New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 27488544 (0.810)3 (0.060) 3/246 NT 7.3% coding (1063/1386 nt) PP_0222 DszA family monooxygenase
?NC_002947 = 274912 35 (0.680)coding (1036/1386 nt) PP_0222 DszA family monooxygenase

GATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/274733‑274885
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgcaaGACAACGCCTGGACCCGCCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGGTCGGCGCGCCTGAACAGGTGGCCGAGCAGTTGATCGCGTGGATCGATGAAACCGGCCTGGACGGTTTCAACCTGA  <  NC_002947/274912‑274771
                                                                                                                                                                                                                                                                                                       
GATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTT                                                                                                                                                    >  2:19784/1‑149
 ATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTG                                                                                                                                                   >  3:170678/1‑149
                CTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTG                                                                                                                                                      <  3:106767/131‑1
                CTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTG                                                                                                                                                      >  4:106767/1‑131
                                           TTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTGCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAAGACAACGCCTGGACCCGCCGGCGCCTGTTGCAACAGCAC                                                                                                         <  8:220510/149‑1
                                              AAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAAGACAACGCCTGGACCCGCCGGCGCCTGTTGCAAC                                                                                                              >  5:182128/1‑141
                                              AAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAAGACAACGCCTGGACCCGCCGGCGCCTGTTGCAAC                                                                                                              <  6:182128/141‑1
                                                                                                                                                  GTTGCAAGACAACGCCTGGACCCGCCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGGTCGGCGCGCCTGAACAGGTGGCCGAGCAGTTGATCGCGTGGATCGATGAAACCGGCCTGGACGGTTTCAACCTGA  >  4:170678/1‑149
                                                                                                                                                                                                                                                                                                       
GATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/274733‑274885
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgcaaGACAACGCCTGGACCCGCCGGCGCCTGTTGCAACAGCACGCCTTGGGCGGCCGCTACGTAACCCTGGTCGGCGCGCCTGAACAGGTGGCCGAGCAGTTGATCGCGTGGATCGATGAAACCGGCCTGGACGGTTTCAACCTGA  <  NC_002947/274912‑274771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.