| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5671615 = | 35 (0.540) | 5 (0.090) | 5/216 | NT | 15.0% | intergenic (+34/‑136) | PP_4978/PP_4979 | hypothetical protein/substrate‑binding protein |
| ? | NC_002947 | 5671700 = | 28 (0.530) | intergenic (+119/‑51) | PP_4978/PP_4979 | hypothetical protein/substrate‑binding protein | |||||
AGCAGGATCCAGAACAGACGGGCGATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGA‑‑ACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5671785‑5671615‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcacgcccgctcccacaTCGATAATGCA‑TGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCTGGTAACCGACGACTG > NC_002947/5671700‑5671845 AGCAGGATCCAGAACAGACGGGCGATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGA‑‑ACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTT > 7:271009/1‑149 GCAGGATCCAGAACAGACGGGCGATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGA‑‑ACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTC < 3:222615/149‑1 GATCCAGAACAGACGGGCGATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCACGA‑‑ACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGG < 5:366563/149‑1 GAACAGACGGGCGATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGA‑‑ACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGC < 8:94853/149‑1 AGACGGGCGATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGA‑‑ACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGC < 3:337080/149‑1 GGGCGATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGATCACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTC < 1:111042/149‑1 GGGCGATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGA‑‑ACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCC < 8:271009/149‑1 GCCCGCGA‑‑ACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACATCGATAATGCA‑TGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGA > 8:216367/1‑149 CCCGCGA‑‑ACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACATCGATAATGCA‑TGCCTTTACCGTACACCGGCCGAGC < 1:18108/105‑1 CCCGCGA‑‑ACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACATCGATAATGCA‑TGCCTTTACCGTACACAGGCCGAGC > 2:18108/1‑105 CCGCGA‑‑ACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACATCGATAATGCA‑TGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATC > 4:181282/1‑149 GCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACATCGATAATGCA‑TGCCTTTACCGTACACCGGGCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCT < 7:216367/149‑1 AACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCT < 5:165414/36‑1 AACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCT > 6:165414/1‑36 TCGCGGGCACGCCCGCTCCCACATCGATAATGCA‑TGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGTGAACGCTTG > 7:145666/1‑149 GCGGGCACGCCCGCTCCCACATCGATAATGCA‑TGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGC < 3:181282/148‑1 ACGCCCGCTCCCACATCGATAATGCAGTGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCTGG > 1:4960/1‑149 ACGCCCGCTCCCACATCGATAATGCA‑TGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGGTGGCTCTGGGCGAACGCTTGCGCCTGG > 4:263574/1‑148 CCGCTCCCACATCGATAATGCA‑TGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCTGGTAACC > 2:33131/1‑149 GCTCCCACATCGATAATGCA‑TGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCT > 5:325177/1‑140 GCTCCCACATCGATAATGCA‑TGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCT < 6:325177/140‑1 ACATCGATAATGCA‑TGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCTGGTAACCGACGACTG < 3:72152/149‑1 ACATCGATAATGCA‑TGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCTGGTAACCGACGACTG < 7:174467/149‑1 AGCAGGATCCAGAACAGACGGGCGATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGA‑‑ACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5671785‑5671615‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcacgcccgctcccacaTCGATAATGCA‑TGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCTGGTAACCGACGACTG > NC_002947/5671700‑5671845 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |