New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2412070	47 (0.720)	4 (0.070)	3/246	NT	7.3%	coding (399/1065 nt)	rlmM	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM
	?	NC_002947	= 2412116	58 (0.960)					coding (445/1065 nt)	rlmM	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM

TTTGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAACTGGAAGAAGCCTGGCACCAGTTCATCCCGCGT  >  NC_002947/2411970‑2412262                                                                                                                                                   |                                                                                                                                                   tttGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAgc                                                                                                                                                  <  3:274793‑M2/149‑3 (MQ=255)       tGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAgcggc                                                                                                                                               <  1:254587‑M2/146‑6 (MQ=255)       tGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAgcggc                                                                                                                                               >  2:254587‑M2/1‑141 (MQ=255)              gCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAgc                                                                                                                                                  >  1:45072‑M2/1‑134 (MQ=255)              gCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAgc                                                                                                                                                  <  2:45072‑M2/136‑3 (MQ=255)                tGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTAttt                                                                                                                                   >  8:303730/1‑149 (MQ=255)                   aCAGCAACGAAGGCAAGGAATTCTCCACCTTCTGCAGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGCTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTc                                                                                                                                >  4:117996/1‑149 (MQ=255)                    cAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCg                                                                                                                               <  4:274793/149‑1 (MQ=255)                     aGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCgg                                                                                                                              <  2:340795/149‑1 (MQ=255)                      gCAACGCAGGCAAGGATTTGGCACCCTTCTGCCTCAAGTTCGAAGTGCCGGTGTGAAAGGCCCTGGCGAAGTCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCTGCCGGCGGGTATTTGTCGGc                                                                                                                             <  5:414390/149‑1 (MQ=255)                          cGAAGGCAAGGAATTGTCCACCTTCTGCCGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTg                                                                                                                         >  3:146553/1‑149 (MQ=255)                           gAAGGCAAGGAATTGTCCACCTTCTGCCGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTg                                                                                                                         >  1:237/1‑148 (MQ=255)                               gCAAGGAATTGTCCACCTTCTGCCGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATc                                                                                                                     <  4:301003/148‑1 (MQ=255)                               gCAAGGAATTGTCCACCTTCTGCCGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATc                                                                                                                     >  3:301003/1‑148 (MQ=255)                                  aGGAATTGTCCACCTTCTGCCGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGc                                                                                                                             >  5:101899/1‑137 (MQ=255)                                  aGGAATTGTCCACCTTCTGCCGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGc                                                                                                                             <  6:101899/137‑1 (MQ=255)                                     aaTTGTCCACCTTCTGCCGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGc                                                                                                              <  7:192338/149‑1 (MQ=255)                                                ttCTGCCGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCtt                                                                                                   >  5:7572/1‑149 (MQ=255)                                                     ccGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTgg                                                                                               <  5:258920/148‑1 (MQ=255)                                                       gAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGcc                                                                                             >  7:140700/1‑148 (MQ=255)                                                        aaaGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGcc                                                                                                     >  3:349100/1‑139 (MQ=255)                                                        aaaGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGcc                                                                                                     <  4:349100/139‑1 (MQ=255)                                                          aGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCTTCGGCCAGCAACAGCGCCTTGTGGCCCATg                                                                                         <  1:33885/149‑1 (MQ=255)                                                           gTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATgg                                                                                        <  3:279804/149‑1 (MQ=255)                                                           gTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATgg                                                                                        <  2:237/149‑1 (MQ=255)                                                               gAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCAt                                                                                    >  5:413545/1‑149 (MQ=255)                                                                aaGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATc                                                                                   >  2:186876/1‑149 (MQ=255)                                                                      cGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGc                                                                             >  2:38936/1‑149 (MQ=255)                                                                       gTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTAGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGcc                                                                            <  2:110317/149‑1 (MQ=255)                                                                            gcAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAg                                                                       >  5:167187/1‑149 (MQ=255)                                                                            gcAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAg                                                                       >  6:259922/1‑149 (MQ=255)                                                                                ggCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTcc                                                                   >  6:123808/1‑149 (MQ=255)                                                                                ggCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTcc                                                                   <  4:146553/149‑1 (MQ=255)                                                                                   ccTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTc                                                                >  4:171133/1‑149 (MQ=255)                                                                                   ccTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTc                                                                <  6:413545/149‑1 (MQ=255)                                                                                     tGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCACCAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTcgc                                                              >  7:193655/1‑149 (MQ=255)                                                                                          aaGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGc                                                         <  8:140700/149‑1 (MQ=255)                                                                                            ggccggccGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCAc                                                       >  3:67937/1‑149 (MQ=255)                                                                                               cggccgCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAgcggccggccttctccagggccttgcgcaacggcacttcgaactttcggcagaaggtggacaattccttgccttcgttgctgtccagcacctccag                                                    <  2:230070‑M2/149‑97 (MQ=255)                                                                                               cggccgCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAgcggccggccttctccagggccttgcgcaacggcacttcgaactttcggcagaaggtggacaattccttgccttcgttgctgtcca                                                              <  5:249179‑M2/139‑87 (MQ=255)                                                                                               cggccgCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAgcggccggccttctccagggccttgcgcaacggcacttcgaactttcggcagaaggtggacaattccttgccttcgttgctgtcca                                                              >  6:249179‑M2/1‑53 (MQ=255)                                                                                                     ccTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAgcggccggccttctccagggccttgcgcaacggcacttcgaactttcggcagaaggtggacaattccttgcctccgttgctgtccagcacctccagccaaag                                              >  1:230070‑M2/1‑47 (MQ=255)                                                                                                     ccTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATc                                                                                   <  8:227424/112‑1 (MQ=255)                                                                                                     ccTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTCTGGCCCATGGGCATc                                                                                   >  7:227424/1‑112 (MQ=255)                                                                                                      cTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTTTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGtt                                              >  8:322494/1‑148 (MQ=255)                                                                                                       tGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGa                                                                         <  2:62933/120‑1 (MQ=255)                                                                                                       tGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGa                                                                         >  1:62933/1‑120 (MQ=255)                                                                                                          tCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACg                                         <  6:167187/149‑1 (MQ=255)                                                                                                            gacgacCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCt                                       >  6:170221/1‑149 (MQ=255)                                                                                                                 ccccGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAAc                                  >  3:306203/1‑149 (MQ=255)                                                                                                                  cccGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAACt                                 >  7:77914/1‑149 (MQ=255)                                                                                                                   ccGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAACTg                                >  8:385785/1‑149 (MQ=255)                                                                                                                   ccGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAACTg                                <  5:259922/149‑1 (MQ=255)                                                                                                                    cGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAACTgg                               <  6:7572/149‑1 (MQ=255)                                                                                                                    cGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAACTgg                               <  4:306203/149‑1 (MQ=255)                                                                                                                         gCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCTAACTGgaagaa                          <  3:117996/149‑1 (MQ=255)                                                                                                                         gCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAACTGgaag                            >  8:325533/1‑147 (MQ=255)                                                                                                                          cccACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCGTCGCGAGGCACCTAGCCGTTc                                             >  5:351918/1‑129 (MQ=255)                                                                                                                          cccACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTc                                             <  6:351918/129‑1 (MQ=255)                                                                                                                           ccACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAACTGGAAGAAGc                        >  3:375214/1‑149 (MQ=255)                                                                                                                             aCGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAACTGGAAGAAGCCt                      <  3:171133/149‑1 (MQ=255)                                                                                                                              cGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAACTGGAAGAAGCCTg                     <  7:322494/149‑1 (MQ=255)                                                                                                                                       ctgACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAACTGGAAGAAGCCTGGCACCAGtt            <  4:375214/149‑1 (MQ=255)                                                                                                                                        tgACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAACTGGAAGAAGCCTGGCACCAGtt            >  6:412307/1‑148 (MQ=255)                                                                                                                                          aCCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAACTGGAAGAAGCCTGGCACCAGTTCAt         <  5:123808/149‑1 (MQ=255)                                                                                                                                            cTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAACTGGAAGAAGTCTGGCAc                 <  4:150953/139‑1 (MQ=255)                                                                                                                                            cTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAACTGGAAGAAGTCTGGCAc                 >  3:150953/1‑139 (MQ=255)                                                                                                                                                atcaGCGGCCGGCGGGTATTTGTCGGCGTTGCAGCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAACTGGAAGAAGCCTGGCACCAGTTCATCCcgc    <  2:96077/148‑1 (MQ=255)                                                                                                                                                   aGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAACTGGAAGAAGCCTGGCACCAGTTCATCCCGCGt  >  6:193257/1‑147 (MQ=255)                                                                                                                                                   |                                                                                                                                                   TTTGGCTGGAGGTGCTGGACAGCAACGAAGGCAAGGAATTGTCCACCTTCTGCCGAAAGTTCGAAGTGCCGTTGCGCAAGGCCCTGGAGAAGGCCGGCCGCCTGGTCGACGACCCCGGTCGCCCACGCTTGCTGCTGACCTTCATCAGCGGCCGGCGGGTATTTGTCGGCGTTGCATCGGCCAGCAACAGCGCCTTGTGGCCCATGGGCATCCCACGCCTGAAGTTCCCTCGCGAGGCACCTAGCCGTTCGACGCTCAAACTGGAAGAAGCCTGGCACCAGTTCATCCCGCGT  >  NC_002947/2411970‑2412262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.