| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4611681 | 73 (1.120) | 4 (0.060) | 4/250 | NT | 5.7% | intergenic (+643/‑1464) | hcpC‑II/PP_4084 | hemolysin‑coregulated protein/hypothetical protein |
| ? | NC_002947 | = 4611701 | 63 (1.020) | intergenic (+663/‑1444) | hcpC‑II/PP_4084 | hemolysin‑coregulated protein/hypothetical protein | |||||
GCGCGAATTCTGCGTTCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCG > NC_002947/4611538‑4611827 | gcgcGAATTCTGCGTTCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTtgatg > 2:393375‑M1/1‑144 (MQ=255)gcgcGAATTCTGCGTTCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGAt > 4:168782/1‑147 (MQ=32) cgcgAATTCTGCGTTCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCa < 2:406143/148‑1 (MQ=32) gcgAATTCTGCGTTCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGc > 7:80498/1‑149 (MQ=32) ttCTGCGTTCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATgg > 6:254063/1‑149 (MQ=32) cTGCGTTCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGgc < 5:278655/148‑1 (MQ=32) cTGCGTTCAGGCCGGTGAGACGGACTTGGCGTTCATCGACCGCCTGGCCGCTGAATAAGGCTGCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTTATCAGCCATGgc < 5:356023/148‑1 (MQ=255) tGCGTTCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGAACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGgcgc > 8:11345/1‑149 (MQ=17) cGTTCAGGCCGGTTAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCa < 5:386454/149‑1 (MQ=17) gTTCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCAt > 2:132901/1‑149 (MQ=32) ttaaGGCCGGTGAGACTTTCTTGGAGTTCTTCGCAAGCCTGTCCTCTGAAGAAGTCTTCGTCTACGGCTTTGCTCACAGTGAAAAGCTGCACAATCTGATCATCACCGATCGGCTGCAGTCCCTCGGCATGATCAGCAATGgggcattc < 2:134420/146‑5 (MQ=11) ttCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCAt > 7:291867/1‑148 (MQ=32) ttCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATc < 8:8013/149‑1 (MQ=32) tCAGGTCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATc > 5:209196/1‑148 (MQ=17) aGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGGCGCTGAAGTAGGCTTCCTGTAGCGCTTTGCGCACAGTGAAAAGCTGCAGAAGCTGATCATGACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCGATGGCGCCATCAa > 4:156791‑M2/1‑147 (MQ=255) aGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAa > 4:162732‑M2/1‑147 (MQ=255) gCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAaggc < 4:199562‑M2/149‑5 (MQ=255) gTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCcgac < 7:11345/149‑1 (MQ=32) tGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTtgatggcgccatggctgatcaggccgagg < 8:302018‑M1/149‑30 (MQ=255) ggACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTtgatggcgccatggctgatcaggccgaggg < 6:190692‑M1/144‑31 (MQ=255) ggACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTtgatggcgccatggctgatcaggccgaggg > 5:190692‑M1/1‑114 (MQ=255) ggACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATg > 8:192757/1‑146 (MQ=34) ggACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGaa < 7:192757/148‑1 (MQ=34) gACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTtgatggcgccatggctgatcaggccgagggactgca < 1:393375‑M1/149‑37 (MQ=255) gACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGa < 7:110795/149‑1 (MQ=34) cTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGAc > 8:21426/1‑148 (MQ=34) ttGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGa < 7:21426/149‑1 (MQ=34) ggCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAg < 2:130634/148‑1 (MQ=34) cATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCt > 2:144238/1‑149 (MQ=38) aTCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTg > 2:11449/1‑149 (MQ=38) aTCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTg < 3:178566/149‑1 (MQ=38) cgcccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGc > 5:189115/1‑148 (MQ=39) gcccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCg < 2:59507/148‑1 (MQ=39) gcccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGa > 2:365306/1‑149 (MQ=39) cccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAaggc < 3:385433‑M2/121‑5 (MQ=255) cccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAaggc > 4:385433‑M2/1‑117 (MQ=255) cccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGAt > 1:51221/1‑149 (MQ=39) cccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGAt > 6:107996/1‑149 (MQ=39) ccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGAt > 4:323482/1‑148 (MQ=39) cgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATga < 1:365306/149‑1 (MQ=39) gCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAATCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGacgacg < 1:144238/148‑1 (MQ=37) cGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGc > 7:55063/1‑149 (MQ=37) cGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGc > 3:349131/1‑149 (MQ=37) cTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGGCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCg < 4:98101/149‑1 (MQ=38) gaagaaGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCgg > 4:98991/1‑148 (MQ=38) agaagGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAg < 2:400609/149‑1 (MQ=39) gaagGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAgg > 3:55070/1‑149 (MQ=39) gCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAa > 4:324498‑M2/1‑96 (MQ=255) gCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAa < 3:324498‑M2/97‑2 (MQ=255) gCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCt < 1:132901/149‑1 (MQ=39) ttCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGATGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCt > 7:258602/1‑147 (MQ=255) tCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGc < 3:199562/149‑1 (MQ=255) cTACCGCGTTGCGCACACTGAAAAGCTGCACAAGCTGATCATCACCGCTCGGCTGCAGTCCCGCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGTATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGc < 1:100682/149‑1 (MQ=14) cTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGt < 5:257431/149‑1 (MQ=255) gcgcACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTAcc < 6:209196/148‑1 (MQ=255) cgcACAGTGAAAAGCTGCGCAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCaa < 4:387131/149‑1 (MQ=255) cgcACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCaa < 8:291867/149‑1 (MQ=255) cacaGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGc < 4:349131/149‑1 (MQ=255) gAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAg > 4:13758/1‑149 (MQ=255) aGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGt > 1:66706/1‑149 (MQ=255) gCTGCACACGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCATGTCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTg < 4:227821/149‑1 (MQ=255) cTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTgg < 8:80498/149‑1 (MQ=255) cacaAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGc < 5:254063/147‑1 (MQ=255) cacaAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGc < 4:189466/147‑1 (MQ=255) cacaAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGc < 3:98991/147‑1 (MQ=255) cacaAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCg < 2:66706/148‑1 (MQ=255) aaGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTg < 7:95565/142‑1 (MQ=255) aaGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGAACCAAGCCAACAGCGGTg > 8:95565/1‑142 (MQ=255) gATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCa > 4:99462/1‑149 (MQ=255) ccGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGc > 1:85765/1‑149 (MQ=255) cGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTga > 7:195353/1‑95 (MQ=255) cGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTga < 8:195353/95‑1 (MQ=255) ggCTGCAGTCCCTCGGCCTGATCTGCCATGGCGCCATCAAGGCCGAGG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTcgc < 2:330458/149‑1 (MQ=255) gCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTcgcc < 6:189115/149‑1 (MQ=255) tGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcgggcgatgaacgccaagtc < 1:393375‑M2/149‑114 (MQ=255) gCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCt < 3:323482/149‑1 (MQ=255) cAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTcgccgc < 3:68255/147‑1 (MQ=255) cAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCtt < 6:209341/149‑1 (MQ=255) cAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCtt > 5:209341/1‑149 (MQ=255) gTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTgc > 1:226652/1‑149 (MQ=255) tCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTgcg > 4:212366/1‑149 (MQ=255) cccTCGGCCTGATCAGCCATGGCGCCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcgggcgatgaacgccaagtcc < 6:190692‑M2/144‑115 (MQ=255) cccTCGGCCTGATCAGCCATGGCGCCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcgggcgatgaacgccaagtcc > 5:190692‑M2/1‑30 (MQ=255) ccTCGGCCTGATCAGCCATGGCGCCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcgggcgatgaacgccaagtccgtctca < 8:302018‑M2/149‑121 (MQ=255) ccTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGCTCAAGCCATACCCTGCCTTCGCCGCTTgcgc > 1:94139/1‑148 (MQ=255) ccTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTgcgc > 7:293458/1‑148 (MQ=255) ccTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTgcgc < 2:51221/148‑1 (MQ=255) ccTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTgcgc > 3:37687/1‑148 (MQ=255) cTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTa < 3:168782/149‑1 (MQ=255) tCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTgcgc < 2:243707/146‑1 (MQ=255) tCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTgcgc > 1:243707/1‑146 (MQ=255) gCCTtgatggcgccatggctgatcaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcgggcgatgaacgccaagtccgtctcaccggc < 4:199562‑M1/149‑146 (MQ=255) gCCTtgatggcgccatggctgatcaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcggg < 3:385433‑M1/121‑118 (MQ=255) gCCTtgatggcgccatggctgatcaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcggg > 4:385433‑M1/1‑4 (MQ=255) cTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATCAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACAcc > 8:349087/1‑147 (MQ=255) ttgatggcgccatggctgatcaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcgggcgatgaacgccaagtccgtctcaccggcct > 4:162732‑M1/1‑1 (MQ=255) ttgatggcgccatggctgatcaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagc > 4:324498‑M1/1‑1 (MQ=255) ttgatggcgccatggctgatcaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagc < 3:324498‑M1/97‑97 (MQ=255) ttgatggcgccatcgctgatcaggccgagggactgcagccgatcggtcatgatcagcttctgcagcttttcactgtgcgcaaagcgctacaggaagcctacttcagcgcccaggcgggcgatgaacgccaagtccgtctcaccggcct > 4:156791‑M1/1‑1 (MQ=255) | GCGCGAATTCTGCGTTCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCG > NC_002947/4611538‑4611827 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |