New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1727994 | 44 (0.810) | 3 (0.060) | 3/252 | NT | 6.3% | coding (170/2487 nt) | plsB | glycerol‑3‑phosphate acyltransferase |
? | NC_002947 | = 1728053 | 47 (0.900) | coding (111/2487 nt) | plsB | glycerol‑3‑phosphate acyltransferase |
AGAACGCGGCGGGTTCCTGCAGTGGGCCGACGGCTACCGGCAGCACCGGGCGCGGCAGCCCCGCCTTGGTGCACTCGTGGTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1727911‑1727994 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaCCGCAGCCGGCCGGTGTTCTATGCGTTGCCCTCGCCCGCGCTCACCGACCTGGCCGTGCTCGACCACGAGTGCACCAAGGCGGGGCTGCCGCGCCCGGTGCTGCCGGTAGCCGTCGGCCCACTGCAGGAACCCGCCGCGTTCTTCTAC < NC_002947/1728053‑1727906 AGAACGCGGCGGGTTCCTGCAGTGGGCCGACGGCTACCGGCAGCACCGGGCGCGGCAGCCCCGCCTTGGTGCACTCGTGGTCGACCGCAGCCGGCCGGTGTTCTATGCGTTGCCCTCGCCCGCGCTCACCGACCTGGCCGTGCTCGACC < 4:85139/149‑1 CCGACGGCTACCGGCAGCACCGGGCGCGGCAGCCCCGCCTTGGTGCACTCGTGGTCGACCGCAGCCGGCCGGTGTTCTATGCGTTGCCCTCGCCCGCGCTCACCGACCTGGCCGTGCTCGACCAC < 1:119728/125‑1 CCGACGGCTACCGGCAGCACCGGGCGCGGCAGCCCCGCCTTGGTGCACTCGTGGTCGACCGCAGCCGGCCGGTGTTCTATGCGTTGCCCTCGCCCGCGCTCACCGACCTGGCCGTGCTCGACCAC > 2:119728/1‑125 ACCGCAGCCGGCCGGTGTTCTATGCGTTGCCCTCGCCCGCGCTCACCGACCTGGCCGTGCTCGACCACGAGTGCACCAAGGCGGGGCTGCCGCGCCCGGTGCTGCCGGTAGCCