New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5548441 =	56 (0.860)	3 (0.050)	3/246	NT	5.7%	coding (613/2574 nt)	rnr	exoribonuclease R
	?	NC_002947	5548480 =	48 (0.790)					coding (574/2574 nt)	rnr	exoribonuclease R

CAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACGCTTTCGTGGGCACGGGAGATGACTTCGACCAGCA  >  NC_002947/5548332‑5548623                                                                                                                                                     |                                                                                                                                                gtggtcggccgctatttcgaagaaggcggcatcggctacgtgaccccggacaacccgaagatccagcaggaagtgctggtgaccgccgggcgcaacggcggtgccaagaTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGAt                                                                                                                                                 >  1:361130‑M1/110‑149 (MQ=255)     cGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTg                                                                                                                                             <  5:366648/149‑1 (MQ=255)            aaTGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCAccgc                                                                                                                                      <  6:383821/149‑1 (MQ=255)                  gTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTg                                                                                                                                 <  6:21801/148‑1 (MQ=255)                     agaaggcggcatcggctacgtgaccccggacaacccgaagatccagcaggaagtgctggtgaccgccgggcgcaacggcggtgccaagaTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCa                                                                                                                                          <  6:73368‑M1/47‑1 (MQ=255)                     agaaggcggcatcggctacgtgaccccggacaacccgaagatccagcaggaagtgctggtgaccgccgggcgcaacggcggtgccaagaTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCa                                                                                                                                          >  5:73368‑M1/90‑136 (MQ=255)                        gcgcAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCcgg                                                                                                                          >  1:278507/1‑149 (MQ=255)                         cgcAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCcggc                                                                                                                         <  3:285069/149‑1 (MQ=255)                                cAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCAc                                                                                                                   >  4:312297/1‑148 (MQ=255)                                  aCGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAg                                                                                                                >  2:354997/1‑149 (MQ=255)                                    gTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGcc                                                                                                                             <  3:222957/134‑1 (MQ=255)                                    gTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGcc                                                                                                                             >  4:222957/1‑134 (MQ=255)                                    gTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCa                                                                                                              <  1:354997/149‑1 (MQ=255)                                     tCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCAc                                                                                                             <  7:377983/149‑1 (MQ=255)                                           tCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCct                                                                                                        <  1:291801/148‑1 (MQ=255)                                             cATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGTCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCctgc                                                                                                      <  2:213425/148‑1 (MQ=255)                                             cATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCctgc                                                                                                      <  3:312297/148‑1 (MQ=255)                                               tGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTgg                                                                                                                                            <  5:178559/108‑1 (MQ=255)                                               tGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTgg                                                                                                                                            >  6:178559/1‑108 (MQ=255)                                                gCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCcggcg                                                                                                                        <  6:75801/127‑1 (MQ=255)                                                gCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCcggcg                                                                                                                        >  5:75801/1‑127 (MQ=255)                                                 cccGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGa                                                                                                  <  4:212910/148‑1 (MQ=255)                                                                ttGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCGCCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCgg                                                                                  >  4:254688/1‑149 (MQ=255)                                                                  gCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCggg                                                                                 <  8:321052/148‑1 (MQ=255)                                                                    cGATTACTTCTACTTCATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCTGTGGGTGATCTTGATCTCGACGAACTGTCCGATCTTGGCACCTCCGTTGCGCCCGGCTGTCACCAGCACTTCGTGCTGGATGTTCGGGTTGTCCGTGGt                                                                               <  6:329097/148‑1 (MQ=255)                                                                    cGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTc                                                                              <  2:360229/149‑1 (MQ=255)                                                                     gATGACATCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCACGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGt                                                                               >  5:329097/1‑147 (MQ=255)                                                                           ttCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGc                                                                       >  8:211418/1‑149 (MQ=255)                                                                             cGACCACATCGCCTTGCGGCTGGAAGCGGGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGcc                                                                      >  1:227547/1‑148 (MQ=255)                                                                              gACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGa                                                                    >  7:371374/1‑149 (MQ=255)                                                                                   caTCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCGCCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATgccg                                                               <  3:254688/149‑1 (MQ=255)                                                                                   caTCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATgccg                                                               >  5:194000/1‑149 (MQ=255)                                                                                       gCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCggg                                                                                 <  7:296295/127‑1 (MQ=255)                                                                                       gCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCggg                                                                                 >  8:296295/1‑127 (MQ=255)                                                                                       gCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCctt                                                           <  2:278507/149‑1 (MQ=255)                                                                                        ccTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCcttc                                                          <  5:103379/149‑1 (MQ=255)                                                                                         cTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCACcttct                                                         >  5:342471/1‑149 (MQ=255)                                                                                              ggCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGa                                                     >  8:96155/1‑148 (MQ=255)                                                                                               gCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGaaa                                                   <  8:371374/149‑1 (MQ=255)                                                                                               gCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGaaa                                                   >  2:371799/1‑149 (MQ=255)                                                                                                 tGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCAGGTAGCCGATGCCGCctt                                                           >  5:322744/1‑139 (MQ=255)                                                                                                 tGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCctt                                                           <  6:322744/139‑1 (MQ=255)                                                                                                    aaGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCcttctt                                                        >  7:342893/1‑139 (MQ=255)                                                                                                    aaGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCcttctt                                                        <  8:342893/139‑1 (MQ=255)                                                                                                      tgccaagatcggccagttcgtcgagatcaagatcacccactggccgaTCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCcttct                                                         >  5:73368‑M2/48‑136 (MQ=255)                                                                                                      tgccaagatcggccagttcgtcgagatcaagatcacccactggccgaTCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCcttct                                                         <  6:73368‑M2/89‑1 (MQ=255)                                                                                                           gAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGAcc                                       <  5:264101/149‑1 (MQ=255)                                                                                                             atcggccagttcgtcgagatcaagatcacccactggccgaTCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCAc                                     >  1:361130‑M2/41‑149 (MQ=255)                                                                                                              TCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACg                                    >  7:211418‑M1/1‑149 (MQ=255)                                                                                                                      TGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACGCTTTCGTg                            >  2:227547‑M1/1‑149 (MQ=255)                                                                                                                        ggTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACGCTTTCGTgg                           <  6:194000/148‑1 (MQ=255)                                                                                                                             tcttgatctCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACGCTTTCGTGGGCACgg                     >  5:412659/1‑149 (MQ=255)                                                                                                                              cttgatctCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACGCTTTCGTGGGCACgg                     >  7:30346/1‑148 (MQ=255)                                                                                                                                 gatctCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACGCTTTCGTGGGCACggg                    <  6:412659/146‑1 (MQ=255)                                                                                                                                 gatctCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACGCTTTCGTGGGCACgg                     <  8:98072/145‑1 (MQ=255)                                                                                                                                 gatctCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACGCTTTCGTGGGCACGGga                   <  5:13278/147‑1 (MQ=255)                                                                                                                                   tctcGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACGCTTTCGTGGGCACGGGAGAt                >  5:245374/1‑148 (MQ=255)                                                                                                                                       gacgaACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACGCTTTCGTGGGCACGGGAGAt                >  4:3638/1‑144 (MQ=255)                                                                                                                                       gacgaACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACGCTTTCGTGGGCACGGGAGAt                <  3:3638/144‑1 (MQ=255)                                                                                                                                       gacgaACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACGCTTTCGTGGGCACGGGAGATGa              <  8:30346/146‑1 (MQ=255)                                                                                                                                       gacgaACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACGCTTTCGTGGGCACGGGAGATGACtt           >  7:68084/1‑149 (MQ=255)                                                                                                                                       gacgaACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCACCTTCTTCGAAATAGCGGCCGACCACGCTTTCGTGGGCACGGGAGAt                <  6:342471/144‑1 (MQ=255)                                                                                                                                             ctggccgaTCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGTCGACCACGCTTTCGTGGGCACGGGAGATGACTTCGAc       >  7:221044‑M2/9‑147 (MQ=255)                                                                                                                                              tggccgaTCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCctg                                                                                                       <  6:307983‑M2/43‑1 (MQ=255)                                                                                                                                              tggccgaTCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCctg                                                                                                       >  5:307983‑M2/8‑50 (MQ=255)                                                                                                                                                gccgaTCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACGCTTTCGTGGGCACGGGAGATGACTTCGACCAGCa  >  2:2646‑M2/6‑149 (MQ=255)                                                                                                                                                gcagaTCTTGGCACCGCCTTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGACGCCTTCTTCGAAATAGCGGCCGACCACGCTTTCGTGGGCACGGGAGATGACTTCGACCAGCa  >  8:319754‑M2/6‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                CAGACGTGCGGAATGTCGTAGCTGCGCAGGGCAACGTCGATTTCCATGCCCGGCGCCATGTAGTTGCCGATGACTTCGACCACATCGCCTTGCGGCTGGAAGCGCGGAGTCGGCCAGTGGGTGATCTTGATCTCGACGAACTGGCCGATCTTGGCACCGCCGTTGCGCCCGGCGGTCACCAGCACTTCCTGCTGGATCTTCGGGTTGTCCGGGGTCACGTAGCCGATGCCGCCTTCTTCGAAATAGCGGCCGACCACGCTTTCGTGGGCACGGGAGATGACTTCGACCAGCA  >  NC_002947/5548332‑5548623

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.