New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 544267852 (0.800)3 (0.050) 3/254 NT 5.2% intergenic (‑95/+113) PP_4780/PP_4781 acyl‑CoA dehydrogenase/sensor histidine kinase
?NC_002947 = 5442726 60 (0.960)intergenic (‑143/+65) PP_4780/PP_4781 acyl‑CoA dehydrogenase/sensor histidine kinase

CTCATCGGGGGGCTCCTGGATCCGGGTAGGCTTGAGAGACCCAGTGAAGCACTGCTTGCGGGGTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGCGAAATCGCCATGTTCAAACTCAACTCGAAGCGG  >  NC_002947/5442579‑5442872
                                                                                                                                                   |                                                                                                                                                  
cTCATCGGGGGGCTCCTGGATCCGGGTAGGCTTGAGAGACCCAGTGAAGCACTGCTTGCGGGGTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGg                                                                                                                                                   >  8:36705‑M2/1‑148 (MQ=255)
 tCATCGGGGGGCTCCTGGATCCGGGTAGGCTTGAGAGACCCAGTGAAGCACTGCTTGCGGGGTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGg                                                                                                                                                   <  8:51448‑M2/148‑2 (MQ=255)
 tCATCGGGGGGCTCCTGGATCCGGGTAGGCTTGAGAGACCCAGTGAAGCACTGCTTGCGGGGTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGg                                                                                                                                                   <  6:406443‑M2/148‑2 (MQ=255)
   aTCGGGGGGCTCCTGGATCCGGGTAGGCTTGAGAGACCCAGTGAAGCACTGCTTGCGGGGTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGgcaa                                                                                                                                                <  4:362010‑M2/149‑5 (MQ=255)
        ggggCTCCTGGATCCGGGTAGGCTTGAGAGACCCAGTGAAGCACTGCTTGCGGGGTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCaacggt                                                                                                                                            >  2:206542/1‑148 (MQ=255)
           gCTCCTGGATCCGGGTAGGCTTGAGAGACGCAGTGAAGCACTGCTTGCGGGGTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCaacggtgaac                                                                                                                                        <  7:299300/149‑1 (MQ=255)
             tCCTGGATCCGGGTAGGCTTGAGAGACCCAGTGAAGCACTGCTTGCGGGGTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCaacggtgaacgg                                                                                                                                      >  4:305872/1‑149 (MQ=255)
                  gATCCGGGTAGGCTTGAGAGACCCAGTGAAGCACTGCTTGCGGGGTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACggtgggt                                                                                                                                 <  5:406443/149‑1 (MQ=255)
                  gATCCGGGTAGGCTTGAGAGACCCAGTGAAGCACTGCTTGCGGGGTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACggtgggt                                                                                                                                 >  7:49339/1‑149 (MQ=255)
                       gggTAGGCTTGAGAGACCCAGTGAAGCACTGCTTGCGGGGTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGata                                                                                                                            <  7:51448/149‑1 (MQ=255)
                         gTAGGCTTGAGAGACCCAGTGAAGCACTGCTTGCGGGGTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATAtt                                                                                                                          >  3:158906/1‑149 (MQ=255)
                          tAGGCTTGAGAGACCCAGTGAAGCACTGCTTGCGGGGTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTg                                                                                                                         <  8:49339/149‑1 (MQ=255)
                               ttGAGAGACCCAGTGAAGCACTGCTTGCGGGGTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCcag                                                                                                                    >  7:113604/1‑149 (MQ=255)
                               ttGAGAGACCCAGTGAAGCACTGCTTGCGGGGGAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCcag                                                                                                                    >  5:313675/1‑149 (MQ=255)
                                    agaCCCAGTGAAGCACTGCTTGCGGGGTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCcag                                                                                                                    >  4:130291/1‑144 (MQ=255)
                                    agaCCCAGTGAAGCACTGCTTGCGGGGTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCcag                                                                                                                    <  3:130291/144‑1 (MQ=255)
                                     gaCCCAGTGAAGGACTGCTTGCGGGGTAGTCAAATGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGAc                                                                                                               <  6:313675/148‑1 (MQ=255)
                                      aCCCAGTGAAGCACTGCTTGCGGGGTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGCTGGATATTGGCCAGCAGAccc                                                                                                             >  5:97505/1‑149 (MQ=255)
                                              aaGCACTGCTTGCGGGGTAGGCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGACCGGTGGGTGGATATTGGCCAGCCGACCCGGCCCtgc                                                                                                     >  8:305248/1‑147 (MQ=255)
                                                  aCTGCTTGCGGGCTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCcgcg                                                                                                 >  5:252856/1‑149 (MQ=255)
                                                              gTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCt                                                                                     <  2:334572/149‑1 (MQ=255)
                                                               tAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTc                                                                                    <  1:206542/149‑1 (MQ=255)
