New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1932033	69 (1.060)	4 (0.060)	4/254	NT	5.5%	coding (501/636 nt)	rluA	bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA
	?	NC_002947	= 1932067	72 (1.150)					coding (467/636 nt)	rluA	bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA

CCCTGCAAAATCAGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGCCAGAAGGTCAGGGCGTGCTTGCCCTGCTCGTGGTCCACCA  >  NC_002947/1931888‑1932178                                                                                                                                                   |                                                                                                                                                   cccTGCAAAATCAGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCagcagc                                                                                                                                                 <  6:293322/149‑1 (MQ=255)    tGCAAAATAAGAACGCCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGT‑GGTAAAGCTCAGCAT‑CGAGCCATGCAGGCACAGCCGCTCAAGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGt                                                                                                                                            >  2:33230/1‑149 (MQ=255)      cAAAATCAGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGt                                                                                                                                            <  4:92016/148‑1 (MQ=255)       aaaaTCAGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCAAGCAGCG‑GGTGc                                                                                                                                          >  4:102866/1‑149 (MQ=255)        aaaTCAGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCTGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCTCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGcc                                                                                                                                         <  6:312260/149‑1 (MQ=255)        aaaTCAGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTg                                                                                                                                           <  5:170821/147‑1 (MQ=255)        aaaTCAGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTg                                                                                                                                           >  6:170821/1‑147 (MQ=255)         aaTCAGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGccc                                                                                                                                        <  6:56694/149‑1 (MQ=255)             aGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGAt                                                                                                                                     <  4:281966/148‑1 (MQ=255)             aGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGAt                                                                                                                                     <  6:38964/148‑1 (MQ=255)             aGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATc                                                                                                                                    <  5:351637/149‑1 (MQ=255)              gAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATc                                                                                                                                    >  7:96381/1‑148 (MQ=255)                aCGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCgc                                                                                                                                  >  7:83592/1‑147 (MQ=255)                     gcAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCAt                                                                                                                            <  2:224513/149‑1 (MQ=255)                     gcAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCAt                                                                                                                            >  1:224513/1‑149 (MQ=255)                       aGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCGCCCAGCAGCG‑GGTGCCCGATCGACAGCAtgt                                                                                                                          <  5:14940/149‑1 (MQ=255)                       aGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCAtgt                                                                                                                          <  2:299215/149‑1 (MQ=255)                              tCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCAcgcg                                                                                                                   >  5:258319/1‑149 (MQ=255)                               cGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCAcgcg                                                                                                                   >  5:242267/1‑148 (MQ=255)                                gAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCAcgcg                                                                                                                   >  1:149695/1‑147 (MQ=255)                                      cAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCtgcgcgtgcacatgctgtcgatcgggcacccgctgctgg                                                                                                             <  4:110548‑M1/148‑40 (MQ=255)                                       aaCCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGt                                                                                                           <  8:96381/148‑1 (MQ=255)                                       aaCCGCCGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTg                                                                                                          <  6:286618/149‑1 (MQ=255)                                        aCCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCGTGTGCACGCGCAGCTGGTGc                                                                                                         >  7:192456/1‑149 (MQ=255)                                          cGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAgct                                                                                                              <  1:72147‑M2/142‑4 (MQ=255)                                          cGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAgct                                                                                                              >  2:72147‑M2/1‑139 (MQ=255)                                           gCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGaa                                                                                                      >  7:325599/1‑149 (MQ=255)                                              gCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGc                                                                                                   <  8:325599/149‑1 (MQ=255)                                               cccGGACACCGGGTGGGTAAAGCTCAGCATCCGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGc                                                                                                   >  1:248211/1‑149 (MQ=255)                                               cccGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGcc                                                                                                  >  3:236144/1‑149 (MQ=255)                                                 cGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCg                                                                                                >  2:307402/1‑149 (MQ=255)                                                  ggACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCGTGGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCg                                                                                                <  1:293251/149‑1 (MQ=255)                                                  ggACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCgg                                                                                               >  3:157855/1‑149 (MQ=255)                                                    acacCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGTGCCGCCAGGGCTTGCGGGTTGGCGT‑‑‑‑TCG‑‑CA‑CCAGCtgcgcgtgcacatgctgtcgatcgggcacccgctgctgggtgatcgcctgtacgccaaccc                                                                                       <  2:251898‑M1/149‑62 (MQ=255)                                                    acacCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTa                                                                                             <  6:242267/149‑1 (MQ=255)                                                    acacCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTa                                                                                             <  6:258319/149‑1 (MQ=255)                                                       ccGGGTGGGTAAAGCTTAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATc                                                                                          <  4:71509/149‑1 (MQ=255)                                                           gtgggtAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGc                                                                                                                                          <  1:211238/97‑1 (MQ=255)                                                           gtgggtAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGc                                                                                                                                          >  2:211238/1‑97 (MQ=255)                                                                     cTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGa                                                                                                                                  <  4:211773/95‑1 (MQ=255)                                                                     cTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCAc                                                                            >  5:328920/1‑149 (MQ=255)                                                                      tCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCAcc                                                                           >  4:281211/1‑149 (MQ=255)                                                                        aGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCAccc                                                                          <  2:115012/148‑1 (MQ=255)                                                                        aGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCAcc                                                                           <  5:405442/147‑1 (MQ=255)                                                                        aGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCAcc                                                                           <  6:328920/147‑1 (MQ=255)                                                                               gAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGt                                                                    <  4:157855/148‑1 (MQ=255)                                                                                aGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGa                                                                  <  3:281211/149‑1 (MQ=255)                                                                                 ggCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCAtg                                                                                                                           <  4:288378/91‑1 (MQ=255)                                                                                 ggCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCAtg                                                                                                                           >  3:288378/1‑91 (MQ=255)                                                                                    aTGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCtgcgcgtgcacatgctgtcgatcgggcacccgctgctgggtgatc                                                                                                       <  4:195087‑M1/109‑46 (MQ=255)                                                                                    aTGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCtgcgcgtgcacatgctgtcgatcgggcacccgctgctgggtgatc                                                                                                       >  3:195087‑M1/1‑64 (MQ=255)                                                                                          gCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGACCGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGc                                                        >  2:377214/1‑149 (MQ=255)                                                                                            acaGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGt                                                      >  4:51880/1‑149 (MQ=255)                                                                                              aGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTc                                                    >  6:22054/1‑149 (MQ=255)                                                                                                ccGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCTATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCa                                                  <  4:12828/149‑1 (MQ=255)                                                                                                ccGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCa                                                  <  4:236144/149‑1 (MQ=255)                                                                                                   cTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGa                                               >  8:307140/1‑149 (MQ=255)                                                                                                      aTGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATa                                             <  1:33230/148‑1 (MQ=255)                                                                                                       tGGGCCGCCATGGCTTGCGGTTTGGCGTACAGGCGATCACCAAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGAGAAAGCCCGGTAATCGGCGTCAGCTACACACGACAGTGATCGCCGCAGAGTTCCACGATAct                                           >  4:282988/1‑148 (MQ=255)                                                                                                        gggCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAg                                                         >  6:364065/1‑134 (MQ=255)                                                                                                        gggCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGc                                          >  8:152908/1‑149 (MQ=255)                                                                                                        gggCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGc                                          >  2:33625/1‑149 (MQ=255)                                                                                                        gggCCGCCAGGGCTCGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAg                                                         <  5:364065/134‑1 (MQ=255)                                                                                                           ccgccAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGc                                          >  4:367321/1‑146 (MQ=255)                                                                                                             gccAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGCCAGaa                                     <  2:248211/149‑1 (MQ=255)                                                                                                                  ggCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGCCAGAAGGt                                  >  1:260696/1‑147 (MQ=255)                                                                                                                         gggTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAgctggtgcgaacgccaacccgcaagccctggcggcacatgagcggctgtgcctgcatgcctcgatgctgagctttacccacccggtgt                         <  2:251898‑M2/149‑89 (MQ=255)                                                                                                                           gTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCGTGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGCCAGAAGGTCAGGGCGTGCt                       <  8:192456/149‑1 (MQ=255)                                                                                                                                 gTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCgg                                                                                        <  4:196169/78‑1 (MQ=255)                                                                                                                                 gTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCgg                                                                                        >  3:196169/1‑78 (MQ=255)                                                                                                                                  tACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGCCAGAAGGTCAGGGCGTGCTTGCCCTg                >  5:171586/1‑149 (MQ=255)                                                                                                                                  tACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGCCAGAAGGTCAGGGCGTGCTTGCCCTg                >  8:154097/1‑149 (MQ=255)                                                                                                                                    cAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGCCAGAAGGTCAGGGCGTGCTTGCCCTGc               <  7:307140/148‑1 (MQ=255)                                                                                                                                     aGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGCCAGAAGGTCAGGGCGTGCTTGCCCTGCTc             <  1:307402/149‑1 (MQ=255)                                                                                                                                       gCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGCCAGAAGGTCAGGGCGTGCTTGCCCTGCTCGt           >  2:254701/1‑149 (MQ=255)                                                                                                                                         gATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAgctgggtgatcgcctgtacgccaacccgcaagccctggcggcccatgagcggctgtgcctgcat                                                 <  4:195087‑M2/109‑65 (MQ=255)                                                                                                                                         gATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAgctgggtgatcgcctgtacgccaacccgcaagccctggcggcccatgagcggctgtgcctgcat                                                 >  3:195087‑M2/1‑45 (MQ=255)                                                                                                                                          aTCACCCAGCAGCG‑GGTGCACGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGCCAGAAGGTCAGGGCGTGCTTGCCCTGCTCGTGGt        >  4:302885/1‑149 (MQ=255)                                                                                                                                              cccAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGCCAGAAGGTCAGGGCGTGCTTGCCCTGCTCGTGGTccac    >  8:18979/1‑149 (MQ=255)                                                                                                                                               ccAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAgctgggtgatcgcctgtacgccaacccgcaagccctggcggcccatgagcggctgtgcctgcatgcctcgatgctgagctttacccacccggtgtccgggcagcggttg    <  4:110548‑M2/148‑110 (MQ=255)                                                                                                                                               ccAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGCCAGAAGGTCAGGGCGTGCTTGCCCTGCTCGTGGTccgc    >  1:350176/1‑146 (MQ=255)                                                                                                                                               ccAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGCCAGAAGGTCAGGGCGTGCTTGCCCTGCTCGTGGTccac    >  2:395073/1‑148 (MQ=255)                                                                                                                                                cagcagCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGCCAGAAGGTCAGGGCGTGCTTGCCCTGCTCGTGGTccacca  <  7:18979/149‑1 (MQ=255)                                                                                                                                                cagcagCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGCCAGAAGGTCAGGGCGTGCTTGCCCTGCTCGTGGTccacca  >  5:94089/1‑149 (MQ=255)                                                                                                                                                 aGCtgcgcgtgcacatgctgtcgatcgggcacccgctgctgggtgatcgcctgtacgccaacccgcaagccctggcggcccatgagcggctgtgcctgcatgcctcgatgctgagctttacccacccggtgtccgggcagcg         <  1:72147‑M1/142‑140 (MQ=255)                                                                                                                                                 aGCtgcgcgtgcacatgctgtcgatcgggcacccgctgctgggtgatcgcctgtacgccaacccgcaagccctggcggcccatgagcggctgtgcctgcatgcctcgatgctgagctttacccacccggtgtccgggcagcg         >  2:72147‑M1/1‑3 (MQ=255)                                                                                                                                                   cagcG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGCCAGAAGGTCAGGGCGTGCTTGcac                  <  4:308214/130‑3 (MQ=255)                                                                                                                                                   cagcG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGCCAGAAGGTCAGGGCGTGCTTGcac                  >  3:308214/1‑128 (MQ=255)                                                                                                                                                   |                                                                                                                                                   CCCTGCAAAATCAGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCAT‑CGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCGATCACCCAGCAGCG‑GGTGCCCGATCGACAGCATGTGCACGCGCAGCTGGTGCGAACGCCCGGTAATCGGCGTCAGCTCCACCCGACAGTGATCGCCGCAGCGTTCCACGATACGCCAGAAGGTCAGGGCGTGCTTGCCCTGCTCGTGGTCCACCA  >  NC_002947/1931888‑1932178

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.