New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 241207047 (0.720)4 (0.070) 3/246 NT 7.3% coding (399/1065 nt) rlmM 23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM
?NC_002947 = 2412116 58 (0.960)coding (445/1065 nt) rlmM 23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM

GTACTGCTGGCGCAGTTGGCTGACTTCCCGGTGTTCGGTAGCCTTTGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTT  >  NC_002947/2411927‑2412218
                                                                                                                                                 |                                                                                                                                                    
gTACTGCTGGCGCAGTTGGCTGACTTCCCGGTGTTCGGTAGCCTTTGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGt                                                                                                                                                 <  6:189774/149‑1 (MQ=255)
 tACTGCTGGCGCAGTTGGCTGACTTCCCGGTGTTCGGTATCCTTTGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACGTTCTGCCT‑‑AAAGTTCGATGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGTCCGCCTGGTc                                                                                                                                                <  5:151369/149‑1 (MQ=255)
           gcAGTTGGCTGACTTCCCGGTGTTCGGTAGCCTTTGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCg                                                                                                                                      <  2:46769/149‑1 (MQ=255)
            cAGTTGGCTGACTTCCCGGTGTTCGGTAGCCTTTGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCgg                                                                                                                                     <  3:286141/149‑1 (MQ=255)
              gTTGGCTGACTTCCCGGTGTTCGGTAGCCTTTGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTc                                                                                                                                   <  3:331366/149‑1 (MQ=255)
               ttGGCTGACTTCCCGGTGTTCGGTAGCCTTTGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTACACCTTATGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTAGACGACCCCGGTCg                                                                                                                                  >  1:110317/1‑149 (MQ=255)
                     gACTTCCCGGTGTTCGGTAGCCTTTGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCGCTCTAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCa                                                                                                                              <  1:125439/149‑1 (MQ=255)
                      aCTTCCCGGTGTTCGGTAGCCTTTGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGc                                                                                                                           >  1:96077/1‑149 (MQ=255)
                       cTTCCCGGTGTTCGGTAGCCTTTGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCt                                                                                                                          >  5:277968/1‑149 (MQ=255)
                        ttCCCGGTGTTCGGTAGCCTTTGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCtt                                                                                                                         >  6:258920/1‑149 (MQ=255)
                          cccGGTGTTCGGTAGCCTTTGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTtg                                                                                                                        <  6:197986/148‑1 (MQ=255)
                               tgtTCGGTAGCCTTTGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGctgctg                                                                                                                  <  6:277968/149‑1 (MQ=255)
                                    ggTAGCCTTTGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCt                                                                                                              >  8:192338/1‑148 (MQ=255)
                                          cTTTGGCTGGAGGTGCTGGACAGCAACGGAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCtgatgaaggtcagcagcaagcgtgggcgaccggggtcgtcgaccagg                                                                                                       >  1:230070‑M1/1‑102 (MQ=255)
                                           tttGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAgc                                                                                                      <  3:274793‑M2/149‑3 (MQ=255)
                                                cTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCtgatgaaggtcagcagcaagcgtgggcgaccggggtcgtcgaccaggcggccg                                                                                                 <  2:230070‑M1/149‑54 (MQ=255)
                                                 tGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAgcggc                                                                                                   <  1:254587‑M2/146‑6 (MQ=255)
                                                 tGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAgcggc                                                                                                   >  2:254587‑M2/1‑141 (MQ=255)
                                                        gCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGAccc                                                                                                                                        >  3:188359/1‑102 (MQ=255)
                                                        gCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGAccc                                                                                                                                        <  4:188359/102‑1 (MQ=255)
                                                        gCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAgc                                                                                                      <  2:45072‑M2/136‑3 (MQ=255)
                                                        gCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAgc                                                                                                      >  1:45072‑M2/1‑134 (MQ=255)
                                                          tGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCtgatgaaggtcagcagcaagcgtgggcgaccggggtcgtcgaccaggcggccg                                                                                                 <  5:249179‑M1/139‑54 (MQ=255)
                                                          tGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCtgatgaaggtcagcagcaagcgtgggcgaccggggtcgtcgaccaggcggccg                                                                                                 >  6:249179‑M1/1‑86 (MQ=255)
                                                          tGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTAttt                                                                                       >  8:303730/1‑149 (MQ=255)
                                                             aCAGCAACGAAGGCAAGGAATTCTCCACCTTCTGCAG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGCTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTc                                                                                    >  4:117996/1‑149 (MQ=255)
                                                              cAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCg                                                                                   <  4:274793/149‑1 (MQ=255)
                                                               aGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCgg                                                                                  <  2:340795/149‑1 (MQ=255)
                                                                gCAACGCAGGCAAGGATTTGGCACCCTTCTGCCT‑‑CAAGTTCGAAGTGCCGGTGTGAAAGGCCCTGGCGAAGTCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCTGCCGGCGGGTATTTGTCGGc                                                                                 <  5:414390/149‑1 (MQ=255)
                                                                    cGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTg                                                                             >  3:146553/1‑149 (MQ=255)
                                                                     gAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTg                                                                             >  1:237/1‑148 (MQ=255)
                                                                         gCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATc                                                                         >  3:301003/1‑148 (MQ=255)
                                                                         gCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATc                                                                         <  4:301003/148‑1 (MQ=255)
                                                                           aaGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGt                                                                                                                                                 >  8:130917/1‑74 (MQ=255)