                                                                    aaaGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGgcaaccacacgtttagtcattaatacccctttgactaccccgcaagcagtgcttcactgggtctctc                                                                                 <  8:112667‑M2/147‑68 (MQ=255)
                                                                      aGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACagc                                                                             <  3:362010/149‑1 (MQ=255)
                                                                         ggTATTAATGACTAAACGTGTGGTTGCTGGCGAGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACagcgag                                                                          >  1:43564/1‑149 (MQ=255)
                                                                              tAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGcc                                                                                                         <  4:279166/113‑1 (MQ=255)
                                                                                aTGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAgcgccgcg                                                                   >  7:164764/1‑149 (MQ=255)
                                                                                  gACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGAGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGa                                                                                            <  2:66519/122‑1 (MQ=255)
                                                                                  gACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAAAGGGTTTACCCTCGAATACGGTCGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGa                                                                                            >  1:66519/1‑122 (MQ=255)
                                                                                   aCTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCt                                                                >  4:111745/1‑149 (MQ=255)
                                                                                    cTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTg                                                               >  5:135042/1‑149 (MQ=255)
                                                                                    cTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTg                                                               <  6:252856/149‑1 (MQ=255)
                                                                                     tAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTg                                                               >  2:266624/1‑148 (MQ=255)
                                                                                     tAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTg                                                               >  3:252486/1‑148 (MQ=255)
                                                                                     tAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTg                                                               >  8:260975/1‑148 (MQ=255)
                                                                                      aaaCGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTgca                                                             <  3:305872/149‑1 (MQ=255)
                                                                                       aaCGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTcc                                                                                   <  2:387125/126‑1 (MQ=255)
                                                                                       aaCGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTcc                                                                                   >  1:387125/1‑126 (MQ=255)
                                                                                       aaCGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTc                                                                                    >  4:196182/1‑125 (MQ=255)
                                                                                       aaCGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTc                                                                                    <  3:196182/125‑1 (MQ=255)
                                                                                        aCGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGgcaaccacacgtttagtcattaatacccctttgactaccccgcaagcagtgcttcactgggtctctcaagcctacccggatcccggagc                                                           <  7:61787‑M2/149‑90 (MQ=255)
                                                                                          gtgtGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGATCCTACAGCGAGCGCCGCGCCTGCAGCAt                                                         >  7:64631/1‑149 (MQ=255)
                                                                                             tgGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCAtgt                                                       <  8:64631/148‑1 (MQ=255)
                                                                                               gTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCg                                                    >  8:228087/1‑149 (MQ=255)
                                                                                               gTTGCTGGCGTGCGCGCGTAGGAGCGGGTTAACCCGCGAATACGGTGGTGGCGgcaaccacacgtttagtcattaatacccctttgactaccccgcaagcagagcttcactgggtcactcaagcgtacccggatccagcacccccccg                                                     <  8:188790‑M2/148‑96 (MQ=255)
                                                                                                   cTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGGCCTTGCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCTGCATGTGCGGGc                                                 <  6:97505/148‑1 (MQ=255)
                                                                                                    tGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCt                                                >  1:82111/1‑148 (MQ=255)
                                                                                                     ggCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCgg                                                                                                <  1:404842/99‑1 (MQ=255)
                                                                                                     ggCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCgg                                                                                                >  2:404842/1‑99 (MQ=255)
                                                                                                        gTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTTAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCt                                           <  7:244172/149‑1 (MQ=255)
                                                                                                            gcgcgTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTgcgc                                       >  5:312000/1‑149 (MQ=255)
                                                                                                             cgcgTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTc                                                                                    <  1:7747/103‑1 (MQ=255)
                                                                                                             cgcgTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTc                                                                                    >  2:7747/1‑103 (MQ=255)
                                                                                                              gcgTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCt                                     <  3:111745/149‑1 (MQ=255)
                                                                                                              gcgTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCt                                     >  6:165149/1‑149 (MQ=255)
                                                                                                                gTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGc                                   <  5:165149/149‑1 (MQ=255)
                                                                                                                 tattcgCGGGTAAACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGc                                   >  1:227931/6‑148 (MQ=255)
                                                                                                                    gAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGCGaaa                               <  2:43564/149‑1 (MQ=255)
                                                                                                                      gCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGCGAAATc                             >  7:27855/1‑149 (MQ=255)
                                                                                                                      gCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGCGAAATc                             >  7:34001/1‑149 (MQ=255)
                                                                                                                        gggtaaaCCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGCGAAATCGc                           <  2:227931/143‑1 (MQ=255)
                                                                                                                              aCCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGCGAAATCGCCATGt                      <  6:312000/148‑1 (MQ=255)
                                                                                                                                ccGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGCGAAATCGCCATGTTc                    >  5:20189/1‑148 (MQ=255)
                                                                                                                                  gcgAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGCGAAATCGCCATGTTCaaa                 <  4:158906/149‑1 (MQ=255)
                                                                                                                                   cgAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTACCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGCGAAATCGCCATGTTCAaac                >  2:318896/1‑149 (MQ=255)
                                                                                                                                    gAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGCGAAATCGCCATGTTCAaact               >  7:363138/1‑149 (MQ=255)
                                                                                                                                        aCGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCACGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGCGAAATCGCCATGTTCAaactcaa            >  4:50853/1‑148 (MQ=255)
                                                                                                                                         cGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGCGAAATCGCCATGTTCAaactcaac           <  6:20189/148‑1 (MQ=255)
                                                                                                                                               tggCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGCGAAATCGCCATGTTCAAACTCAACTCGAAGc    <  8:34001/149‑1 (MQ=255)
                                                                                                                                               tggCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGCGAAATCGCCATGTTCAAACTCAACTCGAAGc    <  8:27855/149‑1 (MQ=255)
                                                                                                                                                 gcggcAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGCGAAATCGCCATGTTCAAACTCAACTCGAAGCgg  <  7:260975/149‑1 (MQ=255)
                                                                                                                                                   ggcAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGCGAAATCGcc                          >  2:142022/1‑123 (MQ=255)
                                                                                                                                                   ggcAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGCGAAATCGcc                          <  1:142022/123‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CTCATCGGGGGGCTCCTGGATCCGGGTAGGCTTGAGAGACCCAGTGAAGCACTGCTTGCGGGGTAGTCAAAGGGGTATTAATGACTAAACGTGTGGTTGCTGGCGTGCGCGCGTAGGAGCGGGTTTACCCGCGAATACGGTGGTGGCGGCAACGGTGAACGGTGGGTGGATATTGGCCAGCAGACCCGGCCCTTCCGCGGGTGAACCCGCTCCTACAGCGAGCGCCGCGCCTGCAGCATGTGCGGGCTCATCTGCGCCTGCGAAATCGCCATGTTCAAACTCAACTCGAAGCGG  >  NC_002947/5442579‑5442872

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.