New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3973644	51 (0.780)	3 (0.050)	3/248	NT	5.2%	coding (829/1326 nt)	PP_3503	sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 3973680	62 (1.010)					coding (793/1326 nt)	PP_3503	sigma‑54 dependent transcriptional regulator

CCGGTCGCGCAACGGCGCGGTCACCACCTGCAAGACGTTCAGGCGGTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGG  >  NC_002947/3973537‑3973826                                                                                                                                                  |                                                                                                                                                   cctgTCGCGCAACGGCGCGGTCACCACCTGCAAGACGTTCAGGCGGTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGccac                                                                                                                                               <  7:288790/146‑1 (MQ=255) ccGGTCGCGCAACGGCGCGGTCACCACCTGCAAGACGTTCAGGCGGTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTgcca                                                                                                                                                >  3:229540‑M2/1‑144 (MQ=255) ccGGTCGCGCAACGGCGCGGTCACCACCTGCAAGACGTTCAGGCGGTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTgcca                                                                                                                                                >  1:225734‑M2/1‑144 (MQ=255)  cGGTCGCGCAACGGCGCGGTCACCACCTGCAAGACGTTCAGGCGGTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTgccacc                                                                                                                                              >  8:142898‑M2/1‑143 (MQ=255)          cAACGGCGCGGTCACCACCTGCAAGACGTTCAGGCGGTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCt                                                                                                                                      <  5:147678/149‑1 (MQ=255)            aCGGCGCGGTCACCACCTGCAAGACGTTCAGGCGGTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCg                                                                                                                                    <  4:324087/149‑1 (MQ=255)                cgcgGTCACCACCTGCAAGACGTTCAGGCGGTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCAGCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGAtgt                                                                                                                                <  5:401147/149‑1 (MQ=255)                     tCACCACCTGCAAGACGTTCAGGCGGTAATACAGGTCTTCGC‑GGAATACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGATgccaccca                                                                                                                                            <  1:293935‑M2/133‑9 (MQ=255)                     tCACCACCTGCAAGACGTTCAGGCGGTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTgccaccca                                                                                                                                            >  2:293935‑M2/1‑124 (MQ=255)                        ccaccTGCAAGACGTTCAGGCGGTAATACAGGTCTTCGC‑GCAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTcc                                                                                                                        >  6:124379/1‑149 (MQ=255)                         caccTGCAAGACGTTCAGGCGGTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCt                                                                                                                       >  1:350630/1‑149 (MQ=255)                         caccTGCAAGACGTTCAGGCGGTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGACGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCt                                                                                                                       >  8:197821/1‑149 (MQ=255)                          accTGCAAGACGTTCAGGCGGTAATACAGGTCTTCGCTGGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCt                                                                                                                       >  1:276946/1‑149 (MQ=255)                          accTGCAAGACGTTCAGGCGGTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTg                                                                                                                      >  4:33132/1‑149 (MQ=255)                               cAAGACGTTCAGGCGGTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCaa                                                                                                                   <  3:33132/147‑1 (MQ=255)                                aaGACGTTCAGGCGGTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGa                                                                                                                 >  3:208950/1‑148 (MQ=255)                                     gTTCAGGCGGTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACgca                                                                                                           <  7:95537/149‑1 (MQ=255)                                          ggCGGTATTACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCaa                                                                                                                   >  4:251587/1‑136 (MQ=255)                                          ggCGGTATTACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCaa                                                                                                                   <  3:251587/136‑1 (MQ=255)                                           gCGGTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCaa                                                                                                                   >  2:233100/1‑135 (MQ=255)                                           gCGGTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCaa                                                                                                                   <  1:233100/135‑1 (MQ=255)                                             ggTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTg                                                                                                   <  5:247282/149‑1 (MQ=255)                                             ggTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTg                                                                                                   >  7:166482/1‑149 (MQ=255)                                               tAATACAGGTCTTCGC‑GCAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGc                                                                                                 <  5:124379/149‑1 (MQ=255)                                                aaTACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGcc                                                                                                >  6:312344/1‑149 (MQ=255)                                                   aCAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGc                                                                                                                              <  1:201774/116‑1 (MQ=255)                                                   aCAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGc                                                                                                                              >  2:201774/1‑116 (MQ=255)                                                   aCAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCt                                                                                               <  6:285583/147‑1 (MQ=255)                                                   aCAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCt                                                                                               >  5:285583/1‑147 (MQ=255)                                                   aCAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTg                                                                                              >  5:54168/1‑148 (MQ=255)                                                     aGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCaa                                                                                           >  3:313511/1‑149 (MQ=255)                                                                ggAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAAtt                                                                                         >  8:378355/1‑141 (MQ=255)                                                                ggAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAAtt                                                                                         <  7:378355/141‑1 (MQ=255)                                                                       gCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGTACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCg                                                                           >  2:355808/1‑149 (MQ=255)                                                                           ttGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGa                                                                       >  1:280187/1‑149 (MQ=255)                                                                               tCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGAttt                                                                    >  4:186357/1‑148 (MQ=255)                                                                               tCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGAttt                                                                    >  8:288480/1‑148 (MQ=255)                                                                                 gATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCGCCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTtc                                                                   <  2:219908/147‑1 (MQ=255)                                                                                 gATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTtcat                                                                 >  2:356340/1‑149 (MQ=255)                                                                                 gATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTtc                                                                   <  4:313511/147‑1 (MQ=255)                                                                                     gCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAg                                                             <  7:288480/149‑1 (MQ=255)                                                                                      cccGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAg                                                             >  2:261866/1‑148 (MQ=255)                                                                                      cccGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGAAGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAg                                                             >  4:227393/1‑148 (MQ=255)                                                                                       ccGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGa                                                            >  2:377472/1‑148 (MQ=255)                                                                                       ccGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGa                                                            >  7:114291/1‑148 (MQ=255)                                                                                             aaGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAAt                                                      <  8:166482/148‑1 (MQ=255)                                                                                                 tCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTgcc                                                 <  5:239655/149‑1 (MQ=255)                                                                                                   cacaTGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTgccgc                                               >  7:71613/1‑149 (MQ=255)                                                                                                      aTGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTgccacccatgtggaccttgagcgggccatcgagcaagggcgtttccgcgaagacctgtattaccgcctgaacgtcttgcaggtg                                                                >  5:143948‑M2/1‑45 (MQ=255)                                                                                                      aTGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTgccacccatgtggaccttgagcgggccatcgagcaagggcgtttccgcgaagacctgtattaccgcctgaacgtcttgcaggtg                                                                <  6:143948‑M2/129‑85 (MQ=255)                                                                                                          gTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTgccacccatgtggaccttgagcgggccatcgagcaagggcgtttccgcgaagacctgtattaccgcctgaacgtcttgcaggtggtgaccgcgccgttgcgcgaccgg                                        <  2:220013‑M2/149‑109 (MQ=255)                                                                                                           tGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGcc                                       >  3:100524/1‑149 (MQ=255)                                                                                                                 ccAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCg                                 <  2:280187/149‑1 (MQ=255)                                                                                                                  cAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGa                                <  1:261866/149‑1 (MQ=255)                                                                                                                       cccGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGc                           <  8:71613/149‑1 (MQ=255)                                                                                                                       cccGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGc                           >  7:167192/1‑149 (MQ=255)                                                                                                                        ccGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACgc                                                                                                            >  6:36729/1‑67 (MQ=255)                                                                                                                        ccGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACgc                                                                                                            <  5:36729/67‑1 (MQ=255)                                                                                                                        ccGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAAAGTGCCGCCATCGGCCGCTTCGATACGcc                          >  3:70469/1‑149 (MQ=255)                                                                                                                            aCATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCg                                 >  7:152950/1‑138 (MQ=255)                                                                                                                            aCATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCg                                 <  8:152950/138‑1 (MQ=255)                                                                                                                                ccACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTg                                                                                                   >  5:215347/1‑68 (MQ=255)                                                                                                                                ccACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTg                                                                                                   <  6:215347/68‑1 (MQ=255)                                                                                                                                  aCCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTgcg                <  8:114291/149‑1 (MQ=255)                                                                                                                                      gTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCtt                                   >  1:308077/1‑126 (MQ=255)                                                                                                                                      gTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCtt                                   <  2:308077/126‑1 (MQ=255)                                                                                                                                       tATGGGCTGGCTGCCACCCACCCGCTCGAAGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGt           <  3:227393/149‑1 (MQ=255)                                                                                                                                          gggCCGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCAGGTGAg        >  1:140542/1‑149 (MQ=255)                                                                                                                                           ggctggctGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAg        <  1:355808/148‑1 (MQ=255)                                                                                                                                             ctggctgCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCAc     <  2:350630/149‑1 (MQ=255)                                                                                                                                             ctggctgCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCAc     <  6:54168/149‑1 (MQ=255)                                                                                                                                                gctgCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCgg  <  4:208950/149‑1 (MQ=255)                                                                                                                                                gctgCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCgg  >  6:232436/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                   CCGGTCGCGCAACGGCGCGGTCACCACCTGCAAGACGTTCAGGCGGTAATACAGGTCTTCGC‑GGAA‑ACGCCCTTGCTCGATGGCCCGCTCAAGGTCCACATGGGTGGCCGCCAGCACCCGTACATCCACCGGTATGGGCTGGCTGCCACCCACCCGCTCGATGTGCTTCTCCTGCAAGAAACGCAGCAAGTTGGCCTGCAATTCCAACGGCAGGTCGCCGATTTCATCAAGAAACAATGTGCCGCCATCGGCCGCTTCGATACGCCCGGTCTTGCGCTGGTGAGCACCGG  >  NC_002947/3973537‑3973826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.