New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 22212	45 (0.830)	4 (0.080)	4/248	NT	8.1%	coding (42/360 nt)	PP_0017	transcriptional regulator
	?	NC_002947	= 22227	48 (0.930)					coding (57/360 nt)	PP_0017	transcriptional regulator

CCACACCGATCGCTCAGCCTCGTGATTGCCGATTCAGGCATGTGGGATCAAGATAGTTAGCACGCTTTCTTTCTTGATTGCTAAAATCATCGAACCCATTTTGGAGAATCTTATGTCCCGTCTCGCTGAATTCCGCCTGCTCGAACAACAGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/22059‑22212 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagctcCGCCAGTTGGGCTGCGAGCTGTTGTTCGAGCAGGCGGAATTCAGCGAGACGGGACATAAGATTCTCCAAAATGGGTTCGATGATTTTAGCAATCAAGAAAGAAAGCGTGCTAACTATCTTGATCCCACATGCCTGAATCGGCAATC  <  NC_002947/22227‑22082                                                                                                                                                                                                                                                                                                              CCACACCGATCGCTCAGCCTCGTGATTGCCGATTCAGGCATGTGGGATCAAGATAGTTAGCACGCTTTCTTTCTTGATTGCTAAAATCATCGAACCCATTTTGGAGAATCTTATGTCCCGTCTCGCTGAATTCCGCCTGCTCGAACAAC                                                                                                                                                         <  4:47309/149‑1   ACACCGATCGCTCAGCCTCGTGATTGCCGATTCAGGCATGTGGGATCAAGATAGTTAGCACGCTTTCTTTCTTGATTGCTAAAATCATCGAACCCATTTTGGAGAATCTTATGTCCCGTCTCGCTGAATTCCGCCTGCTCGAACAACAG                                                                                                                                                       >  7:294808/1‑149                              CGATTCAGGCATGTGGGATCAAGATAGTTAGCACGCTTTCTTTCTTGATTGCTAAAATCATCGAACCCATTTTGGAGAATCTTATGTCCCGTCTCGCTGAATTCCGCCTGCTCGAACAACAGCTCCGCCAGTTGGGCTGCGAGCTGTTG                                                                                                                            <  3:212630/149‑1                                                                       TTCTTGATTGCTATAATCATCGAACCCATTTTGGATAATGTTATGTCCCGTCTCGCTTAATTCCGCCTGCTCGAACAACTGCTCCGCCTGTTGGGCTGCGAGCTGTTGTTCGAGCAGGCGGAATTCAGCG                                                                                                      <  6:1641/130‑1                                                                                  TAAAATCATCGAACCCATTTTGGAGAATCTTATGTCCCGTCTCGCTGAATTCCGCCTGCTCGAACAACAGCTCCGCCAGTTGGGCTGCGAGCTGTTGTTC                                                                                                                         <  5:56848/100‑1                                                                                  TAAAATCATCGAACCCATTTTGGAGAATCTTATGTCCCGTCTCGCTGAATTCCGCCTGCTCGAACAACAGCTCCGCCAGTTGGGCTGCGAGCTGTTGTTC                                                                                                                         >  6:56848/1‑100                                                                                                                                                        CTCCGCCAGTTGGGCTGCGAGCTGTTGTTCGAGCAGGCGGAATTCAGCGAGACGGGACATAAGATTCTCCAAAATGGGTTCGATGATTTTAGCAATCAAGAAAGAAAGCGTGCTAACTATCTTGATCCCACATGCCTGAATCGGCAATC  <  5:132668/149‑1                                                                                                                                                                                                                                                                                                              CCACACCGATCGCTCAGCCTCGTGATTGCCGATTCAGGCATGTGGGATCAAGATAGTTAGCACGCTTTCTTTCTTGATTGCTAAAATCATCGAACCCATTTTGGAGAATCTTATGTCCCGTCTCGCTGAATTCCGCCTGCTCGAACAACAGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/22059‑22212 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagctcCGCCAGTTGGGCTGCGAGCTGTTGTTCGAGCAGGCGGAATTCAGCGAGACGGGACATAAGATTCTCCAAAATGGGTTCGATGATTTTAGCAATCAAGAAAGAAAGCGTGCTAACTATCTTGATCCCACATGCCTGAATCGGCAATC  <  NC_002947/22227‑22082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.