New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4575531	43 (0.660)	8 (0.130)	8/244	NT	17.3%	intergenic (+49/‑73)	glgX/ybhP‑II	glycogen debranching enzyme/phosphohydrolase
	?	NC_002947	= 4575558	37 (0.620)					intergenic (+76/‑46)	glgX/ybhP‑II	glycogen debranching enzyme/phosphohydrolase

CCGGAGTTGCGCAAGGGGCAGCACCTGCAATTCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACT  >  NC_002947/4575384‑4575677                                                                                                                                                      |                                                                                                                                                   ccggAGTTGCGCAAGGGGCAGCACCTGCAATTCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCg                                                                                                                                                   <  2:379751/149‑1 (MQ=255)    gAGTTGCGCAAGGGGCAGCACCTGCAATTCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTg                                                                                                                                                <  5:59614/149‑1 (MQ=255)     aGTTGCGCAAGGGGCAGCACCTGCAATTCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTgg                                                                                                                                               <  1:328890/149‑1 (MQ=255)          cgcAAGGGGCAGCACCTGCAATTCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACg                                                                                                                                          <  2:304243/149‑1 (MQ=255)           gcAAGGGGCAGCACCTGCAATTCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGTTAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACgg                                                                                                                                         >  1:333556/1‑149 (MQ=255)            cAAGGGGCAGCACCTGCAATTCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGgt                                                                                                                                        <  7:56535/149‑1 (MQ=255)               ggggCAGCACCTGCAATTCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTa                                                                                                                                     <  1:370242/149‑1 (MQ=255)                gggCAGCACCTGCAATTCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCtgtgggggccggtaca                                                                                                                                    >  5:190027‑M1/1‑133 (MQ=255)                    agcaCCTGCAATTCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGTTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGc                                                                                                                                >  5:368007/1‑149 (MQ=255)                      caCCTGCAATTCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGccc                                                                                                                              <  8:337594/149‑1 (MQ=255)                        ccTGCAATTCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGcccc                                                                                                                             >  7:31139/1‑148 (MQ=255)                           gCAATTCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCca                                                                                                                           >  5:270532/1‑147 (MQ=255)                              aTTCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAggg                                                                                                                      <  6:317469‑M2/149‑4 (MQ=255)                               ttCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCtgtgggggccggtacaccgttcccaccgggt                                                                                                                     <  3:274260‑M1/149‑32 (MQ=255)                                  gATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAgggttt                                                                                                                   >  1:328470‑M2/1‑142 (MQ=255)                                  gATAGTACGATCGAGGTGAAGGGGCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGACCGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCtgtgggggccggtacaccgttcccaccgggtttg                                                                                                                  <  5:390076‑M1/149‑35 (MQ=255)                                    tAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAgggtttggc                                                                                                                >  7:179984‑M2/1‑140 (MQ=255)                                      gTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCtgtgggggccggtacaccgttcccaccgggtttggcgt                                                                                                              <  6:190027‑M1/149‑39 (MQ=255)                                      gTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAgggtttggcg                                                                                                               >  6:42984‑M2/1‑138 (MQ=255)                                          gTTCGAGGTGACGGGTCGGTGGAGGCTGCTGTTGGTGTTGCAGTACGACGAGGAGTCAACGTTCATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCAAAACCGGGTGGTAACGGTGTACCGGCCCCAACAGGGTTTGGCGGCGAc                                                                                                          <  4:186798/149‑1 (MQ=255)                                          gTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCtgtgggggccggtacaccgttcccaccgggtttggc                                                                                                                >  8:153169‑M1/1‑107 (MQ=255)                                          gTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCtgtgggggccggtacaccgttcccaccgggtttggc                                                                                                                <  7:153169‑M1/143‑37 (MQ=255)                                          gTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGgcggcgc                                                                                                           >  8:96126/1‑147 (MQ=255)                                               aGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGt                                                                                                       >  1:402220/1‑147 (MQ=255)                                                  tGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCC‑AACCCCGTGGGAACCGTGTACCGGCCCCCACAAGGTTTGGCGGCCACAGTGaag                                                                                                   >  7:53661/1‑145 (MQ=255)                                                       ggtcggtcGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGt                                                                                             >  5:118498/1‑149 (MQ=255)                                                            gtcgATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACt                                                                                        >  8:141791/1‑149 (MQ=255)                                                             tcgATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCACGGTTAACtt                                                                                       >  6:157015/1‑149 (MQ=255)                                                               gttgctgcTGATGGTGTTGCATTACGACGAGGAGTTAACGGTGATCGCCCAGGCTGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACTGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTc                                                                                      <  6:118498/146‑1 (MQ=255)                                                                   ctgctgATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGAAGGCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCag                                                                                    >  1:120339/1‑148 (MQ=255)                                                                    tgctgATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCaggag                                                                                 >  1:308720/1‑148 (MQ=255)                                                                      ctgATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCTCCACGCCAAACCCGGTTGCAACGGTGTACCGGACCCCACTGGGTTTGGAGGCGAAAGTGAGGCAGGGGTAAATTCAGGAGGaa                                                                              >  7:289044/1‑149 (MQ=255)                                                                       ttagggTGTTCCTGTTCGACGTGGTTTTAAGGGTTATAGCCCTGGCTGGTCCTAGGTTGTTA‑‑TCCCCACGCC‑AACCCGGTGGGAACGGTGTACCGGCCCCCACTGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATc                                                                            <  8:53661/145‑1 (MQ=255)                                                                             gtttGCAGTTCCACGCGCTGTCACCGGTTATCGCCCCGGCCGGCCGTACGTTGTGC‑‑CCCCCACCCCAAACCGGGTGGCACGGTTGTCCGGGCCCCCACTGGTTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAg                                                                       <  4:153591/147‑1 (MQ=255)                                                                                 gCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTc                                                                   >  5:108954/1‑149 (MQ=255)                                                                                  cAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAgggttt                                                                                                                   <  4:196192‑M2/100‑7 (MQ=255)                                                                                  cAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAgggttt                                                                                                                   >  3:196192‑M2/1‑94 (MQ=255)                                                                                           gaggagTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCtgtgggggccggtacaccgttcccaccggg                                                                                                                      <  5:136853‑M1/88‑31 (MQ=255)                                                                                           gaggagTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCtgtgggggccggtacaccgttcccaccggg                                                                                                                      >  6:136853‑M1/1‑58 (MQ=255)                                                                                           gaggagTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCa                                                         <  5:317469/149‑1 (MQ=255)                                                                                             ggagTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAg                                                        >  3:230803/1‑148 (MQ=255)                                                                                               agTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCGCGCAGGGTTTGGCGGCGACAGTGAGGCAGGGTGAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTaa                                                     >  8:66848/1‑149 (MQ=255)                                                                                                         gATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTAAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGc                                            >  7:111003/1‑148 (MQ=255)                                                                                                          aTAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACCGTGTACCGGCCACCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGc                                            >  7:38007/1‑147 (MQ=255)                                                                                                               ccAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGt                                      >  6:129300/1‑148 (MQ=255)                                                                                                                    caggTCCTAGGTTGTTA‑‑TCGCCCCGCCAAACCCGGTGGTAAGGGTTTACGGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCa                                <  8:31139/149‑1 (MQ=255)                                                                                                                          cTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGcccc                          >  3:30601/1‑149 (MQ=255)                                                                                                                          cTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGcccc                          >  7:241184/1‑149 (MQ=255)                                                                                                                           tACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGCCAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCg                         >  2:376320/1‑149 (MQ=255)                                                                                                                           tACGTTGTGA‑‑TCGCCACGCCAAACACGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCg                         >  2:381825/1‑149 (MQ=255)                                                                                                                              gTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGcc                      >  6:102978/1‑149 (MQ=255)                                                                                                                                tgtgA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGt                    >  1:372681/1‑149 (MQ=255)                                                                                                                                         cccacgccaACCCGGGGGGGAACGGTGTACCGCCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGc             <  4:30601/148‑1 (MQ=255)                                                                                                                                            acgccaAACCCGGTGGGAACGGTGTACCGGCCCCCACAgggtttggcgtggcgatcacaacgtaggacctgcctgggctatcaccgttcactcctcgtcgtactgcaacaccatcagcagcatcgaccgacccttcacctcgaacgtac          <  6:190027‑M2/149‑112 (MQ=255)                                                                                                                                            acgccaAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTg          >  7:66707/1‑149 (MQ=255)                                                                                                                                             cgccaAAGCGGGTGGTAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGc         <  8:66707/149‑1 (MQ=255)                                                                                                                                             cgccaAACCCtgtgggggccggtacaccgttcccaccgggtttggcgtggcgatcacaacgtaggacctgcctgggctatcaccgttcactcctcgtcgtactgcaacaccatcagcagcatcgaccgacccttcacctcgaacgtac          >  6:42984‑M1/1‑10 (MQ=255)                                                                                                                                              gccaAACCCtgtgggggccggtacaccgttcccaccgggtttggcgtggcgatcacaacgtaggacctgcctgggctatcaccgttcactcctcgtcgtactgcaacaccatcagcagcatcgaccgacccttcacctcgaacgtacta        >  7:179984‑M1/1‑9 (MQ=255)                                                                                                                                              gccaAACCCGGTGGGAACGGTGTACCGGCCCCCACAgggtttggcgtggcgatcacaacgtaggacctgcctgggctatcaccgttcactcctcgtcgtactgcaacaccatcagcagcatcgaccgacccttcacctcgaac              >  8:153169‑M2/1‑36 (MQ=255)                                                                                                                                              gccaAACCCGGTGGGAACGGTGTACCGGCCCCCACAgggtttggcgtggcgatcacaacgtaggacctgcctgggctatcaccgttcactcctcgtcgtactgcaacaccatcagcagcatcgaccgacccttcacctcgaac              <  7:153169‑M2/143‑108 (MQ=255)                                                                                                                                               ccaACCCCGGGGGTAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCgg       <  1:244891/149‑1 (MQ=255)                                                                                                                                               ccaAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCgg       >  5:46853/1‑149 (MQ=255)                                                                                                                                               ccaAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCgg       <  5:102978/149‑1 (MQ=255)                                                                                                                                                caAACCCGGTGGGAACGGTGTACCGGCCCCCACAgggtttggcgtggcgatcacaacgtaggacctgcctgggctatcaccggtcactcctcgtcgtactgcaacaccatcagcagcatcgaccgccccttcacctcgatcgtactatc      <  5:390076‑M2/149‑116 (MQ=255)                                                                                                                                                caAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGc                                                          <  6:182479/97‑1 (MQ=255)                                                                                                                                                caAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGc                                                          >  5:182479/1‑97 (MQ=255)                                                                                                                                                 aaaCCCtgtgggggccggtacaccgttcccaccgggtttggcgtggcgatcacaacgtaggacctgcctgggctatcaccgttcactcctcgtcgtactgcaacaccatcagcagcatcgaccgacccttcacctcgaacgtactatc      >  1:328470‑M1/1‑6 (MQ=255)                                                                                                                                                 aaaCCCtgtgggggccggtacaccgttcccaccgggtttggcgtggcgatcacaacgtaggacctgcctgggctatcaccgttcactcctcgtcgtactg                                                      <  4:196192‑M1/100‑95 (MQ=255)                                                                                                                                                 aaaCCCtgtgggggccggtacaccgttcccaccgggtttggcgtggcgatcacaacgtaggacctgcctgggctatcaccgttcactcctcgtcgtactg                                                      >  3:196192‑M1/1‑6 (MQ=255)                                                                                                                                                   aCCCGGTGGGAACGGTGTACCGGCCCCCACAgggtttggcgtggcgatcacaacgtaggacctgcctgggctatcaccgttcactcctcgtcgtactgcaacaccatcagcagcatcgaccgacccttcacctcgaacgtactatcgaa   <  3:274260‑M2/149‑119 (MQ=255)                                                                                                                                                    ccctgtgggggccggtacaccgttcccaccgggtttggcgtggcgatcacaacgtaggacctgcctgggctatcaccgttcactcctcgtcgtactgcaacaccatcagcagcatcgaccgacccttcacctcgaacgtactatcgaat  <  6:317469‑M1/149‑147 (MQ=255)                                                                                                                                                    cccGGTGGGAACGGTGTACCGGCCCCCACAgggtttggcgtggcgatcacaacgtaggacctgcctgggctatcaccgttcactcctc                                                               >  6:136853‑M2/1‑30 (MQ=255)                                                                                                                                                    cccGGTGGGAACGGTGTACCGGCCCCCACAgggtttggcgtggcgatcacaacgtaggacctgcctgggctatcaccgttcactcctc                                                               <  5:136853‑M2/88‑59 (MQ=255)                                                                                                                                                      |                                                                                                                                                   CCGGAGTTGCGCAAGGGGCAGCACCTGCAATTCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGA‑‑TCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACT  >  NC_002947/4575384‑4575677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.