New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 49702390 (1.380)5 (0.080) 5/248 NT 5.3% coding (895/2388 nt) PP_0409 two‑component system sensor histidine kinase
?NC_002947 = 497096 93 (1.520)coding (968/2388 nt) PP_0409 two‑component system sensor histidine kinase

Only 100 of 114 total aligned reads displayed.

GGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGCTGGAGCGGCCGCTAAGC  >  NC_002947/496948‑497244
                                                                                                                                                       |                                                                                                                                                    
ggCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAaga                                                                                                                                                      <  8:233322/149‑1 (MQ=255)
   ttCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAggc                                                                                                                                                   <  5:54705‑M2/149‑4 (MQ=255)
   ttCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGAGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAggc                                                                                                                                                   <  3:204366‑M2/149‑4 (MQ=255)
    tCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAggc                                                                                                                                                   >  4:204366‑M2/1‑145 (MQ=255)
     ntgGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAggcgt                                                                                                                                                 <  2:206197‑M2/148‑6 (MQ=255)
      tGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAggcgtt                                                                                                                                                <  2:216178‑M2/149‑7 (MQ=255)
        gCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAggcgttgc                                                                                                                                              <  4:182370‑M2/149‑9 (MQ=255)
         cAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCg                                                                                                                                             <  2:176550/149‑1 (MQ=255)
          aGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCgg                                                                                                                                            >  2:93862/1‑149 (MQ=255)
           gAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGc                                                                                                                                           <  3:80230/149‑1 (MQ=255)
              cATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGa                                                                                                                                        <  2:156035/149‑1 (MQ=255)
              cATGGCCTTGTTGTGCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGa                                                                                                                                        <  8:379587/149‑1 (MQ=255)
                tGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGc                                                                                                                                      <  8:284302/149‑1 (MQ=255)
                tGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGc                                                                                                                                      <  6:13702/149‑1 (MQ=255)
                    cTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGt                                                                                                                                  >  5:174342/1‑149 (MQ=255)
                        ttgttCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCg                                                                                                                               <  3:50849/148‑1 (MQ=255)
                           ttCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCa                                                                                                                            <  1:337166/148‑1 (MQ=255)
                           ttCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCAt                                                                                                                           <  2:272710/149‑1 (MQ=255)
                           ttCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCAt                                                                                                                           >  5:259288/1‑149 (MQ=255)
                                  tgttgctgttgTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGAt                                                                                                                       >  6:335283/1‑146 (MQ=255)
                                     tgctgttgTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCagag                                                                                                                  >  5:365871/1‑148 (MQ=255)
                                            gtgtgCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑CTGC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGt                                                                                                            <  1:93862/148‑1 (MQ=255)
                                            gtgtgCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAG‑CAGTTCGCCATCGATCAGAGCACCGTgg                                                                                                          <  3:182370/148‑1 (MQ=255)
                                             tgtgCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTggg                                                                                                         >  5:85720/1‑149 (MQ=255)
                                             tgtgCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTgg                                                                                                          <  6:174342/148‑1 (MQ=255)
                                             tgtgCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTgg                                                                                                          <  1:206197/148‑1 (MQ=255)
                                             tgtgCCTTGGCCACGCTGGAGTGGCAACGCCGTCAGCACCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGACCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTgg                                                                                                          <  8:204401/148‑1 (MQ=255)
                                             tgtgCCTTGGCCACGCTGATGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTgg                                                                                                          <  6:408493/148‑1 (MQ=255)
                                                gCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTAt                                                                                                      >  4:328573/1‑149 (MQ=255)
                                                 ccTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGt                                                                                                        <  6:234358/146‑1 (MQ=255)
                                                 ccTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGt                                                                                                        >  5:234358/1‑146 (MQ=255)
                                                 ccTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATc                                                                                                     <  1:10389/149‑1 (MQ=255)
                                                   ttGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTgg                                                                                                          >  6:289521/1‑142 (MQ=255)
