New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	747817 =	52 (0.960)	3 (0.060)	3/250	NT	5.9%	coding (151/216 nt)	PP_5448	hypothetical protein
	?	NC_002947	747850 =	45 (0.870)					coding (184/216 nt)	PP_5448	hypothetical protein

AAATTTAAATAGCGTACGCATAACATTCTTCCATTGAGTAATTGTCGCCTAAAGGCGATGCGTCACAGAGCGATATCACTTTAACATCATCCATCTAGGTGATCTGGCTCCATGTGGTTGAGTTGCGCGACAAAGAGCTCGGCGCGAAACTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/747968‑747817 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aactcAACCACATGGAGCCAGATCACCTAGATGGATGATGTTAAAGTGATATCGCTCTGTGACGCATCGCCTTTAGGCGACAATTACTCAATGGAAGAATGTTATGCGTACGCT  >  NC_002947/747850‑747958                                                                                                                                                                                                                                                                       AAATTTAAATAGCGTACGCATAACATTCTTCCATTGAGTAATTGTCGCCTAAAGGCGATGCGTCACAGAGCGATATCACTTTAACATCATCCATCTAGGTGATCTGGCTCCATGTGGTTGAGTTGCGCGACAAAGAGCTCGGCGCGAAA                                                                                                                  >  2:184660/1‑149                                                                                                                 TGTGGTTGAGTTGCGCGACAAAGAGCTCGGCGCGAAACTCAACCACATGGAGCCAGATCACCTAGATGGATGATGTTAAAGTGATATCGCTCTGTGACGCATCGCCTTTAGGCGACAATTACTCAATGGAAGAATGTTATGCGTACGCT  >  7:215753/1‑149                                                                                                                      TTGAGTTGCGCGACAAAGAGCTCGGCGCGAAACTCAACCACATGGAGCCAGATCACCTAGATGGATGATGTTAAAGTGATATCGCTCTGAGACGCATCGCCTTTAGGCGACAATTACTCAA                         >  7:306819/1‑121                                                                                                                      TTGAGTTGCGCGACAAAGAGCTCGGCGCGAAACTCAACCACATGGAGCCAGATCACCTAGATGGATGATGTTAAAGTGATATCGCTCTGAGACGCATCGCCTTTAGGCGACAATTACTCAA                         <  8:306819/121‑1                                                                                                                                                                                                                                                                       AAATTTAAATAGCGTACGCATAACATTCTTCCATTGAGTAATTGTCGCCTAAAGGCGATGCGTCACAGAGCGATATCACTTTAACATCATCCATCTAGGTGATCTGGCTCCATGTGGTTGAGTTGCGCGACAAAGAGCTCGGCGCGAAACTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/747968‑747817 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aactcAACCACATGGAGCCAGATCACCTAGATGGATGATGTTAAAGTGATATCGCTCTGTGACGCATCGCCTTTAGGCGACAATTACTCAATGGAAGAATGTTATGCGTACGCT  >  NC_002947/747850‑747958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.