New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5548441 =	56 (0.860)	3 (0.050)	3/246	NT	5.7%	coding (613/2574 nt)	rnr	exoribonuclease R
	?	NC_002947	5548480 =	48 (0.790)					coding (574/2574 nt)	rnr	exoribonuclease R

AGCGGAACTTGCGTGCTTCCTTGACCACATCATTGGGCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACG  >  NC_002947/5548294‑5548589                                                                                                                                                    |                                                                                                                                                     aGCGGAACTTGCGTGCTTCCTTGACCACATCATTGGGCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTc                                                                                                                                                     >  6:366648/1‑149 (MQ=255)    tgctggtcgaagtcatctcccgtgcccacgaaagcgtggtcggccgctatttcgaagaaggcgtcatcggctacgtgaccccggacaacccgaagatccagcaggaagtgctggtgaccgccgggcgcaaaggcggtgccaagatctgc                                                                                                                                                  >  8:319754‑M1/145‑146 (MQ=255)    tgctggtcgaagtcatctcccgtgcccacgaaagcgtggtcggccgctatttcgaagaaggcggcatcggctacgtgaccccggacaacccgaagatccagcaggaagtgctggtgaccgccgggcgcaacggcggtgccaagaTCGGc                                                                                                                                                  >  2:2646‑M1/145‑149 (MQ=255)     gAACTTGCGTGCTTCCTTGACCACATCATTGGGCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGc                                                                                                                                                  >  5:286217/1‑148 (MQ=255)         ttGCGTGCTTCCTTGACCACATCATTGGGCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGc                                                                                                                                                  >  7:43477/1‑144 (MQ=255)         ttGCGTGCTTCCTTGACCACATCATTGGGCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGc                                                                                                                                                  <  8:43477/144‑1 (MQ=255)         gtcgaagtcatctcccgtgcccacgaaagcgtggtcgaccgctatttcgaagaaggcggcatcggctacgtgaccccggacaacccgaagatccagcaggaagtgctggtgaccgccgggcgcaacggcggtgccaagaTCGGCCAg                                                                                                                                               >  7:221044‑M1/140‑147 (MQ=255)           gCGTGCTTCCTTGACCACATCATTGGGCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTggg                                                                                                                                           >  6:13278/1‑149 (MQ=255)           gCGTGCTTCCTTGACCACATCATTGGGCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTgg                                                                                                                                            <  5:191874/148‑1 (MQ=255)           gCGTGCTTCCTTGACCACATCATTGGGCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTg                                                                                                                                             <  2:153342/147‑1 (MQ=255)                   ccTTGACCACATCATTGGGCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGtgatctt                                                                                                                                    <  2:347673/148‑1 (MQ=255)                    cTTGACCACATCATTGGGCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGtgatcttga                                                                                                                                  >  6:103379/1‑149 (MQ=255)                    cTTGACCACATCATTGGGCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGtgatcttg                                                                                                                                   <  3:90176/148‑1 (MQ=255)                      tGACCACATCATTGGGCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGtgatcttgatc                                                                                                                                >  5:21801/1‑149 (MQ=255)                       gACCACATCATTGGGCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGtgatcttgat                                                                                                                                 <  1:109034/147‑1 (MQ=255)                        aCCACATCATTGGGCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGAtctc                                                                                                                              >  3:212910/1‑149 (MQ=255)                         ccACATCATTGGGCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGAtctc                                                                                                                              >  1:360229/1‑148 (MQ=255)                               catTGGGCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAAc                                                                                                                       >  4:285069/1‑149 (MQ=255)                                 ttGGGCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTg                                                                                                                     >  3:183134/1‑149 (MQ=255)                                   gggCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTgg                                                                                                                    <  4:183134/148‑1 (MQ=255)                                       gtggtcggccgctatttcgaagaaggcggcatcggctacgtgaccccggacaacccgaagatccagcaggaagtgctggtgaccgccgggcgcaacggcggtgccaagaTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGAt                                                                                                               >  1:361130‑M1/110‑149 (MQ=255)                                       cAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGt                                                                                                                                              <  4:390280/118‑1 (MQ=255)                                       cAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGt                                                                                                                                              >  3:390280/1‑118 (MQ=255)                                           cGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTg                                                                                                           <  5:366648/149‑1 (MQ=255)                                                  aaTGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCAccgc                                                                                                    <  6:383821/149‑1 (MQ=255)                                                        gTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTg                                                                                               <  6:21801/148‑1 (MQ=255)                                                           agaaggcggcatcggctacgtgaccccggacaacccgaagatccagcaggaagtgctggtgaccgccgggcgcaacggcggtgccaagaTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCa                                                                                                        >  5:73368‑M1/90‑136 (MQ=255)                                                           agaaggcggcatcggctacgtgaccccggacaacccgaagatccagcaggaagtgctggtgaccgccgggcgcaacggcggtgccaagaTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCa                                                                                                        <  6:73368‑M1/47‑1 (MQ=255)                                                              gcgcAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCcgg                                                                                        >  1:278507/1‑149 (MQ=255)                                                               cgcAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCcggc                                                                                       <  3:285069/149‑1 (MQ=255)                                                                      cAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCAc                                                                                 >  4:312297/1‑148 (MQ=255)                                                                        aCGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAg                                                                              >  2:354997/1‑149 (MQ=255)                                                                          gTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGcc                                                                                           >  4:222957/1‑134 (MQ=255)                                                                          gTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGcc                                                                                           <  3:222957/134‑1 (MQ=255)                                                                          gTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCa                                                                            <  1:354997/149‑1 (MQ=255)                                                                           tCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCAc                                                                           <  7:377983/149‑1 (MQ=255)                                                                                 tCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCct                                                                      <  1:291801/148‑1 (MQ=255)                                                                                   cATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGTCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCctgc                                                                    <  2:213425/148‑1 (MQ=255)                                                                                   cATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCctgc                                                                    <  3:312297/148‑1 (MQ=255)                                                                                     tGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTgg                                                                                                          >  6:178559/1‑108 (MQ=255)                                                                                     tGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTgg                                                                                                          <  5:178559/108‑1 (MQ=255)                                                                                      gCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCcggcg                                                                                      >  5:75801/1‑127 (MQ=255)                                                                                      gCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCcggcg                                                                                      <  6:75801/127‑1 (MQ=255)                                                                                       cccGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGa                                                                <  4:212910/148‑1 (MQ=255)                                                                                                      ttGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCGCCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCgg                                                >  4:254688/1‑149 (MQ=255)                                                                                                        gCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCggg                                               <  8:321052/148‑1 (MQ=255)                                                                                                         caggaagtgctggtgaccgccgggcgcaacggcggtgccaagaTCGGCCa                                                                                                                                                >  5:307983‑M1/44‑50 (MQ=255)                                                                                                         caggaagtgctggtgaccgccgggcgcaacggcggtgccaagaTCGGCCa                                                                                                                                                <  6:307983‑M1/7‑1 (MQ=255)                                                                                                          cGATTACTTCTACTTCATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCTGTGGGTGATCTTGATCTCGACGAACTGTCCGATCTTGGCACCTCCGTTGCGCCCGGCTGTCACCAGCACTTCGTGCTGGATGTTCGGGTTGTCCGTGGt                                             <  6:329097/148‑1 (MQ=255)                                                                                                          cGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTc                                            <  2:360229/149‑1 (MQ=255)                                                                                                           gATGACATCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCACGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGt                                             >  5:329097/1‑147 (MQ=255)                                                                                                                 ttCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGc                                     >  8:211418/1‑149 (MQ=255)                                                                                                                   cGACCACATCGCCTTGCGGCTGGAAGCGGGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGcc                                    >  1:227547/1‑148 (MQ=255)                                                                                                                    gACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGa                                  >  7:371374/1‑149 (MQ=255)                                                                                                                         caTCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCGCCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATgccg                             <  3:254688/149‑1 (MQ=255)                                                                                                                         caTCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATgccg                             >  5:194000/1‑149 (MQ=255)                                                                                                                             gCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCggg                                               >  8:296295/1‑127 (MQ=255)                                                                                                                             gCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCggg                                               <  7:296295/127‑1 (MQ=255)                                                                                                                             gCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCctt                         <  2:278507/149‑1 (MQ=255)                                                                                                                              ccTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCcttc                        <  5:103379/149‑1 (MQ=255)                                                                                                                               cTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCACcttct                       >  5:342471/1‑149 (MQ=255)                                                                                                                                    ggCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGa                   >  8:96155/1‑148 (MQ=255)                                                                                                                                     gCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGaaa                 <  8:371374/149‑1 (MQ=255)                                                                                                                                     gCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGaaa                 >  2:371799/1‑149 (MQ=255)                                                                                                                                       tGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCAGGTAGCCGATGCCGCctt                         >  5:322744/1‑139 (MQ=255)                                                                                                                                       tGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCctt                         <  6:322744/139‑1 (MQ=255)                                                                                                                                          aaGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCcttctt                      >  7:342893/1‑139 (MQ=255)                                                                                                                                          aaGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCcttctt                      <  8:342893/139‑1 (MQ=255)                                                                                                                                                 gAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGAcc     <  5:264101/149‑1 (MQ=255)                                                                                                                                                    TCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACg  >  7:211418‑M1/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     AGCGGAACTTGCGTGCTTCCTTGACCACATCATTGGGCCAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACG  >  NC_002947/5548294‑5548589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.