                                                   ttGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCct                                                                                                   >  5:210001/1‑149 (MQ=255)
                                                        cACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTAGCCATCGATCAGAGCACCGTGGGTATCCTCTggg                                                                                              >  8:3104/1‑149 (MQ=255)
                                                        cACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑AAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTggg                                                                                              >  5:392738/1‑149 (MQ=255)
                                                         aCGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGt                                                                                             >  2:378427/1‑149 (MQ=255)
                                                           gCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTc                                                                                            >  4:326754/1‑148 (MQ=255)
                                                               gtgtGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAggcgttgccaccccagcgtgggcaaggcacacaacagcaacagaccgaacaacaaggccatgt                                                                                       <  5:354939‑M2/149‑64 (MQ=255)
                                                                tgtgGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTgg                                                                                      <  7:284959/149‑1 (MQ=255)
                                                                tgtgGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTgg                                                                                      >  7:258074/1‑149 (MQ=255)
                                                                tgtgGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTgg                                                                                      <  1:108315/149‑1 (MQ=255)
                                                                cgttctaaCGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTgg                                                                                      <  5:221300/143‑1 (MQ=255)
                                                                 gtgGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGt                                                                                                        >  3:194159/1‑130 (MQ=255)
                                                                 gtgGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGt                                                                                                        <  4:194159/130‑1 (MQ=255)
                                                                 gtgGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTgg                                                                                      >  2:82408/1‑148 (MQ=255)
                                                                 gtgGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTgg                                                                                      >  3:311599/1‑148 (MQ=255)
                                                                 gtgGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTgg                                                                                      >  6:369526/1‑148 (MQ=255)
                                                                  tgGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAggcgttgccacaccagcgtggccaaggcacacaacagcaacagaccgaacaacaaggccatgttct                                                                                    <  5:259683‑M2/149‑67 (MQ=255)
                                                                  tgGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGCGTCAACTGGGa                                                                                    >  6:77454/1‑149 (MQ=255)
                                                                    gCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAggcgttgccacaccagcgtggccaaggcacacaacagcaacagaccgaacaacaaggccatgttctgc                                                                                  <  8:21203‑M2/149‑69 (MQ=255)
                                                                    gCAACGCAGTCAGCAGCGCCAGCTCCAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGCGCGCCAGGTG‑C‑CC‑GAAGCGCCGTTGCGGCTGAGCCACTACGCCATCGATCAGACCACCGTGGGTATCCACAGCGTCAACTCGGa                                                                                    >  8:164508/1‑147 (MQ=255)
                                                                       aCGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTggg                                                                                                         <  3:380458/123‑1 (MQ=255)
                                                                       aCGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTggg                                                                                                         >  4:380458/1‑123 (MQ=255)
                                                                           cGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCAtgt                                                                           <  6:259288/149‑1 (MQ=255)
                                                                              cagcagCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCg                                                                        >  5:30660/1‑149 (MQ=255)
                                                                               agcagcGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGt                                                                       >  4:215319/1‑149 (MQ=255)
                                                                                 cagcGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCAt                                                                             <  8:338880/141‑1 (MQ=255)
                                                                                 cagcGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCAt                                                                             >  7:338880/1‑141 (MQ=255)
                                                                                 cagcGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTa                                                                     >  2:219457/1‑149 (MQ=255)
                                                                                  agcGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTAc                                                                    >  7:351760/1‑149 (MQ=255)
                                                                                  agcGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTAc                                                                    <  6:210001/149‑1 (MQ=255)
                                                                                     gcCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGcc                                                                 <  3:215319/149‑1 (MQ=255)
                                                                                     gcCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGc                                                                  >  6:78673/1‑148 (MQ=255)
                                                                                      ccAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCa                                                                <  5:78673/149‑1 (MQ=255)
                                                                                        aGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTAAGCCAAc                                                              >  7:366748/1‑149 (MQ=255)
                                                                                         gCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAAc                                                              >  3:161388/1‑148 (MQ=255)
                                                                                           tGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAAcatg                                                           >  3:255890/1‑146 (MQ=255)
                                                                                           tGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCAt                                                           >  5:330331/1‑149 (MQ=255)
                                                                                                       tGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAgcg                                                >  6:409520/1‑148 (MQ=255)
                                                                                                        gTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGAGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCa                                              >  6:338273/1‑149 (MQ=255)
                                                                                                        gTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGCTGGC‑GCTGCTGAcggcgttgccacaccagcgtggccaaggcacacaacagcaacagaccgaacaacaaggccatgttctgccagaagcccggcgactcgctcaggcgcgggtat                                                <  8:243616‑M2/149‑103 (MQ=255)
                                                                                                            gCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGtt                                          >  2:404398/1‑149 (MQ=255)
                                                                                                            gCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGtt                                          <  3:328573/149‑1 (MQ=255)
                                                                                                            gCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGtt                                          >  4:342074/1‑149 (MQ=255)
                                                                                                             ccGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTg                                         <  3:81880/149‑1 (MQ=255)
                                                                                                              cgcgcgAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAggcgttgccacaccagcgtggccaaggcacacaacagcaacagaccgaacaacaaggccatgttctgccagaagcccggcgactcgctcaggcgcgggtatttcggctgc                                        >  6:259683‑M2/1‑39 (MQ=255)
                                                                                                              cgcgcgAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTgg                                        <  5:335283/149‑1 (MQ=255)
                                                                                                               gcgcgAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTggg                                       <  5:338273/149‑1 (MQ=255)
                                                                                                               gcgcgAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTggg                                       >  8:307181/1‑149 (MQ=255)
                                                                                                               gcgcgAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTggg                                       <  4:161388/149‑1 (MQ=255)
                                                                                                                atcgAGAAAGCCTTTTTGAGCGCCAGGTT‑A‑GC‑GAAGATGAGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGACATTTGCGTTAAGCAAACAATGCCGCTGAGCGCATGTTGGGc                                      >  4:4895/3‑149 (MQ=255)
                                                                                                                  cgAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTa                                    <  8:351760/149‑1 (MQ=255)
                                                                                                                   gagaAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTAc                                   <  5:369526/149‑1 (MQ=255)
                                                                                                                   gagaAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTAc                                   <  1:405526/149‑1 (MQ=255)
                                                                                                                           cTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAgg                           <  1:216178/149‑1 (MQ=255)
                                                                                                                           cTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAgg                           >  5:192460/1‑149 (MQ=255)
                                                                                                                              gttgAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAgggg                         <  7:307181/148‑1 (MQ=255)
                                                                                                                                  tgcggCAGGGG‑C‑GC‑GTAGAGGCTTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGGGGGTAGCCGCTGGGGCAACTGGGACAGCCATGGGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGtt                     <  7:164508/147‑1 (MQ=255)
                                                                                                                                  aGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACa                                  <  8:133829/135‑1 (MQ=255)
                                                                                                                                  aGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACa                                  >  7:133829/1‑135 (MQ=255)
                                                                                                                                   gcgcCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGc                   >  1:398026/1‑149 (MQ=255)
                                                                                                                                    cgcCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGATCACCGTGGGTTTCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGGCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAATGGGCGTTGCt                  <  5:77454/149‑1 (MQ=255)
                                                                                                                                        aGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGCTGGAg              >  4:50494/1‑149 (MQ=255)
                                                                                                                                         ggTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGCTGGAGc             <  7:94781/149‑1 (MQ=255)
                                                                                                                                         ggTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGCTGGAGc             <  7:3104/149‑1 (MQ=255)
                                                                                                                                            g‑c‑gc‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGCTGGAGCGGc          <  6:30660/149‑1 (MQ=255)
                                                                                                                                                    aaGAGGCGGTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGCTGGAGCGGCCGCTa     <  8:364120/149‑1 (MQ=255)
                                                                                                                                                       agGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGCTGGAGCGGCCGCTAAGc  <  3:342074/149‑1 (MQ=255)
                                                                                                                                                       agGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGCTGGAGCGGCCGCTAAGc  <  1:219457/149‑1 (MQ=255)
                                                                                                                                                       |                                                                                                                                                    
GGCTTCTGGCAGAACATGGCCTTGTTGTTCGGTCTGTTGCTGTTGTGTGCCTTGGCCACGCTGGTGTGGCAACGCCGTCAGCAGCGCCAGCTGGAGCGCAGCCTGTTGGCCGCGCGAGAAAGCCTTGTTGAGCGCCAGGTG‑C‑GC‑GAAGAGGCGTTGCGGCTGAGCCAGTTCGCCATCGATCAGAGCACCGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCCGCCGAGCGCATGTTGGGCTACAGCGAAGGGGCGTTGCTGGAGCGGCCGCTAAGC  >  NC_002947/496948‑497244

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.