New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1975504	50 (0.770)	3 (0.050)	3/250	NT	6.0%	coding (436/1104 nt)	pheA	bifunctional chorismate mutase/prephenate dehydratase
	?	NC_002947	= 1975538	46 (0.750)					coding (470/1104 nt)	pheA	bifunctional chorismate mutase/prephenate dehydratase

AAAATCGCCTACCTCGGCCCTGAAGGTACCTTCACCCAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTATCCACCACCACCTGCTGGTGGGCGAGAACACCAAGACCGACAGCATCACCC  >  NC_002947/1975360‑1975651                                                                                                                                                  |                                                                                                                                                    aaaaTCGCGTACCTCCGCCCTGAAGGTACCTTCACCCAGGCGGCGGCGATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTTGCGGCCG‑GTGCCGTCAACTTCTGTGTGGTGc                                                                                                                                                  <  6:204500/148‑1 (MQ=255)  aaaTCGCCTACCTCGGCCCTGAAGGTACCTTCACCCAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCg                                                                                                                                                >  3:338544/1‑149 (MQ=255)   aaTCGCCTACCTCGGCCCTGAAGGTACCTTCACCCAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCgg                                                                                                                                               <  1:79050/149‑1 (MQ=255)     tCGCCTACCTCGGCCCTGAAGGTACCTTCACCCAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTg                                                                                                                                             >  5:185604/1‑149 (MQ=255)           aCCTCGGCCCTGAAGGTACCTTCACCCAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAAc                                                                                                                                       >  8:27291/1‑149 (MQ=255)                ggCCCTGAAGGTACCTTCACCCAGGCGGCGGCCATGAAGCACTTCGGCCACGCTGTCATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCa                                                                                                                                   <  1:175021/148‑1 (MQ=255)                ggCCCTGAAGGTACCTTCACCCAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCa                                                                                                                                   <  7:27291/148‑1 (MQ=255)                   ccTGAAGGTACCTTCACCCAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTg                                                                                                                                >  8:113615/1‑148 (MQ=255)                     tGAAGGTACCTTCACCCAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAg                                                                                                                             >  7:359104/1‑149 (MQ=255)                      gAAGGTACCTTCACCCAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCg                                                                                                                                                <  3:273011/129‑1 (MQ=255)                      gAAGGTACCTTCACCCAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCg                                                                                                                                                >  4:273011/1‑129 (MQ=255)                             ccTTCACCCAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGt                                                                                                                      <  6:37776/148‑1 (MQ=255)                              cTTCACCCAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGctgaccgcaccttcagtggagttttccaccgg                                                                                                                     >  7:78111‑M1/1‑116 (MQ=255)                               ttCACCCAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAg                                                                                                                   >  3:201537/1‑149 (MQ=255)                               ttCACCCAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAg                                                                                                                   >  3:324556/1‑149 (MQ=255)                                 cACCCAGGCGGCGGCCATGAAGCACTTCGGCCATGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGc                                                                                                                  >  2:395501‑M2/1‑147 (MQ=255)                                   cccAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGcca                                                                                                                <  4:108615‑M2/148‑4 (MQ=255)                                    ccAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCa                                                                                                                                   >  7:2076/1‑128 (MQ=255)                                    ccAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCa                                                                                                                                   <  8:2076/128‑1 (MQ=255)                                     cAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGccacac                                                                                                             <  6:12012‑M2/149‑7 (MQ=255)                                      aGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGccacacc                                                                                                            <  8:143970‑M2/149‑8 (MQ=255)                                       ggcggcggcCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGctgaccgcaccttcagtggagttttccaccggcaccacaccg                                                                                                           <  3:293529‑M1/149‑43 (MQ=255)                                         cggcggcCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGctgaccgcaccttcagtggagttttccaccggcaccacaccgaa                                                                                                         <  8:78111‑M1/149‑45 (MQ=255)                                                    aaGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTcc                                                                                               <  6:185604/148‑1 (MQ=255)                                                        aCTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTACCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAg                                                                                          <  8:142497/149‑1 (MQ=255)                                                            cGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGt                                                                                                                      <  1:219303/117‑1 (MQ=255)                                                            cGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGt                                                                                                                      >  2:219303/1‑117 (MQ=255)                                                              gCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTgtggt                                                                                                                                                    >  6:317011/1‑85 (MQ=255)                                                              gCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTgtggt                                                                                                                                                    <  5:317011/85‑1 (MQ=255)                                                                         aTCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCGTGTACCGTCAATATGGGTGAGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGAttt                                                                          <  1:130346/149‑1 (MQ=255)                                                                            aGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCgg                                                                      >  5:124801/1‑149 (MQ=255)                                                                            aGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCg                                                                       <  1:402468/148‑1 (MQ=255)                                                                                ggCCGATGGCGGCCATCGACGTAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAg                                                                  <  3:287312/149‑1 (MQ=255)                                                                                ggCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAg                                                                  >  5:137756/1‑149 (MQ=255)                                                                                  ccGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGt                                                                >  3:150163/1‑149 (MQ=255)                                                                                   cGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTc                                                               <  8:214313/149‑1 (MQ=255)                                                                                     aTGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGa                                                             <  4:201537/149‑1 (MQ=255)                                                                                        gcggcCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCt                                                          <  5:12012/149‑1 (MQ=255)                                                                                          ggcCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGc                                                        <  6:124801/149‑1 (MQ=255)                                                                                          ggcCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGc                                                        <  7:143970/149‑1 (MQ=255)                                                                                              aTCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTAt                                                    >  8:290009/1‑149 (MQ=255)                                                                                               tCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTATc                                                   <  7:113615/149‑1 (MQ=255)                                                                                                  acgaAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTATccac                                                <  6:291772/149‑1 (MQ=255)                                                                                                  acgaAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTATccac                                                >  4:371684/1‑149 (MQ=255)                                                                                                    gaAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAg                                                                  >  5:6470/1‑129 (MQ=255)                                                                                                    gaAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAg                                                                  <  6:6470/129‑1 (MQ=255)                                                                                                     aaGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTATccaccac                                             <  3:108615/149‑1 (MQ=255)                                                                                                      aGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTATccaccacc                                            <  3:371684/149‑1 (MQ=255)                                                                                                          ttCCGTGAAGTGGCGGCCG‑GTGCCGTGAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTg                                                                         >  1:218227/1‑116 (MQ=255)                                                                                                          ttCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTg                                                                         <  2:218227/116‑1 (MQ=255)                                                                                                                 aaGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTATCCACCACCACCTGCtggt                                  <  4:150163/148‑1 (MQ=255)                                                                                                                 aaGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTATCCACCACCACCTGCtggt                                  <  4:338544/148‑1 (MQ=255)                                                                                                                     ggcggcCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTATCCACCACCAGCAGGtggtggtgg                             <  6:137756/149‑4 (MQ=255)                                                                                                                      gcggcCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTATCCACCACCACCTGCTGGTGGGCga                            <  5:171046/149‑1 (MQ=255)                                                                                                                                   gTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTATCCACCACCACCTGCTGGTGGGCGAGAACACCAAGAc                >  6:348049/1‑149 (MQ=255)                                                                                                                                   gTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTATCCACCACCACCTGCTGGTGGGCGAGAACACCAAGAc                >  2:64172/1‑149 (MQ=255)                                                                                                                                    tCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTc                                                               <  7:12890/101‑1 (MQ=255)                                                                                                                                    tCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTc                                                               >  8:12890/1‑101 (MQ=255)                                                                                                                                    tCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTATCCACCACCACCTGCTGGTGGGCGAGAACACCAAGAcc               >  8:105414/1‑149 (MQ=255)                                                                                                                                     cAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTATCCACCACCACCTGCTGGTGGGCGAGAACACCAAGAcc               >  2:314849/1‑148 (MQ=255)                                                                                                                                        cTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTATCCACCACCACCTGCTGGTGGGCGAGAACACCAAGACCGACa           <  7:290009/149‑1 (MQ=255)                                                                                                                                         ttCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGccacaccgaagttgacggcaccggccgccacttcacggaacacttcgtcgatggccgccatcggccgactgatcaccgcgtggccgaagtgcttcatggccgccg          <  8:78111‑M2/149‑106 (MQ=255)                                                                                                                                         ttCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTATCCACCACCACCTGCTGGTGGGCGAGAACACCAAGACCGACAg          >  7:205344/1‑149 (MQ=255)                                                                                                                                           cGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGccacaccgaagttgacggcaccggccgccacttcacggaacacttcgtcgatggccgccatcggccgactgatcaccgcgtggccgaagtgcttcatggccgccgcc        <  3:293529‑M2/149‑108 (MQ=255)                                                                                                                                            ggTGTGGctgaccgcaccttcagtggagttttccaccggcaccacaccgaagttgacggcaccggccgccacttcacggaacacttcgtcgatggccgccatcggccgactgatcaccgcgtggccgaagtgcttcatggccgccgcct       <  8:143970‑M1/149‑143 (MQ=255)                                                                                                                                             gtgtGGctgaccgcaccttcagtggagttttccaccggcaccacaccgaagttgacggcaccggccgccacttcacggaacacttcgtcgatggccgccatcggccgactgatcaccgcgtggccgaagtgcttcatggccgccgcctg      <  6:12012‑M1/149‑144 (MQ=255)                                                                                                                                             gtgtGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTATCCACCACCACCTGCTGGTGGGCGAGAACACCAAGACCGACAGCATc      >  3:270663/1‑149 (MQ=255)                                                                                                                                                tgGctgaccgcaccttcagtggagttttccaccggcaccacaccgaagttgacggcaccggccgccacttcacggaacacttcgtcgatggccgccatcggccgactgatcaccgcgtggccgaagtgcttcatggccgccgcctggg    <  4:108615‑M1/148‑146 (MQ=255)                                                                                                                                                  gctgaccgcaccttcagtggagttttccaccggcaccacaccgaagttgacggcaccggccgccacttcacggaacacttcgtcgatggccgccatcggccgactgatcaccgcatggccgaagtgcttcatggccgccgcctgggtg  >  2:395501‑M1/1‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                    AAAATCGCCTACCTCGGCCCTGAAGGTACCTTCACCCAGGCGGCGGCCATGAAGCACTTCGGCCACGCGGTGATCAGTCGGCCGATGGCGGCCATCGACGAAGTGTTCCGTGAAGTGGCGGCCG‑GTGCCGTCAACTTCGGTGTGGTGCCGGTGGAAAACTCCACTGAAGGTGCGGTCAGCCACACCCTGGACAGCTTCCTCGAGCATGACATGGTGATTTGCGGTGAGGTCGAGCTGCGTATCCACCACCACCTGCTGGTGGGCGAGAACACCAAGACCGACAGCATCACCC  >  NC_002947/1975360‑1975651

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.