New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 274885	44 (0.810)	3 (0.060)	3/246	NT	7.3%	coding (1063/1386 nt)	PP_0222	DszA family monooxygenase
	?	NC_002947	= 274912	35 (0.680)					coding (1036/1386 nt)	PP_0222	DszA family monooxygenase

AGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGCCAGTGGACGCGGCGAAGTGCGCGACCCCCGCTTC  >  NC_002947/274738‑275032                                                                                                                                                    |                                                                                                                                                    aGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAAc                                                                                                                                                    <  4:193374/149‑1 (MQ=255)   tCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAg                                                                                                                                                  <  6:233836/149‑1 (MQ=255)           gCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCcggc                                                                                                                                          <  5:330904/149‑1 (MQ=255)             tctcCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCcggcgg                                                                                                                                        >  3:251798/1‑149 (MQ=255)             tctcCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCcggcgg                                                                                                                                        >  2:273495/1‑149 (MQ=255)               tcCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGt                                                                                                                                      >  5:73224/1‑149 (MQ=255)               tcCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAAAAGGCGCCGGCGGGt                                                                                                                                      >  2:318823/1‑149 (MQ=255)                 gggggTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTc                                                                                                                                     <  3:276076/147‑1 (MQ=255)                 cGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTc                                                                                                                                     <  3:277392/148‑1 (MQ=255)                   gggTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAg                                                                                                                                  >  3:308223/1‑149 (MQ=255)                    ggTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCAGGTCCAgg                                                                                                                                 >  6:195287/1‑149 (MQ=255)                        aCGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGt                                                                                                                              <  1:19784/148‑1 (MQ=255)                          ggTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGt                                                                                                                           <  6:264546/149‑1 (MQ=255)                                  tCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCttgcaac                                                                                                                   >  4:170678‑M2/1‑142 (MQ=255)                                     ggTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTgg                                                                                                                >  6:192223/1‑149 (MQ=255)                                       ttGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTGCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAAgacaacgcctggacccgccggcgcctgttgcaacagcac                                                                                                              <  8:220510‑M1/149‑40 (MQ=255)                                        tGAAACCGGCCTGGACGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGgcgc                                                                                                             >  1:89524/1‑149 (MQ=255)                                          aaaCCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAAgacaacgcctggacccgccggcgcctgttgcaac                                                                                                                   <  6:182128‑M1/141‑35 (MQ=255)                                          aaaCCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAAgacaacgcctggacccgccggcgcctgttgcaac                                                                                                                   >  5:182128‑M1/1‑107 (MQ=255)                                              cGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCt                                                                                                       <  4:159551/149‑1 (MQ=255)                                                     gCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGa                                                                                                >  4:277588/1‑149 (MQ=255)                                                       cGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGt                                                                                                                           >  6:242347/1‑120 (MQ=255)                                                       cGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGt                                                                                                                           <  5:242347/120‑1 (MQ=255)                                                            tCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGt                                                                                          <  4:308223/148‑1 (MQ=255)                                                               tCGATCCAAGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGcc                                                                                      >  7:224181/1‑149 (MQ=255)                                                                  aTCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTg                                                                                   <  3:277588/149‑1 (MQ=255)                                                                   tCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTgg                                                                                  >  4:159785/1‑149 (MQ=255)                                                                      aCGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTg                                                                               <  5:192223/149‑1 (MQ=255)                                                                       cgcgATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGa                                                                              <  3:159785/149‑1 (MQ=255)                                                                        gcgATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGaa                                                                             <  6:73224/149‑1 (MQ=255)                                                                        gcgATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGaa                                                                             <  2:166410/149‑1 (MQ=255)                                                                          gATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAgg                                                                           >  3:262594/1‑149 (MQ=255)                                                                                      ggCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTg                                                                 <  7:96567/147‑1 (MQ=255)                                                                                           ccTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGt                                                          <  1:273495/149‑1 (MQ=255)                                                                                           ccTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGt                                                          <  4:251798/149‑1 (MQ=255)                                                                                             tGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGtt                                                         >  5:298610/1‑148 (MQ=255)                                                                                              gTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCATCTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGGGTGGGGTTGGTCCGGtggg                                                       >  2:235411/1‑146 (MQ=255)                                                                                                 cAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATa                                                     <  8:224181/148‑1 (MQ=255)                                                                                                    gcgcgcCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCAGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAggcg                                                 <  5:195287/149‑1 (MQ=255)                                                                                                         ccGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGaa                                            <  4:262594/149‑1 (MQ=255)                                                                                                          cGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAg                                           >  2:66949/1‑149 (MQ=255)                                                                                                           gACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAATAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGt                                          <  1:318823/149‑1 (MQ=255)                                                                                                            aCCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTc                                         >  3:288871/1‑149 (MQ=255)                                                                                                              cAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGa                                       <  2:89524/149‑1 (MQ=255)                                                                                                               aGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGa                                                                              >  6:97096/1‑109 (MQ=255)                                                                                                               aGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGa                                                                              <  5:97096/109‑1 (MQ=255)                                                                                                               aGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGAt                                      <  1:66949/149‑1 (MQ=255)                                                                                                                      cGTAGCGTCCGCCCAAGGCGTTCTGTTGCAACAGGCGCCTGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGGTGCCCTGGTGGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGCCAGTg                               <  1:58273/149‑1 (MQ=255)                                                                                                                                     aGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGCCAGTGGACGCGGCGAAGTgc                <  4:288871/149‑1 (MQ=255)                                                                                                                                         gTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCttgcaacagcacgccttgggcggccgctacgtaaccctggtcggcgcgcctgcacaggtggccgagcagttgatcgcgtggatcgatgaaaccggcctggacggtttcaa            <  8:220510‑M2/149‑111 (MQ=255)                                                                                                                                              gTTGCAAgacaacgcctggacccgccggcgcctgttgcaacagcacgccttgggcggccgctacgtaaccctggtcggcgcgcctgaacaggtggccgagcagttgatcgcgtggatcgatgaaaccggcctggacggtttcaacctga       >  4:170678‑M1/1‑7 (MQ=255)                                                                                                                                              gTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCttgcaacagcacgccttgggcggccgctacgtaaccctggtcggcgcgcctgaacaggtggccgagcagttgatcgcgtggatcgatgaaaccggcctggacggttt               <  6:182128‑M2/141‑108 (MQ=255)                                                                                                                                              gTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCttgcaacagcacgccttgggcggccgctacgtaaccctggtcggcgcgcctgaacaggtggccgagcagttgatcgcgtggatcgatgaaaccggcctggacggttt               >  5:182128‑M2/1‑34 (MQ=255)                                                                                                                                               ttGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGCCAGTGGACGCGGCGAAGTGCGCGACCCCCg      >  6:263398/1‑149 (MQ=255)                                                                                                                                                  cAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGCCAGTGGACGCGGCGAAGTGCGCGACCCCCGCtt   >  5:136122/1‑149 (MQ=255)                                                                                                                                                   aaCAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCCTGGCTGACTGGATGGCGTTGCGCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGCCAGTGGACGCGGCGAAGTGCGCGACCCCCGCTTc  >  5:240713/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                    AGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGCCAGTGGACGCGGCGAAGTGCGCGACCCCCGCTTC  >  NC_002947/274738‑275032

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.