New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5981512 =	84 (1.290)	3 (0.050)	3/256	NT	3.8%	coding (2157/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
	?	NC_002947	5981582 =	71 (1.130)					coding (2227/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
Rejected: Frequency below/above cutoff threshold.

ACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGACATGCAACTGTCACGCACGATCGCGGCCGAGGCCCGCCTCAC  >  NC_002947/5981435‑5981724                                                                                                                                                     |                                                                                                                                               atggcaaagccatgcgtggcgcggctttccagcgtggcgctgtgctgcagcaactgctcggcggtgtgcaggtaaccAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTgg                                                                                                                                               >  4:364323‑M1/78‑149 (MQ=255) aCGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGATCAGGCCGCTg                                                                                                                                                <  2:389850/148‑1 (MQ=255) aCGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTgg                                                                                                                                               <  1:322851/149‑1 (MQ=255)   gCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGtt                                                                                                                                             <  6:230655/149‑1 (MQ=255)         ggTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTg                                                                                                                                        >  6:61275/1‑148 (MQ=255)          gtgtTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGca                                                                                                                                      <  3:251193/149‑1 (MQ=255)             ttgttCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCacac                                                                                                                                   <  6:409257/149‑1 (MQ=255)               gttCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACAccg                                                                                                                                 >  1:263958/1‑149 (MQ=255)                ttCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACAccgc                                                                                                                                <  6:329122/149‑1 (MQ=255)                 tCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACAccgcc                                                                                                                               >  1:210543/1‑149 (MQ=255)                  cGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACAccgcc                                                                                                                               <  5:144174/148‑1 (MQ=255)                  cGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACAccgcc                                                                                                                               <  5:116360/148‑1 (MQ=255)                   gAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACAccgccg                                                                                                                              <  7:60799/148‑1 (MQ=255)                     gcggctttccagcgtggcgctgtgctgcagcaactgctcggcggtgtgcaggtaaccAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGAGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTAc                                                                                                                                           <  7:290338‑M1/76‑1 (MQ=255)                     gcggctttccagcgtggcgctgtgctgcagcaactgctcggcggtgtgcaggtaaccAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGAGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTAc                                                                                                                                           >  8:290338‑M1/58‑133 (MQ=255)                     gCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGc                                                                                                                           <  1:37373/149‑1 (MQ=255)                      cTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGCTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCa                                                                                                                          <  3:322960/149‑1 (MQ=255)                         gccagccaGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAg                                                                                                                         <  4:128269/147‑1 (MQ=255)                           cagccagcTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTtgc                                                                                                                     >  6:91484/1‑149 (MQ=255)                            agccagcTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCTCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAg                                                                                                                         <  7:65792/144‑1 (MQ=255)                            agccagcTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTtgct                                                                                                                    >  7:205260/1‑149 (MQ=255)                            agccagcTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCCCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAg                                                                                                                         >  8:65792/1‑144 (MQ=255)                             gccagcTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTtgctg                                                                                                                   <  5:131700/149‑1 (MQ=255)                              ccagcTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTtgctgc                                                                                                                  <  8:302527/149‑1 (MQ=255)                               cagcTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTACGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTtgctg                                                                                                                   >  3:52341/1‑147 (MQ=255)                               cagcTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTACGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTgca                                                                                                                 <  4:52341/149‑1 (MQ=255)                                 gcTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTgcag                                                                                                                >  4:270074/1‑148 (MQ=255)                                     cAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCt                                                                                                                                         <  7:264034/119‑1 (MQ=255)                                     cAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCt                                                                                                                                         >  8:264034/1‑119 (MQ=255)                                      aaCGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAgc                                                                                                          >  3:244726/1‑149 (MQ=255)                                        cgcgCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAgcgc                                                                                                        <  5:20759/149‑1 (MQ=255)                                         gcgcCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGcc                                                                                                       <  2:40423/149‑1 (MQ=255)                                                     gCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTgcag                                                                                                                >  4:357579/1‑128 (MQ=255)                                                     gCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTgcag                                                                                                                <  3:357579/128‑1 (MQ=255)                                                      cGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGc                                                                                           <  4:240549/148‑1 (MQ=255)                                                         gTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGGAGGCCGCTGGTTAcc                                                                                                                                          <  8:208744/98‑1 (MQ=255)                                                         gTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTAcc                                                                                                                                          >  7:208744/1‑98 (MQ=255)                                                         gTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCcgcg                                                                                       >  7:264428/1‑149 (MQ=255)                                                         gTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCcgcg                                                                                       >  5:137346/1‑149 (MQ=255)                                                             gCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCAc                                                                                   >  3:234434/1‑149 (MQ=255)                                                              cAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACg                                                                                  >  1:45885/1‑149 (MQ=255)                                                              cAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACg                                                                                  >  6:178798/1‑149 (MQ=255)                                                                gCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTgcagca                                                                                                              >  1:18846/1‑119 (MQ=255)                                                                gCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTgcagca                                                                                                              <  2:18846/119‑1 (MQ=255)                                                                  ggATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATg                                                                              <  4:244726/149‑1 (MQ=255)                                                                       aCTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCttt                                                                         >  1:384302/1‑149 (MQ=255)                                                                       aCTGCGAAGCGTGCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCttt                                                                         <  6:202336/149‑1 (MQ=255)                                                                        cTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTg                                                                        <  5:61275/149‑1 (MQ=255)                                                                         tGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGc                                                                       >  4:303282/1‑149 (MQ=255)                                                                         gtaaccagcggcctgctcgaaggtgcccgcgtctcgtgcgcatgatgcggcttcgcgtaaaagctgcaggaacgctGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCcgc                                                                                        >  8:290338‑M2/77‑133 (MQ=255)                                                                         gtaaccagcggcctgctcgaaggtgcccgcgtctcgtgcgcatgatgcggcttcgcgtaaaagctgcaggaacgctGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCcgc                                                                                        <  7:290338‑M2/57‑1 (MQ=255)                                                                           cGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTg                                                                        >  3:278706/1‑146 (MQ=255)                                                                           cGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTg                                                                        <  4:278706/146‑1 (MQ=255)                                                                           cGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGc                                                                       <  6:137346/147‑1 (MQ=255)                                                                            gAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCAt                                                                    <  8:264428/149‑1 (MQ=255)                                                                             ccagcggcctgctcgaaggtgcccgcgtcgcgtgcgcatgatgcggcttcgcgtaaaagctgcaggaacgctGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCAt                                                                    >  4:364323‑M2/73‑149 (MQ=255)                                                                             aaGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTg                                                                                                 <  5:415669/119‑1 (MQ=255)                                                                             aaGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTg                                                                                                 >  6:415669/1‑119 (MQ=255)                                                                                 GTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCt                                                               <  8:296539‑M1/149‑1 (MQ=255)                                                                                  ttCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTg                                                              >  7:338654/1‑149 (MQ=255)                                                                                       gCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGGCCAGCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATg                                                          >  1:287657/1‑149 (MQ=255)                                                                                       gCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGc                                                                       >  5:383870/1‑135 (MQ=255)                                                                                       gCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGc                                                                       <  6:383870/135‑1 (MQ=255)                                                                                       gCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATgg                                                         >  7:85422/1‑149 (MQ=255)                                                                                               tACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGa                                                  <  3:303282/148‑1 (MQ=255)                                                                                                aCGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAg                                                 <  5:178798/148‑1 (MQ=255)                                                                                                    gAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGa                                            <  2:210543/149‑1 (MQ=255)                                                                                                    gAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGa                                            >  6:224818/1‑149 (MQ=255)                                                                                                      aGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGACa                                          <  4:234434/149‑1 (MQ=255)                                                                                                          gCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGACATGc                                       >  7:134242/1‑148 (MQ=255)                                                                                                           catcatGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGATATGCaa                                     <  5:226312/149‑1 (MQ=255)                                                                                                           catcatGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGACATGCaa                                     <  2:45885/149‑1 (MQ=255)                                                                                                            atcatGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGACATGCAAc                                    >  3:222355/1‑149 (MQ=255)                                                                                                             tcatGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGACATGCAACt                                   >  4:401880/1‑149 (MQ=255)                                                                                                                tGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGACATGCAACTGTc                                <  8:134242/149‑1 (MQ=255)                                                                                                                             cgGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGACATGCAACTGTCACGCACGATcgcg                   <  2:196094/149‑1 (MQ=255)                                                                                                                              ggg‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGACATg                                        >  1:371393/1‑127 (MQ=255)                                                                                                                              ggg‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGACATg                                        <  2:371393/127‑1 (MQ=255)                                                                                                                               gg‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGACATGCAACTGTCACGCACGATCGCGGc                 <  7:296539/149‑1 (MQ=255)                                                                                                                                         aaGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGACATGCAACTGTCACGCACGATCGCGGCCGAGGCCCg        >  8:83779/2‑149 (MQ=255)                                                                                                                                           gCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTCCGACATGCAACTGTCACGAACGATCGCGGCCCAGGCCCGc       >  3:253849/1‑148 (MQ=255)                                                                                                                                              ggCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGACATGCAACTGTCACGCACGATCGCGGCCGAGGCCCGCCTCa   >  5:320014/1‑149 (MQ=255)                                                                                                                                               gCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGACATGCAACTGTCACGCACGATCGCGGCCGAGGCCCGCCTCAc  <  4:223045/149‑1 (MQ=255)                                                                                                                                                 cgctGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGACATGCAACTGTcacgca                           <  5:305080‑M2/118‑1 (MQ=255)                                                                                                                                                 cgctGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGACATGCAACTGTcacgca                           >  6:305080‑M2/5‑122 (MQ=255)                                                                                                                                                     |                                                                                                                                               ACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATCATGCGCACGCGACGCGGG‑CACCTTCGAGCAGGCCGCTGGTTACCTGCACACCGCCGAGCAGTTGCTGCAGCACAGCGCCACGCTGGAAAGCCGCGCCACGCATGGCTTTGCCATCGCCTGCATGGCGACGGAGTGCGACATGCAACTGTCACGCACGATCGCGGCCGAGGCCCGCCTCAC  >  NC_002947/5981435‑5981724

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.