New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6050074	73 (1.120)	5 (0.080)	4/256	NT	6.5%	coding (936/2109 nt)	spoT	bifunctional (p)ppGpp synthase/hydrolase
	?	NC_002947	= 6050143	73 (1.160)					coding (1005/2109 nt)	spoT	bifunctional (p)ppGpp synthase/hydrolase

TGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCGGCAACTCCCTGGAATTCATCGAGAGCGTGAAGATCGAC  >  NC_002947/6049998‑6050287                                                                                                                                                   |                                                                                                                                                      tGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCgcc                                                                                                                                                    <  7:364327‑M2/149‑4 (MQ=255)   cccGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGTCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCgcc                                                                                                                                                    >  7:126202‑M2/1‑144 (MQ=255)   cccGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCgcc                                                                                                                                                    >  7:161128‑M2/1‑144 (MQ=255)      ggACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCa                                                                                                                                               >  1:302230/1‑149 (MQ=255)         cGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTg                                                                                                                                            <  6:171425/149‑1 (MQ=255)            ttCAAGGATTAGATGGCGATCCCCTCGGGATACGGCTACCAGTCCTTGCACACCACCCTGATCGGCATGCACGGCGTGCCCATCGAAATACATATTCTCACACGCGAAATGGATGAGAT‑GGCCAACTTCTTCATCGCCGCGCACTGTCt                                                                                                                                         <  6:222156/149‑1 (MQ=255)            ttCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCt                                                                                                                                         >  2:342403/1‑149 (MQ=255)              cAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCt                                                                                                                                         <  5:134207/147‑1 (MQ=255)              cAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTg                                                                                                                                        >  4:45075/1‑148 (MQ=255)               aaGGAGTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTa                                                                                                                                      <  8:298442/149‑1 (MQ=255)                  gATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑Caa                                                                                                                                 <  7:148083/149‑1 (MQ=255)                   aTTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAg                                                                                                                                <  5:60104/149‑1 (MQ=255)                      aCATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTc                                                                                                                              >  8:226757/1‑148 (MQ=255)                      aCATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTc                                                                                                                              >  8:58275/1‑148 (MQ=255)                         tCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ac                                                                                                                       >  5:390482/1‑149 (MQ=255)                           gcgATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGATCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑acga                                                                                                                     >  1:286226/1‑149 (MQ=255)                            cgATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑acgac                                                                                                                    <  5:219057/149‑1 (MQ=255)                             gATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑acgacg                                                                                                                   <  1:220570/149‑1 (MQ=255)                                 cccAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCTTCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGTCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑Acgacgacga                                                                                                               >  2:115547/1‑149 (MQ=255)                                  ccAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑acga                                                                                                                     <  7:182092/142‑1 (MQ=255)                                  ccAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑acga                                                                                                                     >  8:182092/1‑142 (MQ=255)                                  ccAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGag                                                                                                              >  4:296682/1‑149 (MQ=255)                                  ccAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGag                                                                                                              >  6:368226/1‑149 (MQ=255)                                   cAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGATCAGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGag                                                                                                              <  1:99901/149‑1 (MQ=255)                                   cAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGag                                                                                                              >  3:15449/1‑148 (MQ=255)                                      ggCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGagcagc                                                                                                          <  6:217129/149‑1 (MQ=255)                                            cGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGCCGAGCAGCCCAAgg                                                                                                    <  7:346006/149‑1 (MQ=255)                                            cGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAgg                                                                                                    <  7:132295/149‑1 (MQ=255)                                            cGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAgg                                                                                                    <  2:158255/149‑1 (MQ=255)                                               ctcccAGTCGTTGCGCGCCGCCCTGTTCGGCATGCCCGGCGTGGCCGTGGAAATCCAGATTCGCGCGCGCGAAATGGAAGAGAT‑GGCCAACAACGGCGTCGCCGCGCAGTGGCTGTA‑‑GAGGTCA‑‑G‑AGGGCGGCGGGCAGCCCGGGGGcg                                                                                                 >  2:372139/4‑148 (MQ=255)                                                    aGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCAc                                                                                            >  5:56326/1‑149 (MQ=255)                                                     gTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCAcg                                                                                           >  6:188958/1‑149 (MQ=255)                                                           gCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGt                                                                                                                                       >  5:74657/1‑104 (MQ=255)                                                           gCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGt                                                                                                                                       <  6:74657/104‑1 (MQ=255)                                                             acacCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGcgcc                                                                                   >  4:387163/1‑149 (MQ=255)                                                             acacCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGcgcc                                                                                   >  5:25100/1‑149 (MQ=255)                                                             acacCACCCTGTTCGGCATGCACGGCGTGCCCAACGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑c                                                                                                                                   >  7:76466/1‑104 (MQ=255)                                                             acacCACCCTGTTCGGCATGCACGGCGTGCCCAACGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑c                                                                                                                                   <  8:76466/104‑1 (MQ=255)                                                                 caccCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGcgcc                                                                                   >  7:19316/1‑145 (MQ=255)                                                                 caccCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGcgcc                                                                                   <  8:19316/145‑1 (MQ=255)                                                                    ccTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGt                                                                            <  8:263274/149‑1 (MQ=255)                                                                    ccTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGt                                                                            <  6:56326/149‑1 (MQ=255)                                                                    ccTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGt                                                                            >  6:173000/1‑149 (MQ=255)                                                                     cTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCgccgaacagggtggtgtgcaacgactggtagccgttggccttggggatcgcgatgtaatccttgaagcgtc                                                                                <  1:323865‑M2/149‑72 (MQ=255)                                                                     cTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCgccgaacagggtggtgtgcaacgactggtagccgttggccttggggatcgcgatgtaatccttgaagcgtc                                                                                <  7:81939‑M2/149‑72 (MQ=255)                                                                      tGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCgccgaacagggtggtgtgcaacgactggtagccgttggccttggggatcgcgatgtaatccttgaagcgtcc                                                                               <  8:99526‑M2/149‑73 (MQ=255)                                                                        ttCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTgg                                                                          <  1:372139/147‑1 (MQ=255)                                                                        ttCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTgg                                                                          <  7:226757/147‑1 (MQ=255)                                                                            gCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAg                                                                    <  2:11171/149‑1 (MQ=255)                                                                            gCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAg                                                                    <  5:295964/149‑1 (MQ=255)                                                                            gCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAg                                                                    >  6:37498/1‑149 (MQ=255)                                                                            gCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAg                                                                    >  8:59502/1‑149 (MQ=255)                                                                            gCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAg                                                                    <  2:286226/149‑1 (MQ=255)                                                                             cATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACTCGCGCGCCCGCCAGTGGGTCAAgg                                                                   <  1:342403/149‑1 (MQ=255)                                                                               tGCACGGCGTGCCCTTCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGTCAACAACGGCATCGCCGCGCACTGGCTGTACTCTAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAgg                                                                   <  1:115547/149‑1 (MQ=255)                                                                                  aCGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCgccgaacagggtggtgtgcaacgactggtagccgttggccttggggatcgcgatgtaatccttgaagcgtccgggcagcggctt                                                                   >  2:323865‑M2/1‑65 (MQ=255)                                                                                     gCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCtt                                                           <  3:387163/149‑1 (MQ=255)                                                                                        tGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGATACCCTTGac                                                        <  6:390482/149‑2 (MQ=255)                                                                                            cATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTgc                                                    >  7:38927/1‑149 (MQ=255)                                                                                             aTCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACgcgcgcgc                                                                                    >  2:368303/1‑116 (MQ=255)                                                                                             aTCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACgcgcgcgc                                                                                    <  1:368303/116‑1 (MQ=255)                                                                                             aTCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTgca                                                   <  8:364327/149‑1 (MQ=255)                                                                                                  aaTCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAAc                                              >  5:254634/1‑149 (MQ=255)                                                                                                      cAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCAGTAGACGCCGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACg                                             >  1:329858/1‑149 (MQ=255)                                                                                                        gATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCg                                        >  2:273457/1‑149 (MQ=255)                                                                                                                  cgcgAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCGGCAACTCCCt                              <  5:95455/149‑1 (MQ=255)                                                                                                                   gcgAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCGGCAACTCCCTg                             <  3:296682/149‑1 (MQ=255)                                                                                                                         tGGAAGAGAT‑GGCCAACAACGGCATCgccgaacagggtggtgtgcaacgactggtagccgttggccttggggatcgcgatgtaatccttgaagcgtccgggcagcggcttgtacaggttgtgtacggcgccgagcacgcggtaacaggt                            >  7:99526‑M2/1‑26 (MQ=255)                                                                                                                         tGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCGGCAACTCCCTGGAATTc                       <  3:45075/149‑1 (MQ=255)                                                                                                                           gAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCGGCAACTCCCTGGAATTCAt                     >  4:357125/1‑149 (MQ=255)                                                                                                                           gAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCGGCAACTCCCTGGAATTCAt                     <  3:357125/149‑1 (MQ=255)                                                                                                                              gagaT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCGGCAACTCCCTGGAATTCATCga                  <  6:25100/149‑1 (MQ=255)                                                                                                                               agaT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCGGCAACTCCCTGGAATTCATCgag                 <  6:254634/149‑1 (MQ=255)                                                                                                                                gaT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTT‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCGGCAACTCCCTGGAATTCATCgaga                <  1:365714/149‑1 (MQ=255)                                                                                                                                 aT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCGGCAACTCCCTGGAATTCATCGagag               <  1:273457/149‑1 (MQ=255)                                                                                                                                     gCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAACCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCGGCAACTCCCTGGAATTCATCGAGAGCGt            >  1:308933/1‑149 (MQ=255)                                                                                                                                      ccAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCGGCAACTCCCTGGAATTCATCGAGAGCGt            >  5:37194/1‑148 (MQ=255)                                                                                                                                       caacaaCGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCATCAACGTGCCGGCAACTCACTGGAATTCATCGAGAGCGTGa          <  7:59502/149‑1 (MQ=255)                                                                                                                                       caacaaCGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCGGCAACTCCCTGGAATTCATCGAGAGCGTg           >  3:302212/1‑148 (MQ=255)                                                                                                                                        aacaacGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCGGCAACTCCCTGGAATTCATCGAGAGCGTGaa         <  8:38927/149‑1 (MQ=255)                                                                                                                                             cGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCGGCAACTCCCTGGAATTCATCGAGAGCGt            >  8:105205/1‑141 (MQ=255)                                                                                                                                             cGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCGGCAACTCCCTGGAATTCATCGAGAGCGt            <  7:105205/141‑1 (MQ=255)                                                                                                                                               gCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCGGCAACTCCCTGGAATTCATCGAGAGCGTGAAGATCGAc  <  2:308933/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                      TGCCCGGACGCTTCAAGGATTACATCGCGATCCCCAAGGCCAACGGCTACCAGTCGTTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAAATCCAGATTCGCACCCGCGAAATGGAAGAGAT‑GGCCAACAACGGCATCGCCGCGCACTGGCTGTA‑‑CAAGTCA‑‑A‑ACGACGACGAGCAGCCCAAGGGCAGCCACGCGCGCGCCCGCCAGTGGGTCAAGGGTATCCTTGAACTGCAGCAACGTGCCGGCAACTCCCTGGAATTCATCGAGAGCGTGAAGATCGAC  >  NC_002947/6049998‑6050287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.