                                                                           aaGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGt                                                                                                                                                 <  7:130917/74‑1 (MQ=255)
                                                                            aGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGc                                                                                 >  5:101899/1‑137 (MQ=255)
                                                                            aGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGc                                                                                 <  6:101899/137‑1 (MQ=255)
                                                                               aaTTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGc                                                                  <  7:192338/149‑1 (MQ=255)
                                                                                          ttCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCtt                                                       >  5:7572/1‑149 (MQ=255)
                                                                                               ccG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTgg                                                   <  5:258920/148‑1 (MQ=255)
                                                                                                 g‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGcc                                                 >  7:140700/1‑148 (MQ=255)
                                                                                                    aaaGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGcc                                                         >  3:349100/1‑139 (MQ=255)
                                                                                                    aaaGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGcc                                                         <  4:349100/139‑1 (MQ=255)
                                                                                                      aGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCTTCGGCCAGCAACAGCGCCTTGTGGCCCATg                                             <  1:33885/149‑1 (MQ=255)
                                                                                                       gTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATgg                                            <  3:279804/149‑1 (MQ=255)
                                                                                                       gTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATgg                                            <  2:237/149‑1 (MQ=255)
                                                                                                           gAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCAt                                        >  5:413545/1‑149 (MQ=255)
                                                                                                            aaGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATc                                       >  2:186876/1‑149 (MQ=255)
                                                                                                                  cGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGc                                 >  2:38936/1‑149 (MQ=255)
                                                                                                                   gTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTAGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGcc                                <  2:110317/149‑1 (MQ=255)
                                                                                                                        gcAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAg                           >  5:167187/1‑149 (MQ=255)
                                                                                                                        gcAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAg                           >  6:259922/1‑149 (MQ=255)
                                                                                                                            ggCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTcc                       >  6:123808/1‑149 (MQ=255)
                                                                                                                            ggCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTcc                       <  4:146553/149‑1 (MQ=255)
                                                                                                                               ccTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTc                    <  6:413545/149‑1 (MQ=255)
                                                                                                                               ccTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTc                    >  4:171133/1‑149 (MQ=255)
                                                                                                                                 tGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCACCAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTcgc                  >  7:193655/1‑149 (MQ=255)
                                                                                                                                      aaGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGc             <  8:140700/149‑1 (MQ=255)
                                                                                                                                        ggccggccGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCAc           >  3:67937/1‑149 (MQ=255)
                                                                                                                                           cggccgCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAgcggccggccttctccagggccttgcgcaacggcacttcgaactttcggcagaaggtggacaattccttgccttcgttgctgtccagcacctccag        <  2:230070‑M2/149‑97 (MQ=255)
                                                                                                                                           cggccgCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAgcggccggccttctccagggccttgcgcaacggcacttcgaactttcggcagaaggtggacaattccttgccttcgttgctgtcca                  <  5:249179‑M2/139‑87 (MQ=255)
                                                                                                                                           cggccgCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAgcggccggccttctccagggccttgcgcaacggcacttcgaactttcggcagaaggtggacaattccttgccttcgttgctgtcca                  >  6:249179‑M2/1‑53 (MQ=255)
                                                                                                                                             gccgCtgatgaaggtcagcagcaagcgtgggcgaccggggtcgtcgaccaggcggccggccttctccagggccttgcgcaacggcacttcgaactttcggcagaaggtggacaattccttgccttcgttgctgtccagcacctcca         <  1:254587‑M1/146‑142 (MQ=255)
                                                                                                                                             gccgCtgatgaaggtcagcagcaagcgtgggcgaccggggtcgtcgaccaggcggccggccttctccagggccttgcgcaacggcacttcgaactttcggcagaaggtggacaattccttgccttcgttgctgtccagcacctcca         >  2:254587‑M1/1‑5 (MQ=255)
                                                                                                                                                gCtgatgaaggtcagcagcaagcgtgggcgaccggggtcgtcgaccaggcggccggccttctccagggccttgcgcaacggcacttcgaactttcggcagaaggtggacaattccttgccttcgttgctgtccagcacctccagccaaa   <  3:274793‑M1/149‑148 (MQ=255)
                                                                                                                                                gCtgatgaaggtcagcagcaagcgtgggcgaccggggtcgtcgaccaggcggccggccttctccagggccttgcgcaacggcacttcgaactttcggcagaaggtggacaattccttgccttcgttgctgtccagc                >  1:45072‑M1/1‑2 (MQ=255)
                                                                                                                                                gCtgatgaaggtcagcagcaagcgtgggcgaccggggtcgtcgaccaggcggccggccttctccagggccttgcgcaacggcacttcgaactttcggcagaaggtggacaattccttgccttcgttgctgtccagc                <  2:45072‑M1/136‑135 (MQ=255)
                                                                                                                                                 ccTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAgcggccggccttctccagggccttgcgcaacggcacttcgaactttcggcagaaggtggacaattccttgcctccgttgctgtccagcacctccagccaaag  >  1:230070‑M2/1‑47 (MQ=255)
                                                                                                                                                 ccTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATc                                       <  8:227424/112‑1 (MQ=255)
                                                                                                                                                 ccTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTCTGGCCCATGGGCATc                                       >  7:227424/1‑112 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
GTACTGCTGGCGCAGTTGGCTGACTTCCCGGTGTTCGGTAGCCTTTGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCG‑‑AAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTT  >  NC_002947/2411927‑2412218

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.