New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2084301	53 (0.810)	3 (0.050)	3/250	NT	5.8%	coding (676/852 nt)	PP_1863	LysR family transcriptional regulator
	?	NC_002947	= 2084335	47 (0.760)					coding (642/852 nt)	PP_1863	LysR family transcriptional regulator

GTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGACAGAAGCAGTCGG‑TGTTGAACAACGCCACCGGCATCGGCCGCTGT  >  NC_002947/2084161‑2084446                                                                                                                                              |                                                                                                                                                     gTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGa                                                                                                                                              <  1:408459/149‑1 (MQ=255) gTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGa                                                                                                                                              >  6:105191/1‑149 (MQ=255)    ggTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCcggc                                                                                                                                                   <  5:372799/141‑1 (MQ=255)    ggTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCcggc                                                                                                                                                   >  6:372799/1‑141 (MQ=255)     gTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGAt                                                                                                                                          <  7:230333/149‑1 (MQ=255)              gAGGGGGGCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGAt                                                                                                                                 <  8:151890/149‑1 (MQ=255)                    gTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATcgccgc                                                                                                                           >  2:360140/1‑149 (MQ=255)                    gTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATcgccgc                                                                                                                           >  5:405598/1‑149 (MQ=255)                    gTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATcgccgc                                                                                                                           <  7:84994/149‑1 (MQ=255)                            aCTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTACCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTg                                                                                                                  <  7:176437‑M2/149‑2 (MQ=255)                             cTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGTAGCTGC‑GCGGTCACTGCCAGCCCaagcctggcggcgatctttgccatcgtcaccgccgg                                                                                                                  <  3:220972‑M1/149‑37 (MQ=255)                              tGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTggg                                                                                                                <  2:304915‑M2/149‑4 (MQ=255)                                   aCCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGgt                                                                                                           <  5:20099/149‑1 (MQ=255)                                   aCCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGgt                                                                                                           <  2:409126/149‑1 (MQ=255)                                       gCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAg                                                                                                       >  5:23866/1‑149 (MQ=255)                                         aTTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGc                                                                                                     <  6:405598/149‑1 (MQ=255)                                            aCATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCaa                                                                                                   <  5:138768/148‑1 (MQ=255)                                             cATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGAt                                                                                                                                 <  7:271579/118‑1 (MQ=255)                                             cATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGAt                                                                                                                                 >  8:271579/1‑118 (MQ=255)                                              aTTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCaagcctggcggcgatctttgccatcgtcaccgccgggctggca                                                                                                           <  8:150006‑M1/139‑44 (MQ=255)                                              aTTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCaagcctggcggcgatctttgccatcgtcaccgccgggctggca                                                                                                           >  7:150006‑M1/1‑96 (MQ=255)                                              aTTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATAc                                                                                                >  2:383325/1‑149 (MQ=255)                                                    cATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑t                                                                                         >  2:217732/1‑149 (MQ=255)                                                         gCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATg                                                                                    <  4:170278/149‑1 (MQ=255)                                                                 ggCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGc                                                                            <  5:105191/149‑1 (MQ=255)                                                                  gCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGcc                                                                           >  8:25458/1‑149 (MQ=255)                                                                        cTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAgg                                                                                                      <  8:228353/117‑1 (MQ=255)                                                                        cTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAgg                                                                                                      >  7:228353/1‑117 (MQ=255)                                                                         ttCGCTCTCACCCAGAATGCGGATATTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAgcg                                                                    >  2:31202/1‑149 (MQ=255)                                                                            gCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTACCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCAt                                                                 <  8:176437/149‑1 (MQ=255)                                                                              tctcACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGCAGCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCAtt                                                                >  1:293096/1‑149 (MQ=255)                                                                              tctcACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTg                                                               >  4:159573/1‑149 (MQ=255)                                                                                  aCCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCTGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGGTGCCCTGTGCCTCCAGCGCATTGCAg                                                            <  1:217807/148‑1 (MQ=255)                                                                                  aCCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAgg                                                           >  