New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4979191 =	57 (0.880)	3 (0.050)	3/248	NT	5.2%	coding (231/786 nt)	flgG	flagellar basal‑body rod protein FlgG
	?	NC_002947	4979266 =	56 (0.920)					coding (156/786 nt)	flgG	flagellar basal‑body rod protein FlgG

GCCGTCGGAGTTCAGGTGGAAGGTACCGTCACGGGTATACGACACGGTGCCGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGAC  >  NC_002947/4979044‑4979337                                                                                                                                                    |                                                                                                                                                   gCCGTCGGAGTTCAGGTGGAAGGTACCGTCACGGGTATACGACACGGTGCCGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTgg                                                                                                                                                    <  1:369170/148‑1 (MQ=255) gCCGTCGGAGTTCAGGTGGAAGGTACCGTCACGGGTATACGACACGGTGCCGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTgg                                                                                                                                                    <  3:346821/148‑1 (MQ=255)  ctctttgggtcgctaaaaccggcctgtccgctcaggacaccaacctgacggtcatttccaacaacctggccaacgtctcgaccaccggcttcaagcgtgatcgcgccgaattcgcagacctgctctaccagatcaagcgccagcctGGt                                                                                                                                                  >  1:163174‑M1/147‑149 (MQ=255)  ccGTCGGAGTTCAGGTGGAAGGTACCGTCACGGGTATACGACACGGTGCCGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGt                                                                                                                                                  <  2:19997/149‑1 (MQ=255)   cGTCGGAGTTCAGGTGGAAGGTACCGTCACGGGTATACGACACGGTGCCGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTg                                                                                                                                                 >  4:198421/1‑149 (MQ=255)     tttgggtcgctaaaaccggcctgtccgctcaggacaccaacctgacggtcatttccaacaacctggccaacgtctcgaccaccggcttcaagcgtgatcgcgccgaattcgcagacctgctctaccagatcaagcgccagcctGGTGcc                                                                                                                                               <  3:389816‑M1/6‑1 (MQ=255)          gTTCAGGTGGAAGGTACCGTCACGGGTATACGACACGGTGCCGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGa                                                                                                                                          <  3:297921/149‑1 (MQ=255)               ggTGGAAGGTACCGTCACGGGTATACGACACGGTGCCGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACg                                                                                                                                      >  6:407762/1‑148 (MQ=255)                 tGGAAGGTACCGTCACGGGTATACGACACGGTGCCGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGca                                                                                                                                    >  3:170672/1‑148 (MQ=255)                          ccGTCACGGGTATACGACACGGTGCCGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTAcc                                                                                                                          >  5:188775/1‑149 (MQ=255)                          ccGTCACGGGTATACGACACGGTGCCATCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTAc                                                                                                                           <  6:403871/148‑1 (MQ=255)                           cGTCACGGGTATACGACACGGTGCCGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCGACGATACGCACACCGGTAcc                                                                                                                          >  5:34006/1‑148 (MQ=255)                               aCGGGTATACGACACGGTGCCGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCt                                                                                                                     <  3:198421/149‑1 (MQ=255)                                 gggTATACGACACGGTGCCGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTg                                                                                                                    >  8:10728/1‑148 (MQ=255)                                     ataCGACACGGTGCCGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGc                                                                                                               >  4:167792/1‑149 (MQ=255)                                         gACACGGTGCCGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGccc                                                                                                             >  5:332574/1‑147 (MQ=255)                                          acacGGTGCCGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAg                                                                                                          <  6:348112/149‑1 (MQ=255)                                            acGGTGCCGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAggg                                                                                                        >  3:390849/1‑149 (MQ=255)                                                tGCCGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGc                                                                                                    >  4:29694/1‑149 (MQ=255)                                                   cGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAg                                                                                                                 >  4:283373/1‑133 (MQ=255)                                                   cGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAg                                                                                                                 <  3:283373/133‑1 (MQ=255)                                                    gTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCCAGGACAGcgagc                                                                                                >  6:413927/1‑145 (MQ=255)                                                           tGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTgg                                                                                                                                                    <  5:150638/90‑1 (MQ=255)                                                           tGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTgg                                                                                                                                                    >  6:150638/1‑90 (MQ=255)                                                             cAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGa                                                                                                           >  3:402422/1‑129 (MQ=255)                                                             cAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGa                                                                                                           <  4:402422/129‑1 (MQ=255)                                                             cAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTgg                                                                                        <  5:407762/148‑1 (MQ=255)                                                                gATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTc                                                                                     >  2:12027/1‑148 (MQ=255)                                                                      gaagaaACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGGTGCCGGCAACGAAGCTTTTCTGGGTGCGCACGATACGCACAGCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTggg                                                                              <  5:114908/149‑1 (MQ=255)                                                                      gaagaaACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTggg                                                                              >  4:145635/1‑149 (MQ=255)                                                                      gaagaaACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTg                                                                                <  6:188775/147‑1 (MQ=255)                                                                         gaaACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCAc                                                                           <  3:167792/149‑1 (MQ=255)                                                                            gtctcgaccaccggcttcaagcgtgatcgcgccgaattcgcagacctgctctaccagatcaagcgccagcctGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAg                                                                        >  4:2596‑M1/73‑149 (MQ=255)                                                                            aCCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAg                                                                        <  7:186916/149‑1 (MQ=255)                                                                            aCCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAg                                                                        >  8:186916/1‑149 (MQ=255)                                                                             ccGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAgg                                                                       <  3:91786/149‑1 (MQ=255)                                                                              cgcgGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCACGc                                                                      >  6:337744/1‑149 (MQ=255)                                                                               tcgaccaccggcttcaagcgtgatcgcgccgaattcgcagacctgctctaccagatcaagcgccagcctGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCt                                                                     <  3:271759‑M1/80‑1 (MQ=255)                                                                                 gaccaccggcttcaagcgtgatcgcgccgaattcgcagacctgctctaccagatcaagcgccagcctGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTg                                                                    >  4:271759‑M1/68‑148 (MQ=255)                                                                                    cGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCg                                                                                                 <  1:392099/116‑1 (MQ=255)                                                                                    cGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCg                                                                                                 >  2:392099/1‑116 (MQ=255)                                                                                        gACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTg                                                             <  4:170672/148‑1 (MQ=255)                                                                                          cTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATc                                                          <  4:390849/149‑1 (MQ=255)                                                                                          cTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATc                                                          <  3:384398/149‑1 (MQ=255)                                                                                          cTGCCAGGTCCAGCGGGTTGGCGGTGGTTTGCAGGCTGCCGGCAACTAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATc                                                          <  8:62153/149‑1 (MQ=255)                                                                                               aTGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACGGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTa                                                     <  7:10728/149‑1 (MQ=255)                                                                                                        gggTGGTCGGTGTGTTGCAGGCTGCCGGCAAGGAAGCTTTTCTGGGTGCCCACGATCCGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTc                                            <  6:332574/149‑1 (MQ=255)                                                                                                         ggTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCt                                           >  4:21910/1‑149 (MQ=255)                                                                                                              tCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCTGCGaa                                      >  2:339957/1‑149 (MQ=255)                                                                                                               cGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGACCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGATGGCGCATGATCTGGTAGAGCAGGTCTGCGaa                                      >  3:61476/1‑148 (MQ=255)                                                                                                                  tggtTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCTGCGAATTCg                                  >  5:47800/1‑149 (MQ=255)                                                                                                                   ggtTTGCAGGCTGCCGGCAACGGAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCTGCGa                                       >  7:257166/1‑143 (MQ=255)                                                                                                                   ggtTTGCAGGCTGCCGGAAACGATGCTTTTCTTGGTGCCCACTATACTCACACCGGTACCGACCTGCAGGCCCTAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCTGCGa                                       <  8:257166/143‑1 (MQ=255)                                                                                                                     tttGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGGGCTGGATCTGGTAGAGCAGGTCTGCGAATTCGgcg                               >  3:247818/1‑149 (MQ=255)                                                                                                                     tttGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCTGCGAATTCGgcg                               <  1:12027/149‑1 (MQ=255)                                                                                                                       tGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCTGCGAATTCGgcgc                              <  1:339957/148‑1 (MQ=255)                                                                                                                          aGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCTGCGAATTCGGCGCGAt                           >  6:182030/1‑148 (MQ=255)                                                                                                                              tGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAg                                               <  7:375740/124‑1 (MQ=255)                                                                                                                              tGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAg                                               >  8:375740/1‑124 (MQ=255)                                                                                                                                 cGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCTGCGAATTCGGCGCGATCACGCtt                    >  2:245785/1‑148 (MQ=255)                                                                                                                                       cGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCg             <  3:21910/149‑1 (MQ=255)                                                                                                                                        gAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCgg            >  6:318624/1‑149 (MQ=255)                                                                                                                                        gAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCgg            >  7:247587/1‑149 (MQ=255)                                                                                                                                        gAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCgg            >  4:388877/1‑149 (MQ=255)                                                                                                                                        gAAGCTTTTCTGGGTGCCCACGATACGCACACCGGCACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGACgg            >  7:297731/1‑149 (MQ=255)                                                                                                                                        gAAGATTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCgg            >  3:71320/1‑149 (MQ=255)                                                                                                                                           gCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCt                                                                                          <  3:24081/68‑1 (MQ=255)                                                                                                                                           gCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCt                                                                                          >  4:24081/1‑68 (MQ=255)                                                                                                                                               ttCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCTGCGAATTCGGCGCGATCACGCCTGAAGCCGGTGGTc       <  3:29694/147‑1 (MQ=255)                                                                                                                                                tCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCga     <  5:318624/148‑1 (MQ=255)                                                                                                                                                  tGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATGTGGTAGAGCAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGAc  >  4:213514/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   GCCGTCGGAGTTCAGGTGGAAGGTACCGTCACGGGTATACGACACGGTGCCGTCCGGCTGCAGGATCTGGAAGAAACCGCGGCCGTTGACTGCCATGTCCAGCGGGTTGTCGGTGGTTTGCAGGCTGCCGGCAACGAAGCTTTTCTGGGTGCCCACGATACGCACACCGGTACCGACCTGCAGGCCCGAGGGCAGCTCGCTGTCCTGGGTCGACTGGGCACCAGGCTGGCGCTTGATCTGGTAGAGCAGGTCTGCGAATTCGGCGCGATCACGCTTGAAGCCGGTGGTCGAGAC  >  NC_002947/4979044‑4979337

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.