New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 760073	49 (0.910)	3 (0.060)	3/248	NT	6.3%	coding (212/228 nt)	PP_5453	hypothetical protein
	?	NC_002947	= 760099	43 (0.830)					intergenic (+10/+55)	PP_5453/PP_0652	hypothetical protein/gluconate transporter

AGGCGAGGCCCTGGTCCAGCACGACGAAATGCTCGAGTGCGAACACAACCCGCGGCTGAGTTTTCGCAACACGGCCGGTATCCATCAGGCGATCCGGATCATCAGCCGGTTGGCCAGTGAGCAGTGTGGGAAGGTAATGGAACGAAGCGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/759921‑760073 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagcaCCGATCTGGCCTAACGCTGCAGATCCTGCTCGCTTCGTTCCATTACCTTCCCACACTGCTCACTGGCCAACCGGCTGATGATCCGGATCGCCTGATGGATACCGGCCGTGTTGCGAAAACTCAGCCGCGGGTTGTGTTCGCACTCGA  <  NC_002947/760099‑759953                                                                                                                                                                                                                                                                                                              AGGCGAGGCCCTGGTCCAGCACGACGAAATGCTCGAGTGCGAACACAACCCGCGGCTGAGTTTTCGCAACACGGCCGGTATCCATCAGGCGATCCGGATCATCAGCCGGTTGGCCAGTGAGCAGTGTGGGAAGGTAATGGAACGAAGC                                                                                                                                                          >  6:67963/1‑148  GGCGAGGCCCTGGTCCAGCACGACGAAATGCTCGAGTGCGAACACAACCCGCGGCTGAGTTTTCGCAACACGGCCGGTATCCATCAGGCGATCCGGATCATCAGCCGGTTGGCCAGTGAGCAGTGTGGGAAGGTAATGGAACGAAGCGA                                                                                                                                                        <  1:34346/149‑1  GGCGAGGCCCTGGTCCAGCACGACGAAATGCTCGAGTGCGAACACAACCCGCGGCTGAGTTTTCGCAACACGGCCGGTATCCATCAGGCGATCCGGATCATCAGCCGGTTGGCCAGTGAGCAGTGTGGGAAGGTAATGGAACGAAGCGA                                                                                                                                                        <  7:266200/149‑1   GCGAGGCCCTGGTCCAGCACGACGAAATGCTCGAGTGCGAACACAACCCGCGGCTGAGTTTTCGCAACACGGCCGGTATCCATCAGGCGATCCGGATCATCAGCCGGTTGGCCAGTGAGCAGTGTGGGAAGGTAATGGAACGAAGCGA                                                                                                                                                        <  2:19830/148‑1     GAGGCCCTGGTCCAGCACGACGAAATGCTCGAGTGCGAACACAACCCGCGGCTGAGTTTTCGCAACACGGCCGGTATCCATCAGGCGATCCGGATCATCAGCCGGTTGGCCAGTGAGCAGTGTGGGAAGGTAATGGAACGAAGCGAGCA                                                                                                                                                     <  5:107107/149‑1                                         GAACACAACCCGCGGCTGAGTTTTCGCAACACGGCCTGTATCCATCAGGCGATCCGGATCATCAGCCGGTTGGCCAGTGAGCAGTGTGGGAAGGTAATGGAACGAAGCGAGCACCGATCTGGCCTAACGCTGCAGATCCTGCTCGCTTC                                                                                                                 <  7:201147/149‑1                                                                                   CATCAGGCGATCCGGATCATCAGCCGGTTGGCCAGTGAGCAGTGTGGGAAGGTAATGGAACGAAGCGAGCACCGATCTGGCCTAACGCTGCAGATC                                                                                                                            <  3:299761/96‑1                                                                                   CATCAGGCGATCCGGATCATCAGCCGGTTGGCCAGTGAGCAGTGTGGGAAGGTAATGGAACGAAGCGAGCACCGATCTGGCCTAACGCTGCAGATC                                                                                                                            >  4:299761/1‑96                                                                                                                                                      AGCACCGATCTGGCCTAACGCTGCAGATCCTGCTCGCTTCGTTCCATTACCTTCCCACACTGCTCACTGGCCAACCGGCTGATGATCCGGATCGCCTGATGGATACCGGCCGTGTTGCGAAAACTCAGCCGCGGGTTGTGTTCGCACTC    <  2:287303/149‑1                                                                                                                                                        CACCGATCTGGCCTAACGCTGCAGATCCTGCTCGCTTCGTTCCATTACCTTCCCACACTGCTCACTGGCCAACCGGCTGATGATCCGGATCGCCTGATGGATACCGGCCGTGTTGCGAAAACTCAGCCGCGGGTTGTGTTCGCACTCGA  <  4:36940/149‑1                                                                                                                                                                                                                                                                                                              AGGCGAGGCCCTGGTCCAGCACGACGAAATGCTCGAGTGCGAACACAACCCGCGGCTGAGTTTTCGCAACACGGCCGGTATCCATCAGGCGATCCGGATCATCAGCCGGTTGGCCAGTGAGCAGTGTGGGAAGGTAATGGAACGAAGCGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/759921‑760073 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagcaCCGATCTGGCCTAACGCTGCAGATCCTGCTCGCTTCGTTCCATTACCTTCCCACACTGCTCACTGGCCAACCGGCTGATGATCCGGATCGCCTGATGGATACCGGCCGTGTTGCGAAAACTCAGCCGCGGGTTGTGTTCGCACTCGA  <  NC_002947/760099‑759953

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.