New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 605007473 (1.120)5 (0.080) 4/256 NT 6.5% coding (936/2109 nt) spoT bifunctional (p)ppGpp synthase/hydrolase
?NC_002947 = 6050143 73 (1.160)coding (1005/2109 nt) spoT bifunctional (p)ppGpp synthase/hydrolase

GCATCATCGTCGACAAGGTTGACACCTGTTACCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGG  >  NC_002947/6049929‑6050222
                                                                                                                                                 |                                                                                                                                                     
gCATCATCGTCGACAAGGTTGACACCTGTTACCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATg                                                                                                                                                    >  8:126202/1‑149 (MQ=255)
           gACAAGGTTGACACCTGTTACCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGcc                                                                                                                                         >  4:47962/1‑149 (MQ=255)
           gACAAGGTTGACACCTGTTACCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGcc                                                                                                                                         <  4:221634/149‑1 (MQ=255)
              aaGGTTGACACCTGTTACCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCAt                                                                                                                                      >  8:132295/1‑149 (MQ=255)
              aaGGTTGACACCTGTTACCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCAt                                                                                                                                      <  6:156988/149‑1 (MQ=255)
               aGGTTGACACCTGTTACCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATc                                                                                                                                     <  7:334127/149‑1 (MQ=255)
                  ttGACACCTGTTACCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGaa                                                                                                                                  <  6:223722/149‑1 (MQ=255)
                  ttGACACCTGTTACCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGa                                                                                                                                   >  5:217129/1‑148 (MQ=255)
                    gACACCTGTTACCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCGAACGGCTACGAGTCGTTGCACACCACCCTGTTCGGC                                                                                                                                                       <  5:407417‑M1/126‑1 (MQ=255)
                    gACACCTGATACCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGTCTACCAGTCGTTGCACACCACCCTGTTCGGC                                                                                                                                                       >  6:407417‑M1/1‑126 (MQ=255)
                      cacCTGTTACCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATc                                                                                                                               <  8:140461/148‑1 (MQ=255)
                       acCTGTTACCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCgatgccgttgttggccatctcttcca                                                                                                                             >  7:99526‑M1/1‑123 (MQ=255)
                       acCTGTTACCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATc                                                                                                                               >  6:95455/1‑147 (MQ=255)
                          tGTTACCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGAt                                                                                                                          >  1:158255/1‑149 (MQ=255)
                            ttACCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTc                                                                                                                        <  6:383172/149‑1 (MQ=255)
                             tACCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTc                                                                                                                        <  3:47962/148‑1 (MQ=255)
                              aCCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGc                                                                                                                      >  2:220570/1‑149 (MQ=255)
                                       tCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGa                                                                                                              >  3:271980/1‑148 (MQ=255)
                                           cgacttACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAAt                                                                                                           <  1:354543/142‑1 (MQ=255)
                                             ccGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGaa                                                                                                       <  8:218011/149‑1 (MQ=255)
                                             ccGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTACACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGaa                                                                                                       <  8:382609/149‑1 (MQ=255)
                                             ccGTACACAACCTGTACAAGACGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGGTGGACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATgg                                                                                                         >  7:263274/1‑147 (MQ=255)
                                               gTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGt                                                                                                                                            <  6:57274/110‑1 (MQ=255)
                                               gTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGt                                                                                                                                            >  5:57274/1‑110 (MQ=255)
                                               gTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGaa                                                                                                       >  5:171425/1‑147 (MQ=255)
                                                     aaCCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGc                                                                                              >  1:11171/1‑149 (MQ=255)
                                                      aCCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGc                                                                                              >  6:60104/1‑148 (MQ=255)
                                                       ccTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGcc                                                                                             >  6:219057/1‑148 (MQ=255)
                                                       ccTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCca                                                                                            <  4:271980/149‑1 (MQ=255)
                                                       ccTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGACCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAt                                                                                                  <  6:206286/144‑1 (MQ=255)
                                                       ccTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGACCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAt                                                                                                  >  5:206286/1‑144 (MQ=255)
                                                             cAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCaacaac                                                                                       <  6:36113/148‑1 (MQ=255)
                                                              aaGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCgatgccgttgttggccatctcttccatttcgcgggtgcgaatctggatttcgatgggcacgccgt                                                                                      >  2:323865‑M1/1‑84 (MQ=255)
                                                              aaGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACgg                                                                                     <  6:122577/149‑1 (MQ=255)
                                                                     tGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCgcc                                                                              <  7:364327‑M2/149‑4 (MQ=255)
                                                                       cccGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGTCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCgcc                                                                              >  7:126202‑M2/1‑144 (MQ=255)
                                                                       cccGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCgcc                                                                              >  7:161128‑M2/1‑144 (MQ=255)
                                                                          ggACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCgatgccgttgttggccatctcttccatttcgcgggtgcgaatctggatttcgatgggcacgccgtgcatgccgaaca                                                                          <  8:99526‑M1/149‑78 (MQ=255)
                                                                          ggACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCa                                                                         >  1:302230/1‑149 (MQ=255)
                                                                           gACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCgatgccgttgttggccatctcttccatttcgcgggtgcgaatctggatttcgatgggcacgccgtgcatgccgaacag                                                                         <  1:323865‑M1/149‑79 (MQ=255)
                                                                           gACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCgatgccgttgttggccatctcttccatttcgcgggtgcgaatctggatttcgatgggcacgccgtgcatgccgaacag                                                                         <  7:81939‑M1/149‑79 (MQ=255)
                                                                             cGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTg                                                                      <  6:171425/149‑1 (MQ=255)
                                                                                ttCAAGGATTAGATGGCGATCCCCTCGGGATACGGCTACCAGTCCTTGCACACCACCCTGATCGGCATGCACGGCGTGCCCATCGAAATACATATTCTCACACGCGAAATGGATGAGATGGCCAACTTCTTCATCGCCGCGCACTGTCt                                                                   <  6:222156/149‑1 (MQ=255)
                                                                                ttCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTTTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGa                                                                                                        >  8:278065/1‑113 (MQ=255)
                                                                                ttCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGa                                                                                                        <  7:278065/113‑1 (MQ=255)
                                                                                ttCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCt                                                                   >  2:342403/1‑149 (MQ=255)
                                                                                  cAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCt                                                                   <  5:134207/147‑1 (MQ=255)
                                                                                  cAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTg                                                                  >  4:45075/1‑148 (MQ=255)
                                                                                   aaGGAGTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTa                                                                <  8:298442/149‑1 (MQ=255)
                                                                                      gATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACaa                                                             <  7:148083/149‑1 (MQ=255)
                                                                                       aTTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAg                                                            <  5:60104/149‑1 (MQ=255)
                                                                                          aCATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTc                                                          >  8:226757/1‑148 (MQ=255)
                                                                                          aCATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTc                                                          >  8:58275/1‑148 (MQ=255)
                                                                                             tCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAac                                                      >  5:390482/1‑149 (MQ=255)
                                                                                               gcgATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGATCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAacga                                                    >  1:286226/1‑149 (MQ=255)
                                                                                                cgATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAacgac                                                   <  5:219057/149‑1 (MQ=255)
                                                                                                 gATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAacgacg                                                  <  1:220570/149‑1 (MQ=255)
                                                                                                     cccAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCTTCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGTCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAAcgacgacga                                              >  2:115547/1‑149 (MQ=255)
                                                                                                      ccAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAacga                                                    <  7:182092/142‑1 (MQ=255)
                                                                                                      ccAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAacga                                                    >  8:182092/1‑142 (MQ=255)
                                                                                                      ccAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGag                                             >  4:296682/1‑149 (MQ=255)
                                                                                                      ccAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGag                                             >  6:368226/1‑149 (MQ=255)
                                                                                                       cAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATCAGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGag                                             <  1:99901/149‑1 (MQ=255)
                                                                                                       cAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGag                                             >  3:15449/1‑148 (MQ=255)
