New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4611681	73 (1.120)	4 (0.060)	4/250	NT	5.7%	intergenic (+643/‑1464)	hcpC‑II/PP_4084	hemolysin‑coregulated protein/hypothetical protein
	?	NC_002947	= 4611701	63 (1.020)					intergenic (+663/‑1444)	hcpC‑II/PP_4084	hemolysin‑coregulated protein/hypothetical protein

AGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAGCAGGTGCGCACCGCTCGTC  >  NC_002947/4611555‑4611848                                                                                                                                                   |                                                                                                                                                     aGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGGCGCTGAAGTAGGCTTCCTGTAGCGCTTTGCGCACAGTGAAAAGCTGCAGAAGCTGATCATGACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCGATGGCGCCATCAa                                                                                                                                                     >  4:156791‑M2/1‑147 (MQ=255) aGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAa                                                                                                                                                     >  4:162732‑M2/1‑147 (MQ=255)   gCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAaggc                                                                                                                                                  <  4:199562‑M2/149‑5 (MQ=255)       gTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCcgac                                                                                                                                              <  7:11345/149‑1 (MQ=32)              ggACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATg                                                                                                                                         >  8:192757/1‑146 (MQ=34)              ggACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGaa                                                                                                                                       <  7:192757/148‑1 (MQ=34)               gACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGa                                                                                                                                     <  7:110795/149‑1 (MQ=34)                 cTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGAc                                                                                                                                    >  8:21426/1‑148 (MQ=34)                  ttGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGa                                                                                                                                  <  7:21426/149‑1 (MQ=34)                    ggCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAg                                                                                                                                 <  2:130634/148‑1 (MQ=34)                          cATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCt                                                                                                                          >  2:144238/1‑149 (MQ=38)                           aTCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTg                                                                                                                         <  3:178566/149‑1 (MQ=38)                           aTCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTg                                                                                                                         >  2:11449/1‑149 (MQ=38)                             cgcccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGc                                                                                                                        >  5:189115/1‑148 (MQ=39)                              gcccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCg                                                                                                                       <  2:59507/148‑1 (MQ=39)                              gcccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGa                                                                                                                      >  2:365306/1‑149 (MQ=39)                               cccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAaggc                                                                                                                                                  >  4:385433‑M2/1‑117 (MQ=255)                               cccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAaggc                                                                                                                                                  <  3:385433‑M2/121‑5 (MQ=255)                               cccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGAt                                                                                                                     >  1:51221/1‑149 (MQ=39)                               cccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGAt                                                                                                                     >  6:107996/1‑149 (MQ=39)                                ccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGAt                                                                                                                     >  4:323482/1‑148 (MQ=39)                                 cgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATga                                                                                                                   <  1:365306/149‑1 (MQ=39)                                       gCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAATCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGacgacg                                                                                                              <  1:144238/148‑1 (MQ=37)                                         cGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGc                                                                                                           >  7:55063/1‑149 (MQ=37)                                         cGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGc                                                                                                           >  3:349131/1‑149 (MQ=37)                                           cTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGGCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCg                                                                                                         <  4:98101/149‑1 (MQ=38)                                             gaagaaGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCgg                                                                                                        >  4:98991/1‑148 (MQ=38)                                               agaagGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAg                                                                                                     <  2:400609/149‑1 (MQ=39)                                                gaagGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAgg                                                                                                    >  3:55070/1‑149 (MQ=39)                                                    gCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAa                                                                                                                                                     <  3:324498‑M2/97‑2 (MQ=255)                                                    gCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAa                                                                                                                                                     >  4:324498‑M2/1‑96 (MQ=255)                                                    gCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCt                                                                                                <  1:132901/149‑1 (MQ=39)                                                      ttCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGATGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCt                                                                                                >  7:258602/1‑147 (MQ=255)                                                          tCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGc                                                                                          <  3:199562/149‑1 (MQ=255)                                                           cTACCGCGTTGCGCACACTGAAAAGCTGCACAAGCTGATCATCACCGCTCGGCTGCAGTCCCGCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGTATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGc                                                                                          <  1:100682/149‑1 (MQ=14)                                                                 cTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGt                                                                                   <  5:257431/149‑1 (MQ=255)                                                                     gcgcACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTAcc                                                                                <  6:209196/148‑1 (MQ=255)                                                                      cgcACAGTGAAAAGCTGCGCAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCaa                                                                              <  4:387131/149‑1 (MQ=255)                                                                      cgcACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCaa                                                                              <  8:291867/149‑1 (MQ=255)                                                                        cacaGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGc                                                                            <  4:349131/149‑1 (MQ=255)                                                                              gAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAg                                                                      >  4:13758/1‑149 (MQ=255)                                                                                  aGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGt                                                                  >  1:66706/1‑149 (MQ=255)                                                                                   gCTGCACACGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCATGTCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTg                                                                 <  4:227821/149‑1 (MQ=255)                                                                                    cTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTgg                                                                <  8:80498/149‑1 (MQ=255)                                                                                       cacaAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGc                                                               <  5:254063/147‑1 (MQ=255)                                                                                       cacaAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGc                                                               <  4:189466/147‑1 (MQ=255)                                                                                       cacaAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGc                                                               <  3:98991/147‑1 (MQ=255)                                                                                       cacaAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCg                                                              <  2:66706/148‑1 (MQ=255)                                                                                          aaGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTg                                                                 <  7:95565/142‑1 (MQ=255)                                                                                          aaGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGAACCAAGCCAACAGCGGTg                                                                 >  8:95565/1‑142 (MQ=255)                                                                                               gATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCa                                                     >  4:99462/1‑149 (MQ=255)                                                                                                       ccGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGc                                             >  1:85765/1‑149 (MQ=255)                                                                                                            cGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTga                                                                                              <  8:195353/95‑1 (MQ=255)                                                                                                            cGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTga                                                                                              >  7:195353/1‑95 (MQ=255)                                                                                                             ggCTGCAGTCCCTCGGCCTGATCTGCCATGGCGCCATCAAGGCCGAGG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTcgc                                       <  2:330458/149‑1 (MQ=255)                                                                                                              gCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTcgcc                                      <  6:189115/149‑1 (MQ=255)                                                                                                                tGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcgggcgatgaacgccaagtc                                     <  1:393375‑M2/149‑114 (MQ=255)                                                                                                                 gCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCt                                   <  3:323482/149‑1 (MQ=255)                                                                                                                  cAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTcgccgc                                    <  3:68255/147‑1 (MQ=255)                                                                                                                  cAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCtt                                  <  6:209341/149‑1 (MQ=255)                                                                                                                  cAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCtt                                  >  5:209341/1‑149 (MQ=255)                                                                                                                    gTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTgc                                >  1:226652/1‑149 (MQ=255)                                                                                                                     tCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTgcg                               >  4:212366/1‑149 (MQ=255)                                                                                                                      cccTCGGCCTGATCAGCCATGGCGCCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcgggcgatgaacgccaagtcc                                    >  5:190692‑M2/1‑30 (MQ=255)                                                                                                                      cccTCGGCCTGATCAGCCATGGCGCCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcgggcgatgaacgccaagtcc                                    <  6:190692‑M2/144‑115 (MQ=255)                                                                                                                       ccTCGGCCTGATCAGCCATGGCGCCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcgggcgatgaacgccaagtccgtctca                              <  8:302018‑M2/149‑121 (MQ=255)                                                                                                                       ccTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGCTCAAGCCATACCCTGCCTTCGCCGCTTgcgc                              >  1:94139/1‑148 (MQ=255)                                                                                                                       ccTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTgcgc                              >  7:293458/1‑148 (MQ=255)                                                                                                                       ccTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTgcgc                              <  2:51221/148‑1 (MQ=255)                                                                                                                       ccTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTgcgc                              >  3:37687/1‑148 (MQ=255)                                                                                                                        cTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTa                            <  3:168782/149‑1 (MQ=255)                                                                                                                         tCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTgcgc                              <  2:243707/146‑1 (MQ=255)                                                                                                                         tCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTgcgc                              >  1:243707/1‑146 (MQ=255)                                                                                                                              cTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATCAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACAcc                        >  8:349087/1‑147 (MQ=255)                                                                                                                                 aTCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAg                     <  2:85765/147‑1 (MQ=255)                                                                                                                                     gCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAGCAGGTg               >  2:168928/1‑149 (MQ=255)                                                                                                                                               cATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcgggcgatgaacgccaagtccgtctcaccggcctgaacgcagaattcgcgc      >  2:393375‑M2/1‑5 (MQ=255)                                                                                                                                                   aaGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAGCAGGTGCGCACCGCTCGTc  <  3:13758/148‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     AGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACG‑ATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAGCAGGTGCGCACCGCTCGTC  >  NC_002947/4611555‑4611848

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.