New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4027966 =	53 (0.810)	4 (0.060)	4/256	NT	8.0%	coding (464/1407 nt)	PP_3552	two‑component system sensor histidine kinase
	?	NC_002947	4028017 =	41 (0.650)					coding (413/1407 nt)	PP_3552	two‑component system sensor histidine kinase

GCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCGGGAAATCAGGTCGGTGGTGTTTTCGATGATCAGCCGATACAGGCGTCGGGCGCGGTTGG  >  NC_002947/4027819‑4028113                                                                                                                                                    |                                                                                                                                                    gCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCTTCGTGTGGTAGCCGTCCTGGTCCAGTGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAg                                                                                                                                                     <  7:232188/148‑1 (MQ=255)  cccGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAgg                                                                                                                                                    >  8:387241/1‑148 (MQ=255)   ccGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCa                                                                                                                                                  >  7:185989/1‑149 (MQ=255)     ttcTGGAGATTTCTAAGCAACGGTAGCCTCCTGTGGCCTGGGGTACCCGGCAGGTGATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGGCTGGCGGAGTACATGTCGACGCTCGCGCGGATGCAGGAGGGTATGTACAGGCATg                                                                                                                                                <  4:398197/147‑1 (MQ=255)            gATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCa                                                                                                                                         <  1:69795/149‑1 (MQ=255)                    aCCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCg                                                                                                                                 <  1:159277/149‑1 (MQ=255)                      cAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCggg                                                                                                                               >  6:91246/1‑149 (MQ=255)                          ggTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCcac                                                                                                                           <  7:387241/149‑1 (MQ=255)                           gTAACCTCCTGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCcaca                                                                                                                          <  8:319665/149‑1 (MQ=255)                            tAGCCTCTTGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAg                                                                                                                                                     <  6:400106/121‑1 (MQ=255)                               cctcctGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCa                                                                                                                                         >  6:229706/1‑130 (MQ=255)                               cctcctGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCa                                                                                                                                         <  5:229706/130‑1 (MQ=255)                               cctcctGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGcc                                                                                                                      <  6:4471/149‑1 (MQ=255)                                ctcctGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCg                                                                                                                     <  4:176539/149‑1 (MQ=255)                                 tcctGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGATAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGcc                                                                                                                      >  1:66814/1‑147 (MQ=255)                                     gTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAg                                                                                                                >  6:235031/1‑149 (MQ=255)                                        ggcTGGGGTAGCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCGAGCGCGGCTGCGGCCTGGCGCAGTAGCTGACGCCGCTCGCGCGGATGCTGCAGGGTATGTACAGGCATGCCACGGAGCTGGTCGGGCCACAGGCCGAGCAGGCg                                                                                                             <  6:204871/147‑1 (MQ=255)                                         ccTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGGTGCTCGGGCCACAGGc                                                                                                                       <  6:193717/138‑1 (MQ=255)                                         ccTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGc                                                                                                                       >  5:193717/1‑138 (MQ=255)                                          cacgcgaagccaaccgcgcccgacgcctgtatcggctgatcatcgaaaacaccaccgacctgatttcccggcacagccccgatggccgctttctcgatgcctcaccGGCAGCCTAC‑C‑GCTGCTCGGGCCACAGGCCGAGCAGGCGGTAg                                                                                                         >  3:176450‑M1/107‑149 (MQ=255)                                             gCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTa                                                                                                          <  5:363123/147‑1 (MQ=255)                                                  gccaaccgcgcccgacgcctgtatcggctgatcatcgaaaacaccaccgacctgatttcccggcacagccccgatggccgctttctcgatgcctcaccGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGcc                                                                                                   >  3:362614‑M1/99‑149 (MQ=255)                                                   ccaaccgcgcccgacgcctgtatcggctgatcatcgaaaacaccaccgacctgatttcccggcacagccccgatggccgctttctcgatgcctcaccGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCg                                                                                                  <  6:229613‑M1/52‑1 (MQ=255)                                                   ccGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCg                                                                                                  >  8:341366/1‑149 (MQ=255)                                                   ccGGCAGGTCATCGTGGGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCg                                                                                                  <  7:95654/149‑1 (MQ=255)                                                       ccgcgcccgacgcctgtatcggctgatcatcgaaaacaccaccgacctgatttcccggcacagccccgatggccgctttctcgatgcctcaccGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGa                                                                                              >  5:229613‑M1/94‑149 (MQ=255)                                                       cAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGa                                                                                              <  4:285951/149‑1 (MQ=255)                                                              tCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATc                                                                                        >  1:397301/1‑148 (MQ=255)                                                                gtgtGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCgag                                                                                     <  8:185989/149‑1 (MQ=255)                                                                   tgGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCgaga                                                                                    >  8:173391/1‑147 (MQ=255)                                                                   tgGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCgaga                                                                                    >  2:239874/1‑147 (MQ=255)                                                                     gTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATg                                                                                                                                                >  4:348644/1‑85 (MQ=255)                                                                     gTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATg                                                                                                                                                <  3:348644/85‑1 (MQ=255)                                                                      tAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCg                                                                               >  2:386876/1‑149 (MQ=255)                                                                        gCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGc                                                                             >  3:271913/1‑149 (MQ=255)                                                                          cGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGATAAAGCGGCCa                                                                           <  1:239874/149‑1 (MQ=255)                                                                           gTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCAt                                                                          >  1:312239/1‑149 (MQ=255)                                                                           gTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCAt                                                                          <  1:386876/149‑1 (MQ=255)                                                                              cTGGTCCAGGGCGGCAGCGGCCTTTCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGCGTATGTAGAGGCATGCCACGCATCTGCTCGTGCCAGAGGCCGAGCAGGCGGTTGGCTGCCGGTGAGGCTTCGAGAAAGCGGCCATCg                                                                        <  5:19742/148‑1 (MQ=255)                                                                                         cgGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCgg                                                            <  2:397301/149‑1 (MQ=255)                                                                                         cgGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCgg                                                            <  2:66814/149‑1 (MQ=255)                                                                                          ggCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCgg                                                            >  7:136323/1‑148 (MQ=255)                                                                                                ggCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCGGGAAATCa                                                     <  2:312239/149‑1 (MQ=255)                                                                                                 gCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCGGGAAATCAg                                                    <  5:91246/149‑1 (MQ=255)                                                                                                  ccTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCGGGAAATCAgg                                                   <  4:171466/149‑1 (MQ=255)                                                                                                      gcgcAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCGGGAAATCAGGTCgg                                               >  1:3561/1‑149 (MQ=255)                                                                                                       cgcAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCGGGAAATCAGGTCggt                                              >  4:183468/1‑149 (MQ=255)                                                                                                             aCCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCGGGAAATCAGGTCGGTGGTGtt                                        >  7:340707/1‑149 (MQ=255)                                                                                                               cTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCggg                                                                                                                               >  3:87125/1‑60 (MQ=255)                                                                                                               cTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCggg                                                                                                                               <  4:87125/60‑1 (MQ=255)                                                                                                               cTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCGGGAAATCAGGTCGGTGGTGtttt                                      <  8:136323/149‑1 (MQ=255)                                                                                                               cTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGGGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCGGGAAATCAGGTCGGTGGTGtttt                                      >  8:315969/1‑149 (MQ=255)                                                                                                               cTGACGACGATCGCGCGGATGAATCAGGGTATGTACAGGCATGCAACTCAGCTTCTCGGGACACAGGAAGATCAGGCGGTATGATGCCGGTGACGCATCGAGAAAGCGGACATCGGGTCTCTGCCGGGAAATCAGGTCGGTGTTGttt                                       >  8:310243/1‑148 (MQ=255)                                                                                                                 gACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCGGGAAATCAGGTCGGTGGTATTTTc                                     >  8:328728/1‑148 (MQ=255)                                                                                                                  aCGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCGGGAAATCAGGTCGGTGGTGTTTTCga                                   <  7:315969/149‑1 (MQ=255)                                                                                                                  aCGCCGCGAGCGCTTATTCAGCAGTGTATGTACAGGCATTAAACGCAGATGCTCGGGCCACAGGCCGAGCAGGCGGTATGCTGCCTGTGAGGCATCGAGAAAGCGGCCATCGTGGCTGTGCCGGGAAATCATGTCGGTGGTGTTTTCga                                   <  7:310243/149‑1 (MQ=255)                                                                                                                    gccgcTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCGGGAAATCAGGTCGGTGGTGTTTTCgatg                                 <  7:341366/149‑1 (MQ=255)                                                                                                                       gcTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCGGGAAATCAGGTCGGTGGTGTTTTCGATGATc                              <  2:3561/149‑1 (MQ=255)                                                                                                                           gcgcgGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCGGGAAATCAGGTCGGTGGTGTTTTCGATGATCAGc                           <  5:235031/148‑1 (MQ=255)                                                                                                                                    cagcagGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCGGGAAATCAGGTCGGTGGTGTTTTCGAAGATCAGCCGATACAGGc                 >  7:304435/1‑149 (MQ=255)                                                                                                                                            tATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCGGGAAATCAGGTCGGTGGTGTTTTCGATGATCAGCCGATACAGGCGTCGGgcg         >  6:13902/1‑149 (MQ=255)                                                                                                                                                tACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTa                                                                                                          <  5:247242/48‑1 (MQ=255)                                                                                                                                                tACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTa                                                                                                          >  6:247242/1‑48 (MQ=255)                                                                                                                                                   aGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCGGGAAATCAGGTCGGTGGTGTTTTCGATGATCAGCCGATACAGGCGTCGGGCGCGGTTgg  >  3:365938/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                    GCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGGTCCAGCGCGGCAGCGGCCTGGCGCAGTACCTGACGCCGCTCGCGCGGATGCAGCAGGGTATGTACAGGCATGCCACGCAGCTGCTCGGGCCACAGGCCGAGCAGGCGGTAGGCTGCCGGTGAGGCATCGAGAAAGCGGCCATCGGGGCTGTGCCGGGAAATCAGGTCGGTGGTGTTTTCGATGATCAGCCGATACAGGCGTCGGGCGCGGTTGG  >  NC_002947/4027819‑4028113

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.