| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5555200 = | 73 (1.120) | 6 (0.100) | 5/246 | NT | 8.4% | coding (325/459 nt) | PP_4887 | hypothetical protein |
| ? | NC_002947 | 5555263 = | 63 (1.040) | coding (262/459 nt) | PP_4887 | hypothetical protein | |||||
CCGTTTCAATGTCGCCGATATCCACGGCTTCACTCGCGGCGATCCAATGCATGTGCCAGCCGTCGGTGAGCGCCTGGACTTCTTCACTGTCGAGACCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5555354‑5555200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatggtctCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAGGCCCGGGCCAGCCAGCCGGGGACGTCC > NC_002947/5555263‑5555408 CCGTTTCAATGTCGCCGATATCCACGGCTTCACTCGCGGCGATCCAATGCATGTGCCAGCCGTCGGTGAGCGCCTGGACTTCTTCACTGTCGAGACCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGA < 1:154183/149‑1 GTTTCAATGTCGCCGATATCCACGGCTTCACTCGCGGCGATCCAATGCATGTGCCAGCCGTCGGTGAGCGCCTGGACTTCTTCACTGTCGAGACCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATG < 2:313159/149‑1 TTTCAATGTCGCCGATATCCACGGCTTCACTCGCGGCGATCCAATGCATGTGCCAGCCGTCGGTGAGCGCCTGGACTTCTTCACTGTCGAGACCATCAGCGACCAGCAGCTGGTACTGACTTCGCGCGACACGCACTTGGCGGTGATGG > 8:372382/1‑149 AATGTCGCCGATATCCACGGCTTCACTCGCGGCGATCCAATGCATGTGCCAGCCGTCGGTGAGCGCCTGGACTTCTTCACTGTCGAGACCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCT < 7:386227/148‑1 GTCGCCGATATCCACGGCTTCACTCGCGGCGATCCAATGCATGTGCCAGCCGTCGGTGAGCGCCTGGACTTCTTCACTGTCGAGACCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGT > 1:294662/1‑143 GTCGCCGATATCCACGGCTTCACTCGCGGCGATCCAATGCATGTGCCAGCCGTCGGTGAGCGCCTGGACTTCTTCACTGTCGAGACCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGT < 2:294662/143‑1 ATGTGCCAGCCGTCGGTGAGCGCCTGGACTTCTTCACTGTCGAGACCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTC < 8:246690/104‑1 ATGTGCCAGCCGTCGGTGAGCGCCTGGACTTCTTCACTGTCGAGACCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTC < 5:327966/104‑1 ATGTGCCAGCCGTCGGTGAGCGCCTGGACTTCTTCACTGTCGAGACCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTC > 7:246690/1‑104 ATGTGCCAGCCGTCGGTGAGCGCCTGGACTTCTTCACTGTCGAGACCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTC > 6:327966/1‑104 GACCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTG > 4:33280/1‑148 GACCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTG > 6:341247/1‑148 CCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAA > 3:389150/1‑149 TCAGCGACCAGCAGCTGGT‑CTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGC > 2:378715/1‑149 ACTTCGCGCGACACGCACTTGGCGGTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGC < 3:33280/148‑1 CGCGCGACACGCACTTGGCGGTGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAA < 5:341247/148‑1 TGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAG < 6:163168/128‑1 TGATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAG > 5:163168/1‑128 GATGGTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATAGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAGGCCCGGGCCAGCCAGCCGGGGA > 8:320083/1‑149 GTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATA > 4:355610/1‑105 GTCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATA < 3:355610/105‑1 TCTCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAGGCCCGGGCCAGCCAGCCGGGGACGTCC > 5:396589/1‑149 TCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAGGCCCGGGCCAGCCAGCCGGGGACGTCC > 8:308610/1‑147 CCGTTTCAATGTCGCCGATATCCACGGCTTCACTCGCGGCGATCCAATGCATGTGCCAGCCGTCGGTGAGCGCCTGGACTTCTTCACTGTCGAGACCATCAGCGACCAGCAGCTGGTGCTGACTTCGCGCGACACGCACTTGGCGGTGATGGTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5555354‑5555200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatggtctCGACAGTGAAGAAGTCCAGGCGCTCACCGACGGCTGGCACATGCATTGGATCGCCGCGAGTGAAGCCGTGGATATCGGCGACATTGAAACGGCGTGAGATAAAGTCGCGAATGCGGAAGGCCCGGGCCAGCCAGCCGGGGACGTCC > NC_002947/5555263‑5555408 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |