcttcgaacaggcgccatacctggcccccttcgctacccagcagttcgacaaaacggcgcccgtcaaccttgtcttccagctgc   <  3:7504‑M2/149‑120 (MQ=255)                                                                                                                                                      gtgttcggcgccttgcagggcttcgtcacccaactgcaaggtcacaccatgcgccactttttcctcttcgaacaggcgccatacctggcccccttcgctacccagcagttcgacaaaacggcgcccgtcaaccttgtcttccagctgcc  <  4:216559‑M1/149‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                     AGCCGGGTCGAAGCAGGGCGCTATGTGGGGCAGCTGGAAGACAAGGTTGACGGGCGCCGTTTTGTCGAACTGCTGGGTAGCGAA‑‑GGGGGCCAGGTATGGCGCCTGTTCGAAGAGGAAAAAGTGGCGCATGGTGTGACCTTGCAGTTGGGTGACGAAGCCCTGCAAGGCGCCGAACACCAACAGTAGCAACACCGCAAATCCCTGTGGGAGCGGGCACGCCCGCGAATGCGATAGCTCAGGCAAAGGTATTTCCAGGTCTGACGCATTCGCGGGCGCGCCCGCTCCCACAGGGTTTC  >  NC_002947/4844929‑4845224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.