New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5981512 =84 (1.290)3 (0.050) 3/256 NT 3.8% coding (2157/5049 nt) PP_5242 GAF domain‑containing sensor histidine kinase
?NC_002947 5981582 = 71 (1.130)coding (2227/5049 nt) PP_5242 GAF domain‑containing sensor histidine kinase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 101 total aligned reads displayed.

CGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCAT  >  NC_002947/5981364‑5981658
                                                                                                                                                    |                                                                                                                                                  
cGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGaa                                                                                                                                                    <  5:187827/149‑1 (MQ=255)
 gCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCAAGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACCCGCCAGCCCCTGAGGGTTTGCAGCGGATGACTGCCAAg                                                                                                                                                   >  8:64328/1‑149 (MQ=255)
  cccGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGc                                                                                                                                                  <  3:195774/149‑1 (MQ=255)
   ccGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCg                                                                                                                                                 >  1:92533/1‑149 (MQ=255)
    cGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGt                                                                                                                                                >  5:230655/1‑149 (MQ=255)
     gTGCACCATCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGtt                                                                                                                                               <  1:307172/149‑1 (MQ=255)
      tGCACCAGCGCGCCTCGCTACATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTc                                                                                                                                              <  3:390052/149‑1 (MQ=255)
        cACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGGTTGCAGCGGATGACTGCGAAGCGTTCCt                                                                                                                                            >  3:240549/1‑149 (MQ=255)
          ccAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTg                                                                                                                                           >  3:223045/1‑148 (MQ=255)
             gcgcgcCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGc                                                                                                                                       <  2:299526/149‑1 (MQ=255)
              cgcgcCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCt                                                                                                                                      >  4:267680/1‑149 (MQ=255)
               gcgcCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCCGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCtt                                                                                                                                     >  6:226312/1‑149 (MQ=255)
                cgcCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCttt                                                                                                                                    <  2:92533/149‑1 (MQ=255)
                 gcCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGAttt                                                                                                                                    >  7:12979/1‑148 (MQ=255)
                  ccTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTa                                                                                                                                  <  4:300435/149‑1 (MQ=255)
                   cTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGCAGCGTTCCTGCAGCTTTTAc                                                                                                                                 >  5:202336/1‑149 (MQ=255)
                   cTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTAc                                                                                                                                 <  2:283673/149‑1 (MQ=255)
                     cGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTAcgc                                                                                                                               <  5:216629/149‑1 (MQ=255)
                              tgcgtgacagttgcatgtcgcactccgtcgccatgcaggcgatggcaaagccatgcgtggcgcggctttccagcgtggcgctgtgctgcagcaactgctcggcggtgtgcaggtaaccAGCg                                                                                                                                                 <  5:305080‑M1/4‑1 (MQ=255)
                              tgcgtgacagttgcatgtcgcactccgtcgccatgcaggcgatggcaaagccatgcgtggcgcggctttccagcgtggcgctgtgctgcagcaactgctcggcggtgtgcaggtaaccAGCg                                                                                                                                                 >  6:305080‑M1/119‑122 (MQ=255)
                              caCGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGc                                                                                                                       <  3:267680/148‑1 (MQ=255)
                               aCGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCCGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGcat                                                                                                                     >  2:98989/1‑149 (MQ=255)
                                    tCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGGTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCt                                                                                                                                            >  5:120815/1‑121 (MQ=255)
                                    tCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCt                                                                                                                                            <  6:120815/121‑1 (MQ=255)
                                      gCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATgcgc                                                                                                              >  6:20759/1‑149 (MQ=255)
                                       cccTGGCCATGCGCCAGGCTTGGCCAGGGCGCACGCCCGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCa                                                                                                             >  3:281451/1‑149 (MQ=255)
                                       cccTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCa                                                                                                             >  1:40423/1‑149 (MQ=255)
                                       cccTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCa                                                                                                             >  1:291827/1‑149 (MQ=255)
                                       cccTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCa                                                                                                             >  5:329122/1‑149 (MQ=255)
                                        ccTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCac                                                                                                            >  1:389850/1‑149 (MQ=255)
                                         cTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCacg                                                                                                           >  6:116360/1‑149 (MQ=255)
                                                  cgcCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCGGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCgg                                                                                                   <  7:64328/148‑1 (MQ=255)
                                                  cgcCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCgg                                                                                                   <  2:291827/148‑1 (MQ=255)
                                                   gcCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCggg                                                                                                  >  2:326061/1‑148 (MQ=255)
                                                   gcCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGc                                                                                                 <  1:231197/149‑1 (MQ=255)
                                                    ccAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCa                                                                                                <  6:127768/149‑1 (MQ=255)
                                                     cAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCAc                                                                                               <  2:283413/149‑1 (MQ=255)
                                                     cAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCAc                                                                                               <  2:265704/149‑1 (MQ=255)
                                                        gCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCtt                                                                                            >  5:409257/1‑149 (MQ=255)
                                                         cTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTc                                                                                           <  1:326061/149‑1 (MQ=255)
                                                          ttGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTc                                                                                           >  6:144174/1‑148 (MQ=255)
                                                            ggCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCg                                                                                          <  8:232262/147‑1 (MQ=255)
                                                            aagcctggCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAg                                                                                        <  2:6371/143‑1 (MQ=255)
                                                             gCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAg                                                                                        >  2:37373/1‑148 (MQ=255)
                                                                  ggCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGcc                                                                                  >  3:128269/1‑149 (MQ=255)
                                                                       atggcaaagccatgcgtggcgcggctttccagcgtggcgctgtgctgcagcaactgctcggcggtgtgcaggtaaccAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTgg                                                                             >  4:364323‑M1/78‑149 (MQ=255)
                                                                       aCGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGATCAGGCCGCTg                                                                              <  2:389850/148‑1 (MQ=255)
                                                                       aCGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTgg                                                                             <  1:322851/149‑1 (MQ=255)
                                                                         gCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGtt                                                                           <  6:230655/149‑1 (MQ=255)
