New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2852056 =	62 (0.950)	5 (0.080)	4/250	NT	7.5%	coding (486/519 nt)	PP_5531	hypothetical protein
	?	NC_002947	2852100 =	65 (1.060)					intergenic (+11/+194)	PP_5531/PP_2505	hypothetical protein/GAF domain/GGDEF domain‑containing protein

GCAATCGAGCTACCCAATAACATCACGTTCGATATGACTGGCAGTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAA  >  NC_002947/2851910‑2852198                                                                                                                                                     |                                                                                                                                                  tgagttaccaatttgcctgatcagctcgctttcaactgatcgccgccccttattgcaaccaggggcgggaatggcgtccacatcgctggacaaacaaactgcgaccgccccgagtggcgagcgcggcacagttgcttagcgcccacctc                                                                                                                                                   <  1:204841‑M1/1‑1 (MQ=255)   aaTCGAGCTACCCAATAACATCACGTTCGATATGACTGGCAGTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTg                                                                                                                                                >  8:369922/1‑148 (MQ=255)    gttaccaatttgcctgatcagctcgctttcaactgatcgccgccccttattgcaaccaggggcgggaatggcgtccacatcgctggacaaacaaactgcgaccgccccgagtggcgagcgcggcacagttgcttagcgcccacctCGTg                                                                                                                                                >  7:315486‑M1/146‑149 (MQ=255)            aCCCAATAACATCACGTTCGATATGACTGGCAGTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGt                                                                                                                                    >  5:24009/1‑149 (MQ=255)              ccAATAACATCACGTTCGATATGACTGGCAGTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTc                                                                                                                                  <  7:340105/149‑1 (MQ=255)                aaTAACATCACGTTCGATATGACTGGCAGTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGc                                                                                                                                <  7:369922/149‑1 (MQ=255)                aaTAACATCACGTTCGATATGACTGGCAGTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGc                                                                                                                                >  4:11547/1‑149 (MQ=255)                          cGTTCGATATGACTGGCAGTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGa                                                                                                                     <  2:149548/149‑1 (MQ=255)                           gTTCGATATGACTGGCAGTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGa                                                                                                                     >  1:242739/1‑148 (MQ=255)                              tttcaactgatcgccgccccttattgcaaccaggggcgggaatggcgtccacatcgctggacaaacaaactgcgaccgccccgagtggcgagcgcggcacagttgcttagcgcccacctCGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGa                                                                                                                     <  3:263217‑M1/28‑1 (MQ=255)                                   tGACTGGCAGTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAAt                                                                                                             <  6:170598/148‑1 (MQ=255)                                   tGACTGGCAGTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATc                                                                                                            <  7:183631/149‑1 (MQ=255)                                    gACTGGCAGTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATATCATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATcc                                                                                                           >  6:378442/1‑149 (MQ=255)                                          cAGTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTg‑‑cag                                                                                                                                           >  8:56187/1‑112 (MQ=255)                                          cAGTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTg‑‑cag                                                                                                                                           <  7:56187/112‑1 (MQ=255)                                           ccgccccttattgcaaccaggggcgggaatggcgtccacatcgctggacaaacaaactgcgaccgccccgagtggcgagcgcggcacagttgcttagcgcccacctCGTg                                                                                                                                                <  3:53819‑M1/4‑1 (MQ=255)                                           ccgccccttattgcaaccaggggcgggaatggcgtccacatcgctggacaaacaaactgcgaccgccccgagtggcgagcgcggcacagttgcttagcgcccacctCGTg                                                                                                                                                >  4:53819‑M1/107‑110 (MQ=255)                                           aGTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCAc                                                                                                      >  2:329902/1‑147 (MQ=255)                                            gTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAg                                                                                                   <  6:142486/149‑1 (MQ=255)                                              ccccttattgcaaccaggggcgggaatggcgtccacatcgctggacaaacaaactgcgaccgccccgagtggcgagcgcggcacagttgcttagcgcccacctCGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAg                                                                                                   >  4:84250‑M1/104‑149 (MQ=255)                                              ccccttattgcaaccaggggcgggaatggcgtccacatcgctggacaaacaaactgcgaccgccccgagtggcgagcgcggcacagttgcttagcgcccacctCGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAg                                                                                                   >  4:263217‑M1/104‑149 (MQ=255)                                               aGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGt                                                                                                 <  4:399694/148‑1 (MQ=255)                                                      aGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCt                                                                                          >  8:204524/1‑148 (MQ=255)                                                        tCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCATAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAg                                                                                       >  6:129954/1‑149 (MQ=255)                                                         cAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAg                                                                                       <  7:204524/148‑1 (MQ=255)                                                         aaccaggggcgggaatggcgtccacatcgctggacaaacaaactgcgaccgccccgagtggcgagcgcggcacagttgcttagcgcccacctCGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTgg                                                                                               <  8:20204‑M1/50‑1 (MQ=255)                                                         aaccaggggcgggaatggcgtccacatcgctggacaaacaaactgcgaccgccccgagtggcgagcgcggcacagttgcttagcgcccacctCGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTgg                                                                                               >  7:20204‑M1/93‑142 (MQ=255)                                                           aTTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCaa                                                                                    >  8:302238/1‑149 (MQ=255)                                                               ggTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACtgt                                                                                >  2:198268/1‑149 (MQ=255)                                                                 ttACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGgcgc                                                                                           <  6:15021/136‑1 (MQ=255)                                                                 ttACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGgcgc                                                                                           >  5:15021/1‑136 (MQ=255)                                                                 ttACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGc                                                                              >  4:396535/1‑149 (MQ=255)                                                                     gCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCcgcg                                                                          >  4:29865/1‑149 (MQ=255)                                                                       cacaGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACCTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCt                                                                        >  1:129231/1‑149 (MQ=255)                                                                        acaGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTc                                                                       <  3:240845/149‑1 (MQ=255)                                                                        acaGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTCCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTc                                                                       <  7:302757/149‑1 (MQ=255)                                                                            ttCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCa                                                                   >  4:259992/1‑149 (MQ=255)                                                                            ttCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCa                                                                   >  1:6059/1‑149 (MQ=255)                                                                                    tCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCgggg                                                            <  2:242739/148‑1 (MQ=255)                                                                                    tCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGc                                                           >  6:298059/1‑149 (MQ=255)                                                                                    tCATCTACTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAGGCGCCGATTACGTGCCCACCTCATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTc                                                                <  1:329902/148‑1 (MQ=255)                                                                                     cATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGc                                                           <  4:179937/148‑1 (MQ=255)                                                                                      aTCTAGTCACGGCCTATAACATTCTGCGTCATAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCg                                                          <  5:129954/148‑1 (MQ=255)                                                                                       tCTAGTCACGGCCTATAACATTGAACGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGt                                                        >  7:255213/1‑149 (MQ=255)                                                                                       tCTAGTCACGGACTATAAAATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCAAATGTTCGCAT‑ATCTGAGACAGTGAATCATGCACGAGGTTGGCGATAAGCAACTGTGCAGAGCTCGCCACTCGGGGCGGt                                                        >  6:172127/1‑149 (MQ=255)                                                                                                 gCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTc                                                                       >  6:337352/1‑124 (MQ=255)                                                                                                 gCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAgtttgt                                              <  2:220891/149‑1 (MQ=255)                                                                                                  ccTTTAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGc                                                                     <  8:155145/125‑1 (MQ=255)                                                                                                  ccTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGc                                                                     >  7:155145/1‑125 (MQ=255)                                                                                                  ccTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAgtttgtt                                             >  7:175422/1‑149 (MQ=255)                                                                                                  ccTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAgtttgtt                                             <  2:6059/149‑1 (MQ=255)                                                                                                  ccTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAgtttgtt                                             <  3:215834/149‑1 (MQ=255)                                                                                                   cTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAgtttgttt                                            <  5:298059/149‑1 (MQ=255)                                                                                                    tttaACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGtttgtttg                                           >  6:409172/3‑149 (MQ=255)                                                                                                        aCATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTcc                                        <  5:409172/148‑1 (MQ=255)                                                                                                          aTTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGc                                     >  8:182207/1‑149 (MQ=255)                                                                                                              tGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAg                                                   <  7:287295/131‑1 (MQ=255)                                                                                                              tGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAg                                                   >  8:287295/1‑131 (MQ=255)                                                                                                              tGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGAtg                                 >  2:204841/1‑149 (MQ=255)                                                                                                                cGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGAtgt                                <  3:29865/148‑1 (MQ=255)                                                                                                                cGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGAt                                  <  8:383848/146‑1 (MQ=255)                                                                                                                    acaACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGa                                                                                                                     >  4:81118/1‑59 (MQ=255)                                                                                                                    acaACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACg                           <  6:24009/149‑1 (MQ=255)                                                                                                                    acaACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACg                           >  5:258660/1‑149 (MQ=255)                                                                                                                      aaCGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGc                          >  8:164384/1‑148 (MQ=255)                                                                                                                                 gCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATACTGCACGAGGTGGGCGCTAAGCAACTGTTCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCCATGTGGACGCCATTCACGcccc              >  3:232529/1‑149 (MQ=255)                                                                                                                                    cGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTgg           <  7:164384/149‑1 (MQ=255)                                                                                                                                      gAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑AGCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGtt         <  2:374246/149‑1 (MQ=255)                                                                                                                                       aaaG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTg        <  8:255213/149‑1 (MQ=255)                                                                                                                                         aG‑‑GCCGATTACGTG‑‑CATCACATGTTCGCCT‑ATATGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCAACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGCGGCAATTCCCTCCCCTGGTTGc       >  8:221318/1‑148 (MQ=255)                                                                                                                                               ctaTTACGTG‑‑CAGCACATGTTCTACT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAAATGTGCCGCTCTCGCCACTCGGTGCTGTCGCAGTTTGTTTGTACAGCGATGTCGACGCCATTCCCGCCCCTGGTTGCAATaa  <  5:172127/147‑1 (MQ=255)                                                                                                                                               cGATTACGTG‑‑CAGCACATGTTCGCCTGATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAAt    >  1:210595/1‑148 (MQ=255)                                                                                                                                               cGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATaa  <  7:182207/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  GCAATCGAGCTACCCAATAACATCACGTTCGATATGACTGGCAGTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAA  >  NC_002947/2851910‑2852198

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.