New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 274885	44 (0.810)	3 (0.060)	3/246	NT	7.3%	coding (1063/1386 nt)	PP_0222	DszA family monooxygenase
	?	NC_002947	= 274912	35 (0.680)					coding (1036/1386 nt)	PP_0222	DszA family monooxygenase

TCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGCCAGTGGACGCGGCGAAGTGCGCGACCCCCGCTTCGGCGCTGGCGTGGCGCAGGTAC  >  NC_002947/274771‑275054                                                                                                                                              |                                                                                                                                               tCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCttgcaac                                                                                                                                         >  4:170678‑M2/1‑142 (MQ=255)    ggTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTgg                                                                                                                                      >  6:192223/1‑149 (MQ=255)       tGAAACCGGCCTGGACGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGgcgc                                                                                                                                   >  1:89524/1‑149 (MQ=255)             cGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCt                                                                                                                             <  4:159551/149‑1 (MQ=255)                    gCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGa                                                                                                                      >  4:277588/1‑149 (MQ=255)                           tCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGt                                                                                                                <  4:308223/148‑1 (MQ=255)                              tCGATCCAAGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGcc                                                                                                            >  7:224181/1‑149 (MQ=255)                                 aTCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTg                                                                                                         <  3:277588/149‑1 (MQ=255)                                  tCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTgg                                                                                                        >  4:159785/1‑149 (MQ=255)                                     aCGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTg                                                                                                     <  5:192223/149‑1 (MQ=255)                                      cgcgATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGa                                                                                                    <  3:159785/149‑1 (MQ=255)                                       gcgATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGaa                                                                                                   <  6:73224/149‑1 (MQ=255)                                       gcgATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGaa                                                                                                   <  2:166410/149‑1 (MQ=255)                                         gATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAgg                                                                                                 >  3:262594/1‑149 (MQ=255)                                                     ggCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTg                                                                                       <  7:96567/147‑1 (MQ=255)                                                          ccTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGt                                                                                <  4:251798/149‑1 (MQ=255)                                                          ccTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGt                                                                                <  1:273495/149‑1 (MQ=255)                                                            tGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGtt                                                                               >  5:298610/1‑148 (MQ=255)                                                             gTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCATCTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGGGTGGGGTTGGTCCGGtggg                                                                             >  2:235411/1‑146 (MQ=255)                                                                cAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATa                                                                           <  8:224181/148‑1 (MQ=255)                                                                   gcgcgcCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCAGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAggcg                                                                       <  5:195287/149‑1 (MQ=255)                                                                        ccGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGaa                                                                  <  4:262594/149‑1 (MQ=255)                                                                         cGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAg                                                                 >  2:66949/1‑149 (MQ=255)                                                                          gACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAATAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGt                                                                <  1:318823/149‑1 (MQ=255)                                                                           aCCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTc                                                               >  3:288871/1‑149 (MQ=255)                                                                             cAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGa                                                             <  2:89524/149‑1 (MQ=255)                                                                              aGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGa                                                                                                    <  5:97096/109‑1 (MQ=255)                                                                              aGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGa                                                                                                    >  6:97096/1‑109 (MQ=255)                                                                              aGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGAt                                                            <  1:66949/149‑1 (MQ=255)                                                                                     cGTAGCGTCCGCCCAAGGCGTTCTGTTGCAACAGGCGCCTGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGGTGCCCTGGTGGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGCCAGTg                                                     <  1:58273/149‑1 (MQ=255)                                                                                                    aGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGCCAGTGGACGCGGCGAAGTgc                                      <  4:288871/149‑1 (MQ=255)                                                                                                        gTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCttgcaacagcacgccttgggcggccgctacgtaaccctggtcggcgcgcctgcacaggtggccgagcagttgatcgcgtggatcgatgaaaccggcctggacggtttcaa                                  <  8:220510‑M2/149‑111 (MQ=255)                                                                                                             gTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCttgcaacagcacgccttgggcggccgctacgtaaccctggtcggcgcgcctgaacaggtggccgagcagttgatcgcgtggatcgatgaaaccggcctggacggttt                                     <  6:182128‑M2/141‑108 (MQ=255)                                                                                                             gTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCttgcaacagcacgccttgggcggccgctacgtaaccctggtcggcgcgcctgaacaggtggccgagcagttgatcgcgtggatcgatgaaaccggcctggacggttt                                     >  5:182128‑M2/1‑34 (MQ=255)                                                                                                              ttGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGCCAGTGGACGCGGCGAAGTGCGCGACCCCCg                            >  6:263398/1‑149 (MQ=255)                                                                                                                 cAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGCCAGTGGACGCGGCGAAGTGCGCGACCCCCGCtt                         >  5:136122/1‑149 (MQ=255)                                                                                                                  aaCAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCCTGGCTGACTGGATGGCGTTGCGCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGCCAGTGGACGCGGCGAAGTGCGCGACCCCCGCTTc                        >  5:240713/1‑149 (MQ=255)                                                                                                                               gggTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGc                                                          <  7:123609/102‑1 (MQ=255)                                                                                                                               gggTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGc                                                          >  8:123609/1‑102 (MQ=255)                                                                                                                                        cGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGCCAGTGGACGCGGCGAAGTGCGCGACCCCCGCTTCGGCGCTGGCGTGGCGCAGGTAc  <  6:136122/149‑1 (MQ=255)                                                                                                                                              cTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGCCAGTGGACGCGGCGAAGTGCGCGACCCCCGCTTCGGCGCtg                 >  6:245887/1‑128 (MQ=255)                                                                                                                                              cTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGCCAGTGGACGCGGCGAAGTGCGCGACCCCCGCTTCGGCGCtg                 <  5:245887/128‑1 (MQ=255)                                                                                                                                              |                                                                                                                                               TCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCAGGCGCGCCGACCAGGGTTACGTAGCGGCCGCCCAAGGCGTGCTGTTGCAACAGGCGCCGGCGGGTCCAGGCGTTGTCTTGCAACTGGCGCGTGGCTGACTGGATGGCGTTGCCCTGGTTGAAGGCAATGGGTTGGTCCAGTTCATAGGCGGCGAAGTCGATGCCAGTGGACGCGGCGAAGTGCGCGACCCCCGCTTCGGCGCTGGCGTGGCGCAGGTAC  >  NC_002947/274771‑275054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.