New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2852056 =	62 (0.950)	5 (0.080)	4/250	NT	7.5%	coding (486/519 nt)	PP_5531	hypothetical protein
	?	NC_002947	2852100 =	65 (1.060)					intergenic (+11/+194)	PP_5531/PP_2505	hypothetical protein/GAF domain/GGDEF domain‑containing protein

GTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCA  >  NC_002947/2851953‑2852247                                                                                                                                                         |                                                                                                                                                    gTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAg                                                                                                                                                    <  6:142486/149‑1 (MQ=255)   ccccttattgcaaccaggggcgggaatggcgtccacatcgctggacaaacaaactgcgaccgccccgagtggcgagcgcggcacagttgcttagcgcccacctCGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAg                                                                                                                                                    >  4:84250‑M1/104‑149 (MQ=255)   ccccttattgcaaccaggggcgggaatggcgtccacatcgctggacaaacaaactgcgaccgccccgagtggcgagcgcggcacagttgcttagcgcccacctCGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAg                                                                                                                                                    >  4:263217‑M1/104‑149 (MQ=255)    aGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGt                                                                                                                                                  <  4:399694/148‑1 (MQ=255)           aGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCt                                                                                                                                           >  8:204524/1‑148 (MQ=255)             tCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCATAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAg                                                                                                                                        >  6:129954/1‑149 (MQ=255)              cAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAg                                                                                                                                        <  7:204524/148‑1 (MQ=255)              aaccaggggcgggaatggcgtccacatcgctggacaaacaaactgcgaccgccccgagtggcgagcgcggcacagttgcttagcgcccacctCGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTgg                                                                                                                                                >  7:20204‑M1/93‑142 (MQ=255)              aaccaggggcgggaatggcgtccacatcgctggacaaacaaactgcgaccgccccgagtggcgagcgcggcacagttgcttagcgcccacctCGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTgg                                                                                                                                                <  8:20204‑M1/50‑1 (MQ=255)                aTTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCaa                                                                                                                                     >  8:302238/1‑149 (MQ=255)                    ggTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACtgt                                                                                                                                 >  2:198268/1‑149 (MQ=255)                      ttACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGgcgc                                                                                                                                            <  6:15021/136‑1 (MQ=255)                      ttACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGgcgc                                                                                                                                            >  5:15021/1‑136 (MQ=255)                      ttACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGc                                                                                                                               >  4:396535/1‑149 (MQ=255)                          gCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCcgcg                                                                                                                           >  4:29865/1‑149 (MQ=255)                            cacaGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACCTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCt                                                                                                                         >  1:129231/1‑149 (MQ=255)                             acaGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTc                                                                                                                        <  3:240845/149‑1 (MQ=255)                             acaGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTCCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTc                                                                                                                        <  7:302757/149‑1 (MQ=255)                                 ttCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCa                                                                                                                    >  1:6059/1‑149 (MQ=255)                                 ttCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCa                                                                                                                    >  4:259992/1‑149 (MQ=255)                                         tCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCgggg                                                                                                             <  2:242739/148‑1 (MQ=255)                                         tCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGc                                                                                                            >  6:298059/1‑149 (MQ=255)                                         tCATCTACTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAGGCGCCGATTACGTGCCCACCTCATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTc                                                                                                                 <  1:329902/148‑1 (MQ=255)                                          cATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGc                                                                                                            <  4:179937/148‑1 (MQ=255)                                           aTCTAGTCACGGCCTATAACATTCTGCGTCATAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCg                                                                                                           <  5:129954/148‑1 (MQ=255)                                            tCTAGTCACGGCCTATAACATTGAACGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGt                                                                                                         >  7:255213/1‑149 (MQ=255)                                            tCTAGTCACGGACTATAAAATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCAAATGTTCGCAT‑ATCTGAGACAGTGAATCATGCACGAGGTTGGCGATAAGCAACTGTGCAGAGCTCGCCACTCGGGGCGGt                                                                                                         >  6:172127/1‑149 (MQ=255)                                                      gCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTc                                                                                                                        >  6:337352/1‑124 (MQ=255)                                                      gCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAgtttgt                                                                                               <  2:220891/149‑1 (MQ=255)                                                       ccTTTAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGc                                                                                                                      <  8:155145/125‑1 (MQ=255)                                                       ccTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGc                                                                                                                      >  7:155145/1‑125 (MQ=255)                                                       ccTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAgtttgtt                                                                                              >  7:175422/1‑149 (MQ=255)                                                       ccTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAgtttgtt                                                                                              <  3:215834/149‑1 (MQ=255)                                                       ccTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAgtttgtt                                                                                              <  2:6059/149‑1 (MQ=255)                                                        cTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAgtttgttt                                                                                             <  5:298059/149‑1 (MQ=255)                                                         tttaACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGtttgtttg                                                                                            >  6:409172/3‑149 (MQ=255)                                                             aCATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTcc                                                                                         <  5:409172/148‑1 (MQ=255)                                                               aTTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGc                                                                                      >  8:182207/1‑149 (MQ=255)                                                                   tGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAg                                                                                                    >  8:287295/1‑131 (MQ=255)                                                                   tGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAg                                                                                                    <  7:287295/131‑1 (MQ=255)                                                                   tGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGAtg                                                                                  >  2:204841/1‑149 (MQ=255)                                                                     cGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGAtgt                                                                                 <  3:29865/148‑1 (MQ=255)                                                                     cGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGAt                                                                                   <  8:383848/146‑1 (MQ=255)                                                                         acaACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACg                                                                            >  5:258660/1‑149 (MQ=255)                                                                         acaACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACg                                                                            <  6:24009/149‑1 (MQ=255)                                                                           aaCGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGc                                                                           >  8:164384/1‑148 (MQ=255)                                                                                      gCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATACTGCACGAGGTGGGCGCTAAGCAACTGTTCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCCATGTGGACGCCATTCACGcccc                                                               >  3:232529/1‑149 (MQ=255)                                                                                         cGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTgg                                                            <  7:164384/149‑1 (MQ=255)                                                                                           gAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑AGCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGtt                                                          <  2:374246/149‑1 (MQ=255)                                                                                            aaaG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTg                                                         <  8:255213/149‑1 (MQ=255)                                                                                              aG‑‑GCCGATTACGTG‑‑CATCACATGTTCGCCT‑ATATGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCAACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGCGGCAATTCCCTCCCCTGGTTGc                                                        >  8:221318/1‑148 (MQ=255)                                                                                                    ctaTTACGTG‑‑CAGCACATGTTCTACT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAAATGTGCCGCTCTCGCCACTCGGTGCTGTCGCAGTTTGTTTGTACAGCGATGTCGACGCCATTCCCGCCCCTGGTTGCAATaa                                                   <  5:172127/147‑1 (MQ=255)                                                                                                    cGATTACGTG‑‑CAGCACATGTTCGCCTGATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAAt                                                     >  1:210595/1‑148 (MQ=255)                                                                                                    cGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATaa                                                   <  7:182207/149‑1 (MQ=255)                                                                                                       ccacctcgtgcaggattcactgtcgcagataggcgaacatgtgctgcacgAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGtt                                                          >  7:20204‑M2/51‑142 (MQ=255)                                                                                                       ccacctcgtgcaggattcactgtcgcagataggcgaacatgtgctgcacgAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGtt                                                          <  8:20204‑M2/92‑1 (MQ=255)                                                                                                           ctcgtgcaggattcactgtcgcagataggcgaacatgtgctgcacgAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAgggg                                               >  4:263217‑M2/47‑149 (MQ=255)                                                                                                           ctcgtgcaggattcactgtcgcagataggcgaacatgtgctgcacgAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAgggg                                               >  4:84250‑M2/47‑149 (MQ=255)                                                                                                           GTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACg                                                                            <  8:211651‑M1/117‑1 (MQ=255)                                                                                                           GTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACg                                                                            >  7:211651‑M1/1‑117 (MQ=255)                                                                                                           GTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGggc                                              >  8:125568‑M1/1‑147 (MQ=255)                                                                                                           GTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGggc                                              <  7:125568‑M1/147‑1 (MQ=255)                                                                                                                 AGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGAt                                        <  8:306513‑M1/149‑1 (MQ=255)                                                                                                                  GCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGAt                                        <  1:395813‑M1/148‑1 (MQ=255)                                                                                                                  GCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGAt                                        <  6:117759‑M1/148‑1 (MQ=255)                                                                                                                   cacaTGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGAt                                        >  3:140768/1‑147 (MQ=255)                                                                                                                   cacaTGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCa                                      <  5:378442/149‑1 (MQ=255)                                                                                                                   cacaTGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCa                                      <  7:302238/149‑1 (MQ=255)                                                                                                                    acaTGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAg                                     <  8:175422/149‑1 (MQ=255)                                                                                                                     caTGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGt                                    >  7:365764/1‑149 (MQ=255)                                                                                                                      aTGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGtt                                   >  6:281766/1‑149 (MQ=255)                                                                                                                      aTGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGtt                                   <  4:140768/149‑1 (MQ=255)                                                                                                                      aTGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGtt                                   >  7:201622/1‑149 (MQ=255)                                                                                                                         ttCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGAGCAGTTGa                                 >  2:153383/1‑148 (MQ=255)                                                                                                                           cGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGaaa                               <  1:198268/148‑1 (MQ=255)                                                                                                                            gCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGc                             <  3:259992/149‑1 (MQ=255)                                                                                                                             tcgcagataggcgaacatgtgctgcacgAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGaaa                               <  3:263217‑M2/119‑1 (MQ=255)                                                                                                                             ccT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGc                             >  8:144643/1‑148 (MQ=255)                                                                                                                                      cGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCt                        <  7:306513/145‑1 (MQ=255)                                                                                                                                      cGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGAt                     <  8:201622/148‑1 (MQ=255)                                                                                                                                      cGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATc                    <  3:11547/149‑1 (MQ=255)                                                                                                                                       gACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGCTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGAt                     >  6:388997/1‑147 (MQ=255)                                                                                                                                          aGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGc                <  8:365764/149‑1 (MQ=255)                                                                                                                                              aaTCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAAt            >  2:341718/1‑149 (MQ=255)                                                                                                                                                     cacgAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGggcgg                                            <  3:53819‑M2/106‑1 (MQ=255)                                                                                                                                                     cacgAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGggcgg                                            >  4:53819‑M2/5‑110 (MQ=255)                                                                                                                                                     cacgAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAAc     >  7:315486‑M2/5‑149 (MQ=255)                                                                                                                                                        gAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCa  <  1:204841‑M2/148‑1 (MQ=255)                                                                                                                                                         |                                                                                                                                                    GTGAGTACGCAGTCAATTGGGTTACGCCACAGTTCTACTTTCATCTAGTCACGGCCTATAACATTCTGCGTCACAACGGCGTTCCGCTCGGAAAG‑‑GCCGATTACGTG‑‑CAGCACATGTTCGCCT‑ATCTGCGACAGTGAATCCTGCACGAGGTGGGCGCTAAGCAACTGTGCCGCGCTCGCCACTCGGGGCGGTCGCAGTTTGTTTGTCCAGCGATGTGGACGCCATTCCCGCCCCTGGTTGCAATAAGGGGCGGCGATCAGTTGAAAGCGAGCTGATCAGGCAAATTGGTAACTCA  >  NC_002947/2851953‑2852247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.