New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3394320	49 (0.750)	4 (0.070)	4/244	NT	8.9%	coding (87/900 nt)	PP_2997	protein CnmA
	?	NC_002947	= 3394357	37 (0.620)					coding (50/900 nt)	PP_2997	protein CnmA

CTCGCGGCACGGCCCTATCAGCTGATCGGCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCATTATTGAAATTCTCAATAGCTGTATTGAGGGCATTGTATAGCGCAAATAAACCCCGCTG  >  NC_002947/3394176‑3394464                                                                                                                                                 |                                                                                                                                                  cTCGCGGCACGGCCCTATCAGCTGATCGGCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTcggc‑gg                                                                                                                                              >  5:35383/1‑149 (MQ=255) cTCGCGGCACGGCCCTATCAGCTGATCGGCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTcggc‑gg                                                                                                                                              >  6:180738/1‑149 (MQ=255)    gcgGCACGGCCCTATCAGCTGATCGGCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑Ggcgc                                                                                                                                           <  3:287879/149‑1 (MQ=255)      ggCACGGCCCTATCAGCTGATCGGCGCGCGGGGTAGGGTCCATGCCGCCTGGCGTGCGCACGAACAGCGGGGCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCgg                                                                                                                                         <  5:234879/149‑1 (MQ=255)       gCACGGCCCTATCAGCTGATCGGCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCggg                                                                                                                                        <  5:272335/149‑1 (MQ=255)             cccTATCAGCTGATCGGCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGacgtgctgtatcaatg                                                                                                                                   >  1:147564‑M1/1‑133 (MQ=255)             cccTATCAGCTGATCGGCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGc                                                                                                                                  >  3:384730/1‑149 (MQ=255)                  tCAGCTGATCGGCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGc                                                                                                                               <  4:384730/147‑1 (MQ=255)                  tCAGCTGATCGGCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCgg                                                                                                                             <  6:35383/149‑1 (MQ=255)                      cTGATCGGCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCAtt                                                                                                                         <  5:180738/149‑1 (MQ=255)                          tCGGCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATa                                                                                                                     >  6:215108/1‑149 (MQ=255)                           cGGCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATa                                                                                                                     >  7:52119/1‑148 (MQ=255)                            ggCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACa                                                                                                                   <  5:215108/149‑1 (MQ=255)                               gcgcgGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGacgtgctgtatcaatgccgcagcgtgacccgcgc                                                                                                                 >  5:106062‑M1/1‑115 (MQ=255)                                  cgGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGt                                                                                                             <  4:299257/149‑1 (MQ=255)                                       tAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGacgtgctgtatcaatgccgcagcgtgacccgcgccgccgaac                                                                                                         <  6:106062‑M1/149‑43 (MQ=255)                                         ggggCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTcgaacag                                                                                                      >  1:51867‑M2/1‑142 (MQ=255)                                            gCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGacgtgctgtatcaatgccgcagcgtgacccgcgccgccgaacagctg                                                                                                    <  2:147564‑M1/149‑48 (MQ=255)                                            gCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTcgaacagctg                                                                                                   >  2:313018‑M2/1‑139 (MQ=255)                                              cATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATa                                                                                                                     <  3:27199/129‑1 (MQ=255)                                              cATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATa                                                                                                                     >  4:27199/1‑129 (MQ=255)                                                 gccgccTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTgcag                                                                                                >  8:77189/1‑147 (MQ=255)                                                    gccTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCt                                                                                           >  4:44072/1‑149 (MQ=255)                                                    gccTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCCCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACa                                                                                                                   >  8:214532/1‑125 (MQ=255)                                                    gccTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCCCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACa                                                                                                                   <  7:214532/125‑1 (MQ=255)                                                      cTGGCCTGCGGACGAAGAGCGGGTCGTTCAATTGCTCGCGCAGGGGCGCCAGCCAGATCCTGATGGCGGGCTGGCTCAGCCGCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGGACGTCGAACAGCAGCAGCAGCTTg                                                                                         <  7:382206/149‑1 (MQ=255)                                                        ggCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTggg                                                                                       >  1:296236/1‑149 (MQ=255)                                                          cGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGtt                                                                                     <  3:44072/149‑1 (MQ=255)                                                                  cGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAgg                                                                             <  5:250069/149‑1 (MQ=255)                                                                  cGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAgg                                                                             <  5:384938/149‑1 (MQ=255)                                                                            gTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAggg                                                                   <  2:296236/149‑1 (MQ=255)                                                                            gTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAggg                                                                   <  5:239504/149‑1 (MQ=255)                                                                               gTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAg                                                                >  5:373935/1‑149 (MQ=255)                                                                                   aaTTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCat                                                            >  3:209957/1‑149 (MQ=255)                                                                                   aaTTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCat                                                            >  2:200139/1‑149 (MQ=255)                                                                                    aTTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCatt                                                           <  8:52119/149‑1 (MQ=255)                                                                                    aTTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCatt                                                           >  3:133544/1‑149 (MQ=255)                                                                                     ttGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCatta                                                          <  2:267284/149‑1 (MQ=255)                                                                                        cTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCattatt                                                        >  7:165316/1‑148 (MQ=255)                                                                                        cTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCattatt                                                        <  4:209957/148‑1 (MQ=255)                                                                                           gcgcAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAg                                                                     <  2:8266/132‑1 (MQ=255)                                                                                           gcgcAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAg                                                                     >  1:8266/1‑132 (MQ=255)                                                                                           gcgcAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCATTATTGaaa                                                    >  7:293956/1‑149 (MQ=255)                                                                                           gcgcAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCATTATTGaaa                                                    >  1:296081/1‑149 (MQ=255)                                                                                           gcgcAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCATTATTGaa                                                     <  7:77189/148‑1 (MQ=255)                                                                                               aGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCATTATTGAAATtct                                                <  8:165316/149‑1 (MQ=255)                                                                                                ggCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCATTATTGAAATtctc                                               <  8:140729/149‑1 (MQ=255)                                                                                                   gcgcCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTcgaacagctg                                                                                                   >  5:199032‑M2/1‑84 (MQ=255)                                                                                                   gcgcCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTcgaacagctg                                                                                                   <  6:199032‑M2/94‑11 (MQ=255)                                                                                                     gccagccaGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCATTATTGAAATTCTCAATAg                                          >  4:334651/1‑149 (MQ=255)                                                                                                                   gATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCATTATTGAAATTCTCAATAGCTGTATTGAGGGCa                            >  6:360813/1‑149 (MQ=255)                                                                                                                     tGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCATTATTGAAATTCTCAATAGCTGTATTGAGGGCAtt                          <  4:133544/149‑1 (MQ=255)                                                                                                                     tGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCATTATTGAAATTCTCAATAGCTGTATTGAGGGCAtt                          <  7:25037/149‑1 (MQ=255)                                                                                                                           gctggctCTGCCCCAGCTGTTCGGCGGGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAg                                                                     >  1:218118/1‑101 (MQ=255)                                                                                                                            ctggctCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCATTATTGAAATTCTCAATAGCTGTAt                                    >  2:221421/1‑132 (MQ=255)                                                                                                                            ctggctCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCATTATTGAAATTCTCAATAGCTGTAt                                    <  1:221421/132‑1 (MQ=255)                                                                                                                                     ccccAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCATTATTGAAATTCTCAATAGCTGTATTGAGGGCATTGTATAGCGCAAAt             <  8:293956/146‑1 (MQ=255)                                                                                                                                      tccttgtGTTCGGG‑TGCGGGTGTCTCGCTGCGGCATTGTTACAGCATGTCGTACAGTTGCATCAGCTTGGGTTCGGGCAGGGCCTCCATGGTAGTCATTATTGAAATTCTCAATAGCTGTATTGAGGGCATTGTATAGCGCAAATaaa          <  8:254006/142‑1 (MQ=255)                                                                                                                                      cccAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCATTATTGAAATTCTCAATAGCTGTATAGAGGGCATTGTATAGCGCAAATAAAc         >  7:80339/1‑149 (MQ=255)                                                                                                                                        cAGCTGTTCGacgtgctgtatcaatgccgcagcgtgacccgcgccgccgaacagctggggcagagccagccgaccatcagcatctggctggcgcgcctgcgcgagcaattgaacgacccgctgttcgtgcgcacgccaggcggcatggc        >  2:313018‑M1/1‑10 (MQ=255)                                                                                                                                        cAGCTGTTCGacgtgctgtatcaatgccgcagcgtgacccgcgccgccgaacagctggggcagagccagccgaccatcagcatctggctggcgc                                                               <  6:199032‑M1/94‑85 (MQ=255)                                                                                                                                        cAGCTGTTCGacgtgctgtatcaatgccgcagcgtgacccgcgccgccgaacagctggggcagagccagccgaccatcagcatctggctggcgc                                                               >  5:199032‑M1/1‑10 (MQ=255)                                                                                                                                        cAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTcgaacagctggggcagagccagccgaccatcagcatctggctggcgcgcctgcgcgagcaattgaacgacccgctgttcgtgcgcacgccaggcggcatggc       <  2:147564‑M2/149‑103 (MQ=255)                                                                                                                                           cTGTTCGacgtgctgtatcaatgccgcagcgtgacccgcgccgccgaacagctggggcagagccagccgaccatcagcatctggctggcgcgcctgcgcgagcaattgaacgacccgctgttcgtgcgcacgccaggcggcatggcccc     >  1:51867‑M1/1‑7 (MQ=255)                                                                                                                                             gTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTcgaacagctggggcagagccagccgaccatcagcatctggctggcgcgcctgcgcgagcaattgaacgacccgctgttcgtgcgcacgccaggcggcatggccccta  <  6:106062‑M2/149‑108 (MQ=255)                                                                                                                                                 |                                                                                                                                                  CTCGCGGCACGGCCCTATCAGCTGATCGGCGCGCGGGGTAGGGGCCATGCCGCCTGGCGTGCGCACGAACAGCGGGTCGTTCAATTGCTCGCGCAGGCGCGCCAGCCAGATGCTGATGGTCGGCTGGCTCTGCCCCAGCTGTTCGGC‑GGCGCGGGTCACGCTGCGGCATTGATACAGCACGTCGAACAGCTGCAGCAGCTTGGGTTCGGGCAGGGCCTCCAGGGTAGTCATTATTGAAATTCTCAATAGCTGTATTGAGGGCATTGTATAGCGCAAATAAACCCCGCTG  >  NC_002947/3394176‑3394464

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.