| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5441588 = | 74 (1.140) | 4 (0.060) | 4/258 | NT | 5.0% | coding (996/1653 nt) | PP_4780 | acyl‑CoA dehydrogenase |
| ? | NC_002947 | 5441618 = | 79 (1.240) | coding (966/1653 nt) | PP_4780 | acyl‑CoA dehydrogenase | |||||
ACGCGGCGTGCCGACCATCATCGAGATGGTCGCCATGACCCGGTTCGACTGCATGGTCGGCTCCAGCGCACTGATGCGCCAGGCGTTGACGCAGGCGGCCCACCATTGCGCGCATCGCAA‑GGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5441714‑5441588‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCT > NC_002947/5441618‑5441764 ACGCGGCGTGCCGACCATCATCGAGATGGTCGCCATGACCCGGTTCGACTGCATGGTCGGCTCCAGCGCACTGATGCGCCAGGCGTTGACGCAGGCGGCCCACCATTGCGCGCATCGCAA‑GGTCGGC < 5:220915/127‑1ACGCGGCGTGCCGACCATCATCGAGATGGTCGCCATGACCCGGTTCGACTGCATGGTCGGCTCCAGCGCACTGATGCGCCAGGCGTTGACGCAGGCGGCCCACCATTGCGCGCATCGCAA‑GGTCGGC > 6:220915/1‑127 ACGCAGGCGGCCCACCATTGCGCGCATCGCAA‑GGTCGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGA > 3:69804/1‑149 CAGGCGGCCCACCATTGCGCGCATCGCAA‑GGTCGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGTAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCC > 3:369831/1‑135 CAGGCGGCCCACCATTGCGCGCATCGCAA‑GGTCGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGTAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCC < 4:369831/135‑1 CACCATTGCGCGCATCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGC > 3:283813/1‑148 GCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCT > 3:136688/1‑149 ACGCGGCGTGCCGACCATCATCGAGATGGTCGCCATGACCCGGTTCGACTGCATGGTCGGCTCCAGCGCACTGATGCGCCAGGCGTTGACGCAGGCGGCCCACCATTGCGCGCATCGCAA‑GGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5441714‑5441588‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCT > NC_002947/5441618‑5441764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |