New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4700136	61 (0.940)	4 (0.070)	3/244	NT	6.2%	coding (552/2655 nt)	kdpD	sensor protein
	?	NC_002947	= 4700167	64 (1.060)					coding (521/2655 nt)	kdpD	sensor protein

CGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCTTTCCAGGTGCTGGACGTTGACCGTGGTGTAC  >  NC_002947/4699988‑4700283                                                                                                                                                     |                                                                                                                                                      cGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGC                                                                                                                                                       <  6:301020‑M1/149‑1 (MQ=255)     ggCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGct                                                                                                                                                   <  3:146489/149‑1 (MQ=255)      gCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCtggtg                                                                                                                                                  >  2:195411‑M1/1‑144 (MQ=255)         aGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTcg                                                                                                                                               <  6:13774/149‑1 (MQ=255)           gTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTcgcg                                                                                                                                             <  2:2652/149‑1 (MQ=255)             cGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGa                                                                                                                                           <  8:347181/149‑1 (MQ=255)                    gACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGt                                                                                                                                  <  3:129351/149‑1 (MQ=255)                          agcagcGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCa                                                                                                                            <  4:193169/149‑1 (MQ=255)                           gcagcGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAg                                                                                                                           <  3:152072/149‑1 (MQ=255)                                  cGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAgc                                                                                                                    >  5:44755‑M2/1‑147 (MQ=255)                                    gTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAgctc                                                                                                                  <  1:201882‑M2/149‑5 (MQ=255)                                        gCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAgctcgaac                                                                                                              >  7:35692‑M2/1‑141 (MQ=255)                                         cATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCtggtgctgatcgacctgcctccgcgagagctgctcgaacg                                                                                                               <  1:195411‑M1/149‑41 (MQ=255)                                         cATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCtggtgctgatcgacctgcctccgcgagagctgctcgaac                                                                                                                <  3:303483‑M1/148‑40 (MQ=255)                                         cATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAgctcgaac                                                                                                              >  7:147920‑M2/1‑140 (MQ=255)                                           tGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCt                                                                                                           >  5:261336/1‑149 (MQ=255)                                              ccAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTcc                                                                                                        >  3:124003/1‑149 (MQ=255)                                              ccAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATAGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTcc                                                                                                        <  2:298611/149‑1 (MQ=255)                                                aGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTg                                                                                                      >  6:90106/1‑149 (MQ=255)                                                 gCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTg                                                                                                      >  6:277867/1‑148 (MQ=255)                                                  cTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTgc                                                                                                     >  6:170882/1‑148 (MQ=255)                                                     gcgcAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTgcag                                                                                                   <  2:201882/147‑1 (MQ=255)                                                     gcgcAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGGCGATCAGCACCAGCTCGCACGCTTCCTgcagca                                                                                                 >  5:242217/1‑149 (MQ=255)                                                           ggCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGt                                                                                           >  1:26857/1‑149 (MQ=255)                                                           ggCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGt                                                                                           >  2:84716/1‑149 (MQ=255)                                                              ggTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCg                                                                                        <  3:6453/149‑1 (MQ=255)                                                               gTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCgg                                                                                       <  1:84716/149‑1 (MQ=255)                                                                        gttTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCtggtgctgatcgacctgcctccgcgagagctgctcaaac                                                                                                                >  7:269596‑M1/1‑78 (MQ=255)                                                                        gttTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCtggtgctgatcgacctgcctccgcgagagctgctcaaac                                                                                                                <  8:269596‑M1/117‑40 (MQ=255)                                                                          ttgcctaaaaTAAGCATCGCAGGCCCGCCTTTGCTGGTCCGGGACGTTCACCTTGCCTTGCAGGATGCGTTGGACGATGTCTCGGGGACGCCCAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGtctc                                                                              <  1:315494/143‑1 (MQ=255)                                                                          ttGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTcgc                                                                            >  3:221249/1‑149 (MQ=255)                                                                           tGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTcgc                                                                            <  5:336458/148‑1 (MQ=255)                                                                            gCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTcgcg                                                                           >  1:299551/1‑148 (MQ=255)                                                                               aaaaaTACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACt                                                                       >  4:198192/1‑149 (MQ=255)                                                                                aaaaTACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACtt                                                                      <  5:90106/149‑1 (MQ=255)                                                                                     aCGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTcg                                                                             <  5:205961/137‑1 (MQ=255)                                                                                     aCGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTcg                                                                             >  6:205961/1‑137 (MQ=255)                                                                                     aCGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTgacag                                                                 >  7:101135/1‑145 (MQ=255)                                                                                       gCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGcc                                                               >  6:249794/1‑149 (MQ=255)                                                                                        cATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCg                                                              >  7:314656/1‑149 (MQ=255)                                                                                         aTCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCgg                                                             >  8:215406/1‑149 (MQ=255)                                                                                            gATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCCTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTaa                                                          <  7:215406/149‑1 (MQ=255)                                                                                               ggCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGAAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGt                                                       >  6:296292/1‑149 (MQ=255)                                                                                                 ccgccCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTcg                                                     <  5:277867/149‑1 (MQ=255)                                                                                                    cccTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCgg                                                  >  8:47776/1‑149 (MQ=255)                                                                                                     ccTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGa                                                 <  8:39653/149‑1 (MQ=255)                                                                                                            tGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAgctcgaac                                                                                                              >  3:246875‑M2/1‑73 (MQ=255)                                                                                                            tGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAgctcgaac                                                                                                              <  4:246875‑M2/81‑9 (MQ=255)                                                                                                            tGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTc                                          >  5:142727/1‑149 (MQ=255)                                                                                                            tGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTc                                          >  7:66974/1‑149 (MQ=255)                                                                                                              cTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCg                                         <  6:261336/148‑1 (MQ=255)                                                                                                               tCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGtt                                       >  8:118986/1‑149 (MQ=255)                                                                                                                 gggCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGa                                     <  8:314656/149‑1 (MQ=255)                                                                                                                  ggCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAg                                    <  2:299551/149‑1 (MQ=255)                                                                                                                         acacCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCtt                                >  7:284087/1‑146 (MQ=255)                                                                                                                         acacCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCtt                                <  8:284087/146‑1 (MQ=255)                                                                                                                           acCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCTTTCCAg                           <  8:66974/149‑1 (MQ=255)                                                                                                                             cTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCTTTCCAGGt                         >  2:383495/1‑149 (MQ=255)                                                                                                                             cTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCTTTCCAGGt                         <  3:198192/149‑1 (MQ=255)                                                                                                                             cTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCTTTCCAGGt                         >  3:27185/1‑149 (MQ=255)                                                                                                                              ttGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCTTTCCAGGTg                        >  1:399020/1‑149 (MQ=255)                                                                                                                                 ccTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCTTTCCAGGTGCt                      <  4:124003/148‑1 (MQ=255)                                                                                                                                  cTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCCGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTTTCGTTGAGGGTTTCCAGGTGATg                     >  6:331731/1‑148 (MQ=255)                                                                                                                                  cTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCTTTCCAGGTGCTg                     >  3:122130/1‑148 (MQ=255)                                                                                                                                      aCGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCg                                                              <  4:290116/103‑1 (MQ=255)                                                                                                                                      aCGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCg                                                              >  3:290116/1‑103 (MQ=255)                                                                                                                                       cGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCTTTCCAGGTGCTGGACGtt               <  5:249794/149‑1 (MQ=255)                                                                                                                                        gCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGtt                                       <  8:299205/124‑1 (MQ=255)                                                                                                                                        gCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGtt                                       >  7:299205/1‑124 (MQ=255)                                                                                                                                        gCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGAGCACTTCAACGCCGGTAATGTCGAGGACCATGTCGTTGAGGCTTTCCAGGTGATCGACGtt               >  4:297166/1‑148 (MQ=255)                                                                                                                                           ggCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCTTTCCAGGTGCTGGACGTTGAcc           <  4:122130/149‑1 (MQ=255)                                                                                                                                             cGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAgctcgaacgcctgcgtgaaggcaaggtgtacgtgcccgagcaggcaagggcggccatcgatgcgtatttttcgcaaaccaacctcaccgccctgcgcgagctggccatg         <  1:195411‑M2/149‑110 (MQ=255)                                                                                                                                              gTTTGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAgctcgaacgcctgcgtgaaggcaaggtgtacgtgcccgagcaggcaagggcggccatcgatgcgtatttttcgcaaac                                        >  7:269596‑M2/1‑39 (MQ=255)                                                                                                                                              gTTTGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAgctcgaacgcctgcgtgaaggcaaggtgtacgtgcccgagcaggcaagggcggccatcgatgcgtatttttcgcaaac                                        <  8:269596‑M2/117‑79 (MQ=255)                                                                                                                                              gTTCGAGGAGCTCTCGCGGAGG‑‑CTGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCTTTCCAGGTGCTGGACGTTGACCgtg        <  3:297166/149‑1 (MQ=255)                                                                                                                                              gTTCGAGCtggtgctgatcgacctgcctccgcgagagctgctcgaacgcctgcgtgaaggcaaggtgtacgtgcccgagcaggcaagggcggccatcgatgcgtatttttcgcaaaccaacctcaccgccctgcgcgagctggccatgc          >  7:35692‑M1/1‑8 (MQ=255)                                                                                                                                              gTTCGAGCtggtgctgatcgacctgcctccgcgagagctgctcgaacgcctgcgtgaaggcaaggtgtacgtgcccgagcaggcaagggcggccatcgatgcgtatttttcgcaaaccaacctcaccgccctgcgcgagctggccatg           >  7:147920‑M1/1‑8 (MQ=255)                                                                                                                                              gTTCGAGCtggtgctgatcgacctgcctccgcgagagctgctcgaacgcctgcgtgaaggcaaggtgtacgtgcccgagca                                                                              >  3:246875‑M1/1‑8 (MQ=255)                                                                                                                                              gTTCGAGCtggtgctgatcgacctgcctccgcgagagctgctcgaacgcctgcgtgaaggcaaggtgtacgtgcccgagca                                                                              <  4:246875‑M1/81‑74 (MQ=255)                                                                                                                                              gTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAgctcgaacgcctgcgtgaaggcaaggtgtacgtgcccgagcaggcaagggcggccatcgatgcgtatttttcgcaaaccaacctcaccgccctgcgcgagctggccatg         <  3:303483‑M2/148‑110 (MQ=255)                                                                                                                                              gTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCTTTCCAGGTGCTGGACGTTGACCgtg        <  7:363489/149‑1 (MQ=255)                                                                                                                                              gTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCTTTCCAGGTGCTGGACGTTGACCgtg        <  7:118986/149‑1 (MQ=255)                                                                                                                                                 cGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCTTTCCAGGTGCTGGACGTTGACCgtggt      <  2:343571/148‑1 (MQ=255)                                                                                                                                                  gAGCtggtgctgatcgacctgcctccgcgagagctgctcgaacgcctgcgtgaaggcaaggtgtacgtgcccgagcaggcaagggcggccatcgatgcgtatttttcgcaaaccaacctcaccgccctgcgcgagctggccatgcagac      <  1:201882‑M1/149‑146 (MQ=255)                                                                                                                                                  gAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCTTTCCAGGTGCTGGACGTTGACCgtggtg     <  4:221249/148‑1 (MQ=255)                                                                                                                                                  gAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCTTTCCAGGTGCTGGACGTTGACCgtggtg     <  5:170882/148‑1 (MQ=255)                                                                                                                                                    gcagcTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCTTTCCAGGTGCTGGACGTTGACCGTGGTGTac  <  2:26857/149‑1 (MQ=255)                                                                                                                                                    gCtggtgctgatcgacctgcctccgcgagagctgctcgaacgcctgcgtgaaggcaaggtgtacgtgcccgagcaggcaagggcggccatcgatgcgtatttttcgcaaaccaacctcaccgccctgcgcgagctggccatgcagaccg    >  5:44755‑M1/1‑2 (MQ=255)                                                                                                                                                     |                                                                                                                                                      CGTGGGCCAGGTCGGCATCGACCTGAGCAGCGGCGGTCTGCATGGCCAGCTCGCGCAGGGCGGTGAGGTTGGTTTGCGAAAAATACGCATCGATGGCCGCCCTTGCCTGCTCGGGCACGTACACCTTGCCTTCACGCAGGCGTTCGAGCAGCTCTCGCGGAGG‑‑CAGGTCGATCAGCACCAGCTCGAACGCTTCCTGCAGCACCCAGTCCGGCAGGGTCTCGCGCACTTGCACGCCGGTAATGTCGCGGACCTTGTCGTTGAGGCTTTCCAGGTGCTGGACGTTGACCGTGGTGTAC  >  NC_002947/4699988‑4700283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.