                                                                                                          ggCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGagcagc                                         <  6:217129/149‑1 (MQ=255)
                                                                                                                cGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGCCGAGCAGCCCAAgg                                   <  7:346006/149‑1 (MQ=255)
                                                                                                                cGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAgg                                   <  2:158255/149‑1 (MQ=255)
                                                                                                                cGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAgg                                   <  7:132295/149‑1 (MQ=255)
                                                                                                                   ctcccAGTCGTTGCGCGCCGCCCTGTTCGGCATGCCCGGCGTGGCCGTGGAAATCCAGATTCGCGCGCGCGAAATGGAAGAGATGGCCAACAACGGCGTCGCCGCGCAGTGGCTGTAGAGGTCAGAGGGCGGCGGGCAGCCCGGGGGcg                                >  2:372139/4‑148 (MQ=255)
                                                                                                                        aGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCAc                           >  5:56326/1‑149 (MQ=255)
                                                                                                                         gTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCAcg                          >  6:188958/1‑149 (MQ=255)
                                                                                                                               gCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGt                                                                 >  5:74657/1‑104 (MQ=255)
                                                                                                                               gCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGt                                                                 <  6:74657/104‑1 (MQ=255)
                                                                                                                                 acacCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGcgcc                  >  4:387163/1‑149 (MQ=255)
                                                                                                                                 acacCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGcgcc                  >  5:25100/1‑149 (MQ=255)
                                                                                                                                 acacCACCCTGTTCGGCATGCACGGCGTGCCCAACGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTAc                                                               >  7:76466/1‑104 (MQ=255)
                                                                                                                                 acacCACCCTGTTCGGCATGCACGGCGTGCCCAACGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTAc                                                               <  8:76466/104‑1 (MQ=255)
                                                                                                                                     caccCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGcgcc                  >  7:19316/1‑145 (MQ=255)
                                                                                                                                     caccCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGcgcc                  <  8:19316/145‑1 (MQ=255)
                                                                                                                                        ccTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGt           <  8:263274/149‑1 (MQ=255)
                                                                                                                                        ccTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGt           <  6:56326/149‑1 (MQ=255)
                                                                                                                                        ccTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGt           >  6:173000/1‑149 (MQ=255)
                                                                                                                                         cTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCgccgaacagggtggtgtgcaacgactggtagccgttggccttggggatcgcgatgtaatccttgaagcgtc          <  7:81939‑M2/149‑72 (MQ=255)
                                                                                                                                         cTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCgccgaacagggtggtgtgcaacgactggtagccgttggccttggggatcgcgatgtaatccttgaagcgtc          <  1:323865‑M2/149‑72 (MQ=255)
                                                                                                                                          tGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCgccgaacagggtggtgtgcaacgactggtagccgttggccttggggatcgcgatgtaatccttgaagcgtcc         <  8:99526‑M2/149‑73 (MQ=255)
                                                                                                                                            ttCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTgg         <  1:372139/147‑1 (MQ=255)
                                                                                                                                            ttCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTgg         <  7:226757/147‑1 (MQ=255)
                                                                                                                                               ggCgatgccgttgttggccatctcttccatttcgcgggtgcgaatctggatttcgatgggcacgccgtgcatgccgaacagggtggtgtgcaacgactggtagccgttggccttggggatcgcgatgtaatccttgaagcgtccgggca     <  7:364327‑M1/149‑147 (MQ=255)
                                                                                                                                               ggCgatgccgttgttggccatctcttccatttcgcgggtgcgaatctggatttcgatgggcacgccgtgcatgccgaacagggtggtgtgcaacgactggtagccgttggccttggggatcgcgatgtaatccttgaagcgtccggg       >  7:161128‑M1/1‑3 (MQ=255)
                                                                                                                                               ggCgatgccgttgttggccatctcttccatttcgcgggtgcgaatctggatttcgatggacacgccgtgcatgccgaacagggtggtgtgcaacgactggtagccgttggccttggggatcgcgatgtaatccttgaagcgtccggg       >  7:126202‑M1/1‑3 (MQ=255)
                                                                                                                                                gCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAg   <  5:295964/149‑1 (MQ=255)
                                                                                                                                                gCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAg   >  8:59502/1‑149 (MQ=255)
                                                                                                                                                gCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAg   <  2:11171/149‑1 (MQ=255)
                                                                                                                                                gCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAg   <  2:286226/149‑1 (MQ=255)
                                                                                                                                                gCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAg   >  6:37498/1‑149 (MQ=255)
                                                                                                                                                 cATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCACTCGCGCGCCCGCCAGTGGGTCAAgg  <  1:342403/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                     
GCATCATCGTCGACAAGGTTGACACCTGTTACCGCGTGCTCGGCGCCGTACACAACCTGTACAAGCCGCTGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATGGCCAACAACGGCATCGCCGCGCACTGGCTGTACAAGTCAAACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGG  >  NC_002947/6049929‑6050222

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.