New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3490531	64 (0.980)	4 (0.060)	4/254	NT	6.4%	coding (860/2637 nt)	clpV	protein ClpV1
	?	NC_002947	= 3490575	55 (0.880)					coding (816/2637 nt)	clpV	protein ClpV1

GCTTGAGCAGGTTGGCGGCATCGTTCTGCCCGGCCTGGCCGCCGGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATGCGCAGCGCCAGGCCTTCGACCACGGCGGTTTTGCCGACCCCGGCTTCGCCCGTGAGGAT  >  NC_002947/3490385‑3490679                                                                                                                                                    |                                                                                                                                                     gCTTGAGCAGGTTGGCGGCATCGTTCTGCCCGGCCTGGCCGCCGGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCtt                                                                                                                                                     >  7:27987/1‑148 (MQ=255)      aGCAGGTTGGCGGCATCGTTCTGCCCGGCCTGGCCGCCGGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTTCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCTAACTCGCCCTTGAcccc                                                                                                                                               <  6:292139/149‑1 (MQ=255)       gCAGGTTGGCGGCATCGTTCTGCCCGGCCTGGCCGCCGGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCg                                                                                                                                              >  4:272962/1‑149 (MQ=255)          ggTTGGCGGCATCGTTCTGCCCGGCCTGGCCGCCGGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGgcg                                                                                                                                           >  4:363032/1‑149 (MQ=255)              ggcggcATCGTTCTGCCCGGCCTGGCCGCCGGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCg                                                                                                                                        <  5:141593/148‑1 (MQ=255)                   gctCGTTCTGCCCGGCCTGGCCGCCGGAGCCGATCTGGGTGGGGGCTTGGTCGATGAACAGGAGGATCGGGTGCAGGCTGCGGTTGACCTCTTCGATCACAGCCTTGAGGCGGATC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGt                                                                                                                                  <  1:265339/147‑1 (MQ=255)                   cATCGTTCTGCCCGGCCTGGCCGCCGGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGt                                                                                                                                  <  2:245621/149‑1 (MQ=255)                       gTTCTGCCCGGCCTGGCCGCCGGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGCCCTCTTCGATCACAGCCTTGCGCCGGTTC‑TCGAACTCGCCCTTGCCCCCGGCGCCGCCCTGTaag                                                                                                                               >  2:265339/1‑147 (MQ=255)                        ttCTGCCCGGCCTGGCCGCCGGAGCCGAACAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAg                                                                                                                             >  1:228617/1‑149 (MQ=255)                            gCCCGGCCTGGCCGCCGGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGcc                                                                                                                          >  2:140091/1‑148 (MQ=255)                             cccGGCCTGGCCGCCGGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGc                                                                                                                           <  2:351448/146‑1 (MQ=255)                             cccGGCCTGGCCGCCGGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGc                                                                                                                           >  1:351448/1‑146 (MQ=255)                              ccGGCCTGGCCGCCGGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGACGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCg                                                                                                                                              >  2:34240/1‑126 (MQ=255)                              ccGGCCTGGCCGCCGGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGACGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTCAGGCGGTTC‑TCGAACTCGCCCTTGACCCCg                                                                                                                                              <  1:34240/126‑1 (MQ=255)                                      gccgccGGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTACCAGGCCCAGGTCGAggg                                                                                                               >  8:219516/1‑149 (MQ=255)                                      gccgccGGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAggg                                                                                                               >  8:225379/1‑149 (MQ=255)                                      gccgccGGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAgg                                                                                                                <  3:272962/148‑1 (MQ=255)                                        cgccgGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCGTCGATCACCGCCTTGCGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACCGGCCCAGGTCGAGGgtg                                                                                                             >  6:348756/1‑149 (MQ=255)                                           cgGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAgg                                                                                                                      >  8:372943/1‑137 (MQ=255)                                           cgGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAgg                                                                                                                      <  7:372943/137‑1 (MQ=255)                                               gCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCaggg                                                                                                      >  1:143306‑M2/1‑145 (MQ=255)                                                  gATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTgcacaccctcgacctgggcctgttacaggccggcgccggggtcaagggcga                                                                                                   <  3:70375‑M1/149‑52 (MQ=255)                                                   aTCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGTGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCACCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAAc                                                                                                  <  7:195979/149‑1 (MQ=255)                                                   aTCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAgg                                                                                                                >  6:134124/1‑135 (MQ=255)                                                   aTCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAgg                                                                                                                <  5:134124/135‑1 (MQ=255)                                                   aTCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAAc                                                                                                  <  8:27987/149‑1 (MQ=255)                                                    tCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACg                                                                                                 <  3:363032/149‑1 (MQ=255)                                                    tCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACg                                                                                                 >  7:269485/1‑149 (MQ=255)                                                      aGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTgcacaccctcgacctgggcctgttacaggccggcgccggggtcaagggcgagtt                                                                                                <  5:296108‑M1/148‑55 (MQ=255)                                                      aGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTc                                                                                               >  7:260634/1‑149 (MQ=255)                                                        ggTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTgcacaccctcgacctgggcctgttacaggccggcgccggggtcaagggc                                                                                                     <  6:215517‑M1/141‑50 (MQ=255)                                                        ggTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTgcacaccctcgacctgggcctgttacaggccggcgccggggtcaagggc                                                                                                     >  5:215517‑M1/1‑92 (MQ=255)                                                        ggTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCt                                                                                             >  2:117842/1‑149 (MQ=255)                                                        ggTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCt                                                                                             >  6:94794/1‑149 (MQ=255)                                                         gtgtGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCtt                                                                                            <  7:331083/149‑1 (MQ=255)                                                           gtgGCCTTCGTCGATGACCAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGa                                                                                          <  7:361920/149‑1 (MQ=255)                                                              ggCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCa                                                                                       >  5:297296/1‑149 (MQ=255)                                                                   cgtcgATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCAccgc                                                                                   <  6:297296/148‑1 (MQ=255)                                                                        aTGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCAc                                                                             >  4:275146/1‑149 (MQ=255)                                                                            aCAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAACACCGCCGGCACGTCa                                                                         >  4:373408/1‑149 (MQ=255)                                                                                gatgatCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTc                                                                                               >  4:75546/1‑123 (MQ=255)                                                                                gatgatCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTc                                                                                               <  3:75546/123‑1 (MQ=255)                                                                                gatgatCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCt                                                                     >  5:194718/1‑149 (MQ=255)                                                                                gatgatCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCt                                                                     >  7:291740/1‑149 (MQ=255)                                                                                  tgatCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTgg                                                                   <  8:291740/149‑1 (MQ=255)                                                                                   gatCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTggg                                                                  >  4:289871/1‑149 (MQ=255)                                                                                     tCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAg                                                                                         <  4:370602/124‑1 (MQ=255)                                                                                     tCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAg                                                                                         >  3:370602/1‑124 (MQ=255)                                                                                        ggTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATg                                                             <  1:117842/149‑1 (MQ=255)                                                                                            cAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATgcgc                                                          <  3:275146/148‑1 (MQ=255)                                                                                                        gACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATGCGCAGCGCCAGGCCtt                                             >  4:60404/1‑149 (MQ=255)                                                                                                         aCCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATGCGCAGCGCCAGGCCTTc                                            <  5:94794/149‑1 (MQ=255)                                                                                                         aCCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATGCGCAGCGCCAGGCCTTc                                            <  2:228617/149‑1 (MQ=255)                                                                                                            tctTCGATCACAGCCTTGAGGTGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATGCGCAGCGCCAGGCCTTCGAc                                         >  2:263143/1‑149 (MQ=255)                                                                                                             ctTCGATCACAGCCTTGAGGCGCTTC‑TCGAACTCGCCCTTGACCCCGGAGCCGGCCTGTAACAGCCCCAGGTCGACGCTGTGCAGGGCAACGTCCTTGAGCAAAGCCGGCACGTCACCCTGGGCGATGCGCAGCGCCAGTCCTTCGAc                                         >  8:365374/1‑148 (MQ=255)                                                                                                              ttCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATGCGCAGCGCCAGGCCTTCGACCa                                       >  4:77804/1‑149 (MQ=255)                                                                                                              ttCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATGCGCAGCGCCAGGCCTTCGACCa                                       >  8:69829/1‑149 (MQ=255)                                                                                                                      caGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCAcc                                                                       <  2:177547/109‑1 (MQ=255)                                                                                                                      caGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCAcc                                                                       >  1:177547/1‑109 (MQ=255)                                                                                                                      caGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTggg                                                                  >  4:6430/1‑114 (MQ=255)                                                                                                                      caGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTggg                                                                  <  3:6430/114‑1 (MQ=255)                                                                                                                        gCCTTGAGGCGGGCCATCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATGCGCAGCGCCAGGCCTTCGACCACGGCGGttt                              <  1:140091/149‑1 (MQ=255)                                                                                                                         ccTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCAGTAAAAGGCCCCTGTCGAGGGGGTTGAGGGCAAAGTACTTGAGCACCCCCGGCCCCTACCCCGGGGCGCAGGGCCGCCCCAGGCCTTCGGCCACCGCGTGTTTg                            >  6:276726/1‑149 (MQ=255)                                                                                                                          cTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTATCAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATGCGCAGCGCCAGGCCTTCGACCACGGCTGTTTTGc                           <  7:365374/149‑1 (MQ=255)                                                                                                                               ggCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATGCGCAGCGCCAGGCCTTCGACCACGGCGGTTTTGCCGAcc                      >  2:342882/1‑149 (MQ=255)                                                                                                                                        tcGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATGCGCAGCGCCAGGCCTTCGACCACGGCGGTTTTGCCGACCCCGGCTTc              >  7:272074/1‑149 (MQ=255)                                                                                                                                         cGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGCTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCAACCTCGGCGATGCGCAGCGCCATCCCGTCGACCACGGCGCTTATGCAGACCCCTGCttag             >  4:38434/1‑147 (MQ=255)                                                                                                                                          gAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATGCGCAGCACCAGGCCTTCGACCACGGCGGTTTTGCCGACCCCGGCTTCGc            >  1:259949/1‑149 (MQ=255)                                                                                                                                           aaCTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCagggcgagttcgagaaccgcctcaaggctgtgatcgaagaggtcaagcgcagcctgcacccgatcatcctgttcatcgacgaagcccacaccct            <  5:296108‑M2/148‑95 (MQ=255)                                                                                                                                           aaCTCGCCCTAGACCCCGGCGCCGGCATGTAACACGCCCAGGTCGAGGGTGTGCAGGGCAACCTCCTTGAGCACCGCCGGCACGTCACACTGGGCGATGCGCAGCGCCAGGCCTAAGACCACGGCGGTTTTGCCGACCACGGCTTCGcc           >  4:182201/1‑149 (MQ=255)                                                                                                                                             cTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATGCGCAGCGCCAGGCCTTCGACCACGGCGGTTTTGCCGACCCCGGCTTCGCCCg         >  3:62444/1‑149 (MQ=255)                                                                                                                                              tCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCagggcgagttcgagaaccgcctcaaggctgtgatcgaagaggtcaagcgcagcctgcacccgatcatcctgttcatcgacgaagcccacaccctgatc        <  3:70375‑M2/149‑99 (MQ=255)                                                                                                                                                gCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCagggcgagttcgagaaccgcctcaaggctgtgatcgaagaggtcaagcgcagcctgcacccgatcatcctgttcatcgacgaagcccacacc              >  5:215517‑M2/1‑49 (MQ=255)                                                                                                                                                gCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCagggcgagttcgagaaccgcctcaaggctgtgatcgaagaggtcaagcgcagcctgcacccgatcatcctgttcatcgacgaagcccacacc              <  6:215517‑M2/141‑93 (MQ=255)                                                                                                                                                gCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATGCGCAGCGCCAGGCCTTCGACCACGGCGGTTTTGCCGACCCCGGCTTCGCCCGTGa      <  8:260634/149‑1 (MQ=255)                                                                                                                                                gCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATGCGCAGCGCCAGGCCTTCGACCACGGCGGTTTTGCCGACCCCGGCTTCGCCCGTGa      <  3:60404/149‑1 (MQ=255)                                                                                                                                                 cccTgcacaccctcgacctgggcctgttacaggccggcgccggggtcaagggcgagttcgagaaccgcctcaaggctgtgatcgaagaggtcaagcgcagcctgcacccgatcatcctgttcatcgacgaagcccacaccctgatcggc     >  1:143306‑M1/1‑4 (MQ=255)                                                                                                                                                    ttGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATGCGCAGCGCCAGGCCTTCGACCACGGCGGTTTTGCCGACCCCGGCTTCGCCCGTGAGGAt  >  7:206291/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GCTTGAGCAGGTTGGCGGCATCGTTCTGCCCGGCCTGGCCGCCGGAGCCGATCAGGGTGTGGGCTTCGTCGATGAACAGGATGATCGGGTGCAGGCTGCGCTTGACCTCTTCGATCACAGCCTTGAGGCGGTTC‑TCGAACTCGCCCTTGACCCCGGCGCCGGCCTGTAACAGGCCCAGGTCGAGGGTGTGCAGGGCAACGTCCTTGAGCACCGCCGGCACGTCACCCTGGGCGATGCGCAGCGCCAGGCCTTCGACCACGGCGGTTTTGCCGACCCCGGCTTCGCCCGTGAGGAT  >  NC_002947/3490385‑3490679

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.