New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	317963 =	59 (0.910)	5 (0.080)	5/258	NT	7.1%	coding (1779/1815 nt)	PP_0264	sensor histidine kinase
	?	NC_002947	318058 =	73 (1.150)					coding (1684/1815 nt)	PP_0264	sensor histidine kinase

GCGACTACCTTGAGCCCGGCCAGGTCCAGGGTCTGGCTCAAGGCTTGGCGCAGGTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTGGGTGCGGGTCTTGGTGGTGA  >  NC_002947/317815‑318111                                                                                                                                                     |                                                                                                                                                       gcgACTACCTTGAGCCCGGCCAGGTCCAGGGTCTGGCTCAAGGCTTGGCGCAGGTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGGCGAGGGGTCATCCGAATTGGGCAATGTAgcg                                                                                                                                                        >  6:36164/1‑149 (MQ=255) ccgagcagcgtgatgactgcgtctacctgtacatccgtgacaacggcccccggcttcagccgccaggccctggagcacgccaaggagccgttcttcaccaccaagacccgcacccagggcctgggcctggggctggccatctgtgaaag                                                                                                                                                        <  1:100835‑M1/1‑1 (MQ=255)  ccgagcagcgtgatgactgcgtctacctgtacatccgtgacaacggccccggcttcagccgccaggccctggagcacgccaaggagccgttcttcaccaccaagacccgcacccagggcctgggcctggggctggccatctgtgaaaGc                                                                                                                                                       <  6:265369‑M1/2‑1 (MQ=255)  ccgagcagcgtgatgactgcgtctacctgtacatccgtgacaacggccccggcttcagccgccaggccctggagcacgccaaggagccgttcttcaccaccaagacccgcacccagggcctgggcctggggctggccatctgtgaaaGc                                                                                                                                                       >  1:382547‑M1/148‑149 (MQ=255)   gACTACCTTGAGCCCGGCCAGGTCCAGGGTCTGGCTCAAGGCTTGGCGCAGGTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAgcgc                                                                                                                                                       >  1:350301/1‑148 (MQ=255)   cgagcagcgtgatgactgcgtctacctgtacatccgtgacaacggccccggcttcagccgccaggccctggagcacgccaaggagccgttcttcaccaccaagacccgcacccagggcctgggcctggggctggccatctgtgaaaGcc                                                                                                                                                      <  7:159538‑M1/3‑1 (MQ=255)    aCTACCTTGAGCCCGGCCAGGTCCAGGGTCTGGCTCAAGGCTTGGCGCAGGTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCa                                                                                                                                                     <  4:79655/149‑1 (MQ=255)         cTTGAGCCCGGCCAGGTCCAGGGTCTGGCTCAAGGCTTGGCGCAGGTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGc                                                                                                                                                >  7:206331/1‑149 (MQ=255)         cTTGAGCCCGGCCAGGTCCAGGGTCTGGCTCAAGGCTTGGCGCAGCTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGc                                                                                                                                                >  1:286393/1‑149 (MQ=255)            gAGCCCGGCCAGGTCCAGGGTCTGGCTCAAGGCTTGGCGCAGGTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCgg                                                                                                                                              <  1:346114/148‑1 (MQ=255)            gAGCCCGGCCAGGTCCAGGGTCTGGCTCAAGGCTTGGCGCAGGTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCgg                                                                                                                                              <  2:193507/148‑1 (MQ=255)              gCCCGGCCAGGTCCAGGGTCTGGCTCAAGGCTTGGCGCAGGTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCa                                                                                                                                           >  1:23513/1‑149 (MQ=255)              gCCCGGCCAGGTCCAGGGTCTGGCTCAAGGCTTGGCGCAGGTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGAGCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCa                                                                                                                                           >  7:340445/1‑149 (MQ=255)               cccGGCCAGGTCCAGGGTCTGGCTCAAGGCTTGGCGCAGGTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCAc                                                                                                                                          <  3:255819/149‑1 (MQ=255)                  ggCCAGGTCCAGGGTCTGGCTCAAGGCTTGGCGCAGGTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGAGCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCg                                                                                                                                       >  1:404791/1‑149 (MQ=255)                           cAGGGTCTGGCTCAAGGCTTGGCGCAGGTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑Gga                                                                                                                              <  5:36164/148‑1 (MQ=255)                                  tGGCTCAAGGCTTGGCGCAGGTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGACTGTCGATCAGTGTCTCGGTGGTCGTGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAg                                                                                                                       >  7:231789/1‑148 (MQ=255)                                      tCAAGGCTTGGCGCAGGTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTg                                                                                                                  >  8:123963/1‑149 (MQ=255)                                      tCAAGGCTTGGCGCAGGTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTg                                                                                                                  >  8:285764/1‑149 (MQ=255)                                      tCAAGGCTTGGCGCAGGTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCAGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTg                                                                                                                  >  6:248033/1‑149 (MQ=255)                                          ggCTTGGCGCAGGTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTgcgc                                                                                                               >  4:196237/1‑148 (MQ=255)                                                      gTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGggtg                                                                                                 <  2:23513/149‑1 (MQ=255)                                                          gggTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTg                                                                                             <  2:350301/149‑1 (MQ=255)                                                           ggTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTgg                                                                                            >  5:377057/1‑149 (MQ=255)                                                            gTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCAc                                                                                                                                          >  3:138025/1‑104 (MQ=255)                                                            gTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCAc                                                                                                                                          >  3:132067/1‑104 (MQ=255)                                                            gTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCAc                                                                                                                                          <  4:132067/104‑1 (MQ=255)                                                            gTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCAc                                                                                                                                          <  4:138025/104‑1 (MQ=255)                                                                   tCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTg                                                                                             <  7:78473/140‑1 (MQ=255)                                                                   tCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTg                                                                                             >  8:78473/1‑140 (MQ=255)                                                                     cagcaGGTTGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGGCGAGGGGTCCTCCGAATTGGGCAAAGTTCCGCCAGATGCGGCCACGCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGTTTGGCcagcagca                                                                                   <  1:126843/145‑1 (MQ=255)                                                                       ccaGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGtt                                                                                >  5:97187/1‑149 (MQ=255)                                                                                ccTGGGCTCGGCTGGCGATCAGTGGCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCa                                                                       <  4:329968/149‑1 (MQ=255)                                                                                 caaggagccgttcttcaccaccaagacccgcacccagggcctgggcctggggctggccatctgtgaaaGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAg                                                                      <  5:32450‑M1/81‑1 (MQ=255)                                                                                      cTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGgcgc                                                                 <  6:97187/149‑1 (MQ=255)                                                                                       tCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGgcgcg                                                                >  5:165990/1‑149 (MQ=255)                                                                                         ggCTGTCGATCAGTGTCTCTGTGGTGATTCCGAGGGGTCCTCCGAATTGTTCAAAGTAGCGCCAGATGCGGGCACCCGCATCT‑TTAGAGTCATCATTTCGCC‑ACCTTCCGGGTGGTTGGCCATCAGCAGTTCACCGACCAGGGCGCTCa                                                              <  4:391374/149‑1 (MQ=255)                                                                                         ggCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCa                                                              >  2:366563/1‑149 (MQ=255)                                                                                           cTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATc                                                            <  8:114292/149‑1 (MQ=255)                                                                                            tGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGgc                                                                   >  8:286004/1‑141 (MQ=255)                                                                                            tGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGgc                                                                   <  7:286004/141‑1 (MQ=255)                                                                                              tCGATCCGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCa                                                           <  8:340445/147‑1 (MQ=255)                                                                                              tCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAgg                                                         >  7:125259/1‑149 (MQ=255)                                                                                                caccaccaagacccgcacccagggcctgggcctggggctggccatctgtgaaaGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCCCACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAgg                                                         >  1:105617‑M1/54‑148 (MQ=255)                                                                                                 aTCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCtt                                                      <  1:366563/149‑1 (MQ=255)                                                                                                  tCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCttt                                                     <  1:207465/149‑1 (MQ=255)                                                                                                  tCAGTGTCTCGGTGGTCATGCAGAGGGTTACTCAGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCGGCT‑GGAGAGGCAGCATTGCGCC‑ACGGTCCGGGGGGGTGGGCAGCAGCAGTTGCCCGGCGAGGGGGCGGATCAGGCttt                                                     >  6:316950/1‑149 (MQ=255)                                                                                                   cAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCttt                                                     >  7:318854/1‑148 (MQ=255)                                                                                                    accaagacccgcacccagggcctgggcctggggctggccatctgtgaaaGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTca                                                   >  6:32450‑M1/50‑149 (MQ=255)                                                                                                    aGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTca                                                   <  3:330847/149‑1 (MQ=255)                                                                                                    aGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTca                                                   <  3:196237/149‑1 (MQ=255)                                                                                                      caagacccgcacccagggcctgggcctggggctggccatctgtgaaaGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTca                                                   <  5:414478‑M1/100‑1 (MQ=255)                                                                                                         gacccgcacccagggcctgggcctggggctggccatctgtgaaaGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGAt                                              >  6:414478‑M1/45‑149 (MQ=255)                                                                                                                   gtGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGccc                                     <  8:231789/147‑1 (MQ=255)                                                                                                                         aGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCcccaggccc                              >  6:76008/1‑149 (MQ=255)                                                                                                                         aGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCcccaggcc                               >  5:311407/1‑148 (MQ=255)                                                                                                                            ggTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAACcccaggcccagg                           >  5:165096/1‑149 (MQ=255)                                                                                                                                ctccGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCt                       <  8:33756/149‑1 (MQ=255)                                                                                                                                 tccGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCCGGTGCTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCATg                      >  5:126575/1‑149 (MQ=255)                                                                                                                                  ccGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCACTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTgg                     <  6:125650/149‑1 (MQ=255)                                                                                                                                   cGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTgg                     <  8:318854/148‑1 (MQ=255)                                                                                                                                   cGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTgg                     <  5:76008/148‑1 (MQ=255)                                                                                                                                   cGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTg                      <  7:123963/147‑1 (MQ=255)                                                                                                                                    gAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTGGGt                   >  7:209532/1‑149 (MQ=255)                                                                                                                                       ttGGGCTAAGTAGCGCCAGATGCGGCCACCCGGAGCT‑GGTGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCAATGATGGCCAGCCCCAGTCCCAGGCCCTGGGTGc                 <  6:126575/148‑1 (MQ=255)                                                                                                                                       ttGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCTGGGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTGGGTGc                 >  1:276388/1‑149 (MQ=255)                                                                                                                                        tGGGCAACGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTGGGTGCgg               <  7:5320/149‑1 (MQ=255)                                                                                                                                          ggCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTGGGTGCggg              <  1:207048/148‑1 (MQ=255)                                                                                                                                          ggCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTGGGTGCGGGt             >  2:74001/1‑149 (MQ=255)                                                                                                                                             aaaGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTGGGTGCGGGTCtt          <  1:74001/149‑1 (MQ=255)                                                                                                                                              aaGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGGGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCCTCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTGGGTGCGGGTCTtg         <  8:206331/149‑1 (MQ=255)                                                                                                                                                    cgcCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGGcctgggcctggggctg                <  2:36756/136‑5 (MQ=255)                                                                                                                                                    cgcCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTGGGTGCGGGTCTTGgtggtg   <  2:404791/149‑1 (MQ=255)                                                                                                                                                    cgcCAGATGCGGCCACCCGCAGCT‑GGAGAGACAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGGcctgggcctggggctg                >  1:36756/1‑132 (MQ=255)                                                                                                                                                     GCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTGGGTGCGGGTCTTGGTGGTGa  >  7:285764‑M1/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                       GCGACTACCTTGAGCCCGGCCAGGTCCAGGGTCTGGCTCAAGGCTTGGCGCAGGTGGGGGTCATCGTCCACCAGGATGACCTGGGCTCGGCTGTCGATCAGTGTCTCGGTGGTCATGCCGAGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCT‑GGAGAGTCAGCATTGCGCC‑ACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTGGGTGCGGGTCTTGGTGGTGA  >  NC_002947/317815‑318111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.