                                                                               ggTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTg                                                                      >  6:61275/1‑148 (MQ=255)
                                                                                gtgtTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGca                                                                    <  3:251193/149‑1 (MQ=255)
                                                                                   ttgttCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCacac                                                                 <  6:409257/149‑1 (MQ=255)
                                                                                     gttCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCg                                                                                          <  7:186034/122‑1 (MQ=255)
                                                                                     gttCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACAccg                                                               >  1:263958/1‑149 (MQ=255)
                                                                                      ttCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACAccgc                                                              <  6:329122/149‑1 (MQ=255)
                                                                                       tCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACAccgcc                                                             >  1:210543/1‑149 (MQ=255)
                                                                                        cGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACAccgcc                                                             <  5:144174/148‑1 (MQ=255)
                                                                                        cGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACAccgcc                                                             <  5:116360/148‑1 (MQ=255)
                                                                                         gAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACAccgccg                                                            <  7:60799/148‑1 (MQ=255)
                                                                                           gcggctttccagcgtggcgctgtgctgcagcaactgctcggcggtgtgcaggtaaccAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGAGACGCGGGCACCTTCGAGCAGGCCGCTGGTTAc                                                                         <  7:290338‑M1/76‑1 (MQ=255)
                                                                                           gcggctttccagcgtggcgctgtgctgcagcaactgctcggcggtgtgcaggtaaccAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGAGACGCGGGCACCTTCGAGCAGGCCGCTGGTTAc                                                                         >  8:290338‑M1/58‑133 (MQ=255)
                                                                                           gCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGc                                                         <  1:37373/149‑1 (MQ=255)
                                                                                            cTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGCTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCa                                                        <  3:322960/149‑1 (MQ=255)
                                                                                               gccagccaGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAg                                                       <  4:128269/147‑1 (MQ=255)
                                                                                                 cagccagcTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTtgc                                                   >  6:91484/1‑149 (MQ=255)
                                                                                                  agccagcTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCTCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAg                                                       <  7:65792/144‑1 (MQ=255)
                                                                                                  agccagcTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTtgct                                                  >  7:205260/1‑149 (MQ=255)
                                                                                                   gccagcTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTtgctg                                                 <  5:131700/149‑1 (MQ=255)
                                                                                                    ccagcTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTtgctgc                                                <  8:302527/149‑1 (MQ=255)
                                                                                                     cagcTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTACGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTtgctg                                                 >  3:52341/1‑147 (MQ=255)
                                                                                                     cagcTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTACGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTgca                                               <  4:52341/149‑1 (MQ=255)
                                                                                                       gcTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTgcag                                              >  4:270074/1‑148 (MQ=255)
                                                                                                           cAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCt                                                                       >  8:264034/1‑119 (MQ=255)
                                                                                                           cAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCt                                                                       <  7:264034/119‑1 (MQ=255)
                                                                                                            aaCGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAgc                                        >  3:244726/1‑149 (MQ=255)
                                                                                                              cgcgCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAgcgc                                      <  5:20759/149‑1 (MQ=255)
                                                                                                               gcgcCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGcc                                     <  2:40423/149‑1 (MQ=255)
                                                                                                                           gCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTgcag                                              >  4:357579/1‑128 (MQ=255)
                                                                                                                           gCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTgcag                                              <  3:357579/128‑1 (MQ=255)
                                                                                                                            cGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGc                         <  4:240549/148‑1 (MQ=255)
                                                                                                                               gTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGGAGGCCGCTGGTTAcc                                                                        <  8:208744/98‑1 (MQ=255)
                                                                                                                               gTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTAcc                                                                        >  7:208744/1‑98 (MQ=255)
                                                                                                                               gTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCcgcg                     >  5:137346/1‑149 (MQ=255)
                                                                                                                               gTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCcgcg                     >  7:264428/1‑149 (MQ=255)
                                                                                                                                   gCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCAc                 >  3:234434/1‑149 (MQ=255)
                                                                                                                                    cAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACg                >  6:178798/1‑149 (MQ=255)
                                                                                                                                    cAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACg                >  1:45885/1‑149 (MQ=255)
                                                                                                                                      gCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTgcagca                                            >  1:18846/1‑119 (MQ=255)
                                                                                                                                      gCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTgcagca                                            <  2:18846/119‑1 (MQ=255)
                                                                                                                                        ggATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATg            <  4:244726/149‑1 (MQ=255)
                                                                                                                                             aCTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCttt       >  1:384302/1‑149 (MQ=255)
                                                                                                                                             aCTGCGAAGCGTGCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCttt       <  6:202336/149‑1 (MQ=255)
                                                                                                                                              cTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTg      <  5:61275/149‑1 (MQ=255)
                                                                                                                                               tGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGc     >  4:303282/1‑149 (MQ=255)
                                                                                                                                                 cGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTg      >  3:278706/1‑146 (MQ=255)
                                                                                                                                                 cGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTg      <  4:278706/146‑1 (MQ=255)
                                                                                                                                                 cGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGc     <  6:137346/147‑1 (MQ=255)
                                                                                                                                                  gAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCAt  <  8:264428/149‑1 (MQ=255)
                                                                                                                                                   aaGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTg                               <  5:415669/119‑1 (MQ=255)
                                                                                                                                                   aaGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTg                               >  6:415669/1‑119 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
CGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCAT  >  NC_002947/5981364‑5981658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.