2:371573/1‑149 (MQ=255)                                                                                    ccAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGATCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTc                                                         >  1:289002/1‑149 (MQ=255)                                                                                       gAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAg                                                      <  6:23866/149‑1 (MQ=255)                                                                                            cGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGgcgc                                                  <  1:360140/148‑1 (MQ=255)                                                                                            cGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGgcgc                                                  <  3:159573/148‑1 (MQ=255)                                                                                             ggATGTTGCCCCCGATCAGGCTCTGCAGCTGCGGCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAgg                                                           >  1:48701/1‑139 (MQ=255)                                                                                             ggATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAgg                                                           <  2:48701/138‑1 (MQ=255)                                                                                              gATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGa                                                >  5:272538/1‑148 (MQ=255)                                                                                              gATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGAc                                               <  1:383325/149‑1 (MQ=255)                                                                                                  ttGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGACAGaa                                           <  2:289002/149‑1 (MQ=255)                                                                                                   tGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGACAGaa                                           <  7:25458/148‑1 (MQ=255)                                                                                                      ccccGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGACAGAAGCAg                                       >  7:129914/1‑149 (MQ=255)                                                                                                      ccccGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGACCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGTCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGACAGAAGCAg                                       >  5:282460/1‑149 (MQ=255)                                                                                                       cccGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGACGGAAGCAGt                                      >  5:359347/1‑149 (MQ=255)                                                                                                        ccGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAACTCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGACAGAAGCAGt                                      <  1:304915/149‑1 (MQ=255)                                                                                                        ccGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGgc                                                    <  6:22615/134‑1 (MQ=255)                                                                                                        ccGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGgc                                                    >  5:22615/1‑134 (MQ=255)                                                                                                                       aGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGACAGAAGCAGTCGG‑TGTTGAACAACGc                     <  2:293096/149‑1 (MQ=255)                                                                                                                              gcgGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGACAGAAGCAGTCGg‑t                                 >  8:256806/1‑131 (MQ=255)                                                                                                                              atcgTCACCGCCGGGCTGGCAGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGACAGAAGCAGTCGG‑TGTTGaacaac                       <  1:52476/138‑1 (MQ=255)                                                                                                                              atcgTCACCGCCGGGCTGGCAGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGACAGAAGCAGTCGG‑TGTTGaacaac                       >  2:52476/4‑141 (MQ=255)                                                                                                                               cgGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGACAGAAGCAGTCGG‑TGTTGAACAACGCCACCgg               >  1:134395/1‑148 (MQ=255)                                                                                                                                      tGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTgggctggcagtgaccgcgcagctgcagagcctgatcgggggcaacatccgcattctgggtgagagcgaagggctgccgcagttgcccatggccaat                   <  8:150006‑M2/139‑97 (MQ=255)                                                                                                                                      tGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTgggctggcagtgaccgcgcagctgcagagcctgatcgggggcaacatccgcattctgggtgagagcgaagggctgccgcagttgcccatggccaat                   >  7:150006‑M2/1‑43 (MQ=255)                                                                                                                                       gCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGCACAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGACAGAAGCAGTCGG‑TGTTGAACAACGCCACCGGCATCGGcc       >  1:266625/1‑149 (MQ=255)                                                                                                                                        ccAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGACAGAAGCAGTCGG‑TGTTGAACAACGCCACCGGCATCGGcc       <  1:217732/147‑1 (MQ=255)                                                                                                                                        ccAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGACAGAAGCAGTCGG‑TGTTGAACAACGCCACCGGCATCGGCCGc     <  6:272538/149‑1 (MQ=255)                                                                                                                                         cAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGACGGAAGCAGTCGG‑TGTTGAACAACGCCACCGGCATCGGCCGCt    <  6:359347/149‑1 (MQ=255)                                                                                                                                         cAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGACAGAAGCAGTCGGCTGTTGAACAACGCCACCGGCATCGGCCGc     <  1:31202/149‑1 (MQ=255)                                                                                                                                            cccaagcctggcggcgatctttgccatcgtcaccgccgggctggcagtgaccgcgcagctgcagagcctgatcgggggcaacatccgcattctgggtgagagcgaagggctgccgcagttgcccatggccaatgtaatgctggtgcgca    <  2:304915‑M1/149‑147 (MQ=255)                                                                                                                                             ccGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTgggctggcagtgaccgcgcagctacagagcctgatcgggggcaacatccgcattctgggtgagagcgaagggctgccgcagttgcccatggccaatgtaatgctggtgcgcag  <  3:220972‑M2/149‑114 (MQ=255)                                                                                                                                              caagcctggcggcgatctttgccatcgtcaccgccgggctggtagtgaccgcgcagctgcagagcctgatcgggggcaacatccgcattctgggtgagagcgaagggctgccgcagttgcccatggccaatgtaatgctggtgcgcagt  <  7:176437‑M1/149‑149 (MQ=255)                                                                                                                                              |                                                                                                                                                     GTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATGTTGCCCCCGATCAGGCTCTGCAGCTGC‑GCGGTCACTGCCAGCCCGGCGGTGACGATGGCAAAGATCGCCGC‑CAGGCTTGGGCTGGTGTAGGCAATACGGTAA‑TCGATGCCCTGTGCCTCCAGCGCATTGCAGGTCCAGGCGCGACAGAAGCAGTCGG‑TGTTGAACAACGCCACCGGCATCGGCCGCTGT  >  NC_002947/2084161‑2084446

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.