| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4111640 = | 46 (0.710) | 4 (0.060) | 4/250 | NT | 9.5% | coding (469/897 nt) | PP_3617 | membrane protein |
| ? | NC_002947 | 4111713 = | 33 (0.540) | coding (542/897 nt) | PP_3617 | membrane protein | |||||
GGCGGTGGTATTTTTAAGCGTACGGAATACGGCGGCTCATCATTCAGCACCAGCTATGCCCTCGCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGC > NC_002947/4111565‑4111852 | ggcggTGGTATTTTTAAGCGTACGGAATACGGCGGCTCATCATTCAGCACCAGCTATGCCCTCGCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGt > 1:200591/1‑149 (MQ=255) ggtggtATTTTTAAGCGTACGGAATACGGCGGCTCATCATTCAGCACCAGCTATGCCCTCGCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCaa < 5:282144/149‑1 (MQ=255) gcggggggagtttgtccgggccgtggtccatgaagtggcggaggtattcccatacctcggcgacatgcttgaCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCaa > 5:117309‑M1/73‑149 (MQ=255) cggggggagtttgtccgggccgtggtccatgaagtggcggaggtattcccatacctcggcgacatgcttgaCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAg > 1:234548‑M1/72‑149 (MQ=255) gtATTTTTAAGCGTACGCATTACGGCGTCTCATCATTCAGAACCAGCTATGCCCTCGCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCAt < 7:194393/149‑1 (MQ=255) tttttAAGCGTACGGAATACGGCGGCTCATCATTCAGCACCAGCTATGCCCTCGCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGt < 1:256194/148‑1 (MQ=255) tttttAAGCGTACGGAATACGGCGGCTCATCATTCAGCACCAGCTATGCCCTCGACTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTc > 7:167438/1‑149 (MQ=255) aaGCGTACGGAATACGGCGGCTCATCATTCAGCACCAGCTATGCCCTCGCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGcc > 3:138950/1‑147 (MQ=255) aGCGTACGGAATACGGCGGCTCATCATTCAGCACCAGCTATGCCCTCGCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGACCCCGGCGTCAAGCATGTCGCCGa < 3:172876/148‑1 (MQ=255) aGCGTACGGAATACGGCGGCTCATCATTCAGCACCAGCTATGCCCTCGCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGa < 7:326009/148‑1 (MQ=255) aGCGTACGGAATACGGCGGCTCATCATTCAGCACCAGCTATGCCCTCGCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAg < 5:150606/149‑1 (MQ=255) gAATACGGCGGCTCATCATTCAGCACCAGCTATGCCCTCGCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGa < 4:138950/149‑1 (MQ=255) cggcggCTCATCATTCAGCACCAGCTATGCCCTCGCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATAcc > 4:113867/1‑149 (MQ=255) tcatcaTTCAGCACCAGCTATGCCCTCGCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCg < 2:190544/124‑1 (MQ=37) tcatcaTTCAGCACCAGCTATGCCCTCGCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCg > 1:190544/1‑124 (MQ=37) atcatTCAGCACCAGCTATGCCCTCCCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCAc < 6:17367/148‑1 (MQ=255) atTCAGCACCAGCTATGCCCTCGCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCa < 2:200591/149‑1 (MQ=38) ttCAGCACCAGCTATGCCCTCGCCTTCGCCCCCCGCAGGGAAGACTGGAGCCTGCATCAAAAAGACTGCGTCTGGGTCGACAGTAACGAACCCACCGAACCCGGGGTCAAGCATGTCGCCGAGGTATGGGAATACGTCCGCCACTTCAt < 8:359797/149‑1 (MQ=11) gCACCAGCTATGCCCTCGCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGAc < 3:403849/149‑1 (MQ=35) ccTCGCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGAc > 1:280179/1‑148 (MQ=37) ccTCGCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGAc > 8:324033/1‑148 (MQ=37) ttCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTccc > 5:389395/1‑149 (MQ=37) gCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTcccccc > 8:149795/1‑149 (MQ=39) cttgacgccgggttcggtgggttcgttactgtcgacccagaggcagtctttttgatgcaggctgccgtcttcccggcgTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCcccg > 1:234548‑M2/79‑149 (MQ=255) ttgacgccgggttcggtgggttcgttactgtcgacccagaggcagtctttttgatgcaggctgccgtcttcccggcgTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCcccgc > 5:117309‑M2/78‑149 (MQ=255) cccGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCcccgccc > 3:140973/1‑149 (MQ=39) cccGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCcccgccc < 6:389395/149‑1 (MQ=39) CGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCgg > 7:324033‑M1/1‑149 (MQ=255) ggCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGCACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACtg > 1:312145/1‑149 (MQ=37) aGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACtggtg < 8:167438/149‑1 (MQ=37) gttactgtcgacccagaggcagtctttttgatgcaggctgccgtcttcccggcgTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGcac < 6:117309‑M2/95‑1 (MQ=255) ctctGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCCCTGCACGCCAt > 7:203637/1‑149 (MQ=21) tGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCcccgccc < 6:305697/108‑1 (MQ=35) tGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCcccgccc > 5:305697/1‑108 (MQ=35) cAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGAccc > 7:249110/1‑149 (MQ=34) aGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGCACCCAACTGGTGGCCCAAGCCACTGCACGCCATCTGCCTGAcccc > 3:210441/1‑149 (MQ=21) aaCGAACCCACCGAACCCGGCGTCAAGCATGGCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCgg < 3:299258/148‑1 (MQ=21) caggctgccgtcttcccggcgTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGc < 2:234548‑M2/127‑1 (MQ=255) aCGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCa < 4:140973/149‑1 (MQ=34) aCCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAg < 3:113867/149‑1 (MQ=34) aCCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCCACTGGTGGGACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTg > 6:290853/1‑149 (MQ=21) aCCGAACCCGACGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTg > 7:151416/1‑149 (MQ=21) aaCCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGgcgc < 2:312145/149‑1 (MQ=34) | GGCGGTGGTATTTTTAAGCGTACGGAATACGGCGGCTCATCATTCAGCACCAGCTATGCCCTCGCCTTCGCCCCCCGCCGGGAAGACGGCAGCCTGCATCAAAAAGACTGCCTCTGGGTCGACAGTAACGAACCCACCGAACCCGGCGTCAAGCATGTCGCCGAGGTATGGGAATACCTCCGCCACTTCATGGACCACGGCCCGGACAAACTCCCCCCGCCCGGTGAACCCAACTGGTGGCACAAGCCACTGCACGCCATCTGCCTGACCCCGGCAGAAGCCTGGCGC > NC_002947/4111565‑4111852 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |