| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1531769 | 21 (0.390) | 5 (0.110) | 3/212 | NT | 15.8% | coding (107/630 nt) | PP_1344 | hypothetical protein |
| ? | NC_002947 | = 1531817 | 36 (0.820) | coding (59/630 nt) | PP_1344 | hypothetical protein | |||||
CAAGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1531600‑1531769‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcctgtgccggcctcttcgcgggTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAG‑ACTGTGCCCACGTCACTTCACGCGTACCCCCATGGCCTACAAACCCTCCCCCGCCCAGCCA < NC_002947/1531817‑1531672 CAAGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGTTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGC > 7:193214/1‑149CAAGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGC > 7:2213/1‑149 agctCTCCCGGCGCTCGGCCTGGTTCCGCGGCCGCGGCTGCGGGCGCACCGGGCGCCGCCGGGGGGATGGGGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCT < 6:174805/145‑1 TCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCC > 1:46581/1‑149 TCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCT > 5:174805/1‑144 CCAGGCGCGCGGCCGGGTTCAGCAGCAGGCGCCGCGGGCGCACCGGGCGCAGCTGGGCGTATGGGGGGGGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCG < 8:41790/149‑1 CAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGG > 7:273867/1‑149 GCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCT > 6:247080/1‑149 gagcGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCT > 1:295031/5‑148 CCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCGGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGG < 2:113472/149‑1 ggGGCGGGGCGGGGGCGGGTTTGTAGGCCAGGGGGGTACGCGGGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCC < 6:242871/146‑1 GGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCC < 2:74619/116‑1 GGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCC < 2:69674/116‑1 GGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCC > 1:74619/1‑116 GGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCC > 1:69674/1‑116 CGGCCTCTTCGCGGGTCAACCCGCTCCTACAAGCTACCGATACCCCTGGCCGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAG‑ACTGTGCCCACGTCACTTCACGCGTACCCCCATGGCCTACAAACCCTCC < 1:185618/149‑1 GCCGCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAGCACTGTGCCCACGTCACTTCACGCGTACCCCCATGGCCTACAAACCCTCCC < 1:258900/149‑1 tgCGCGGGTCAACCCGCTCCTACAAGATCCCGATAACCCTGGCAGGAGCGGGTCCCCCCGCGAATAGGCCGGCACAGGCAACGGAGATGTTAG‑ACTGTGCCCACGTCACTTCACGCGTACCCCCATGGCCTACAAACCCTCCCCCGC < 3:48158/145‑1 TTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAG‑ACTGTGCCCACGTCACTTCACGCGTACCCCCATGGCCTA > 4:298138/1‑132 TTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAG‑ACTGTGCCCACGTCACTTCACGCGTACCCCCATGGCCTA < 3:298138/132‑1 GCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAG‑ACTGTGCCCACGTCACTTCACGCGTACCCCCATGGCCTACAAACCCTC > 5:287156/1‑138 GCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAG‑ACTGTGCCCACGTCACTTCACGCGTACCCCCATGGCCTACAAACCCTC < 6:287156/138‑1 GGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAG‑ACTGTGCCCACGTCACTTCACGCGTACCCCCATGGCCTACAACCCCACGCCCCCCCcccac > 4:314985/1‑144 CAAGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1531600‑1531769‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcctgtgccggcctcttcgcgggTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAACGGAGATGTTAG‑ACTGTGCCCACGTCACTTCACGCGTACCCCCATGGCCTACAAACCCTCCCCCGCCCAGCCA < NC_002947/1531817‑1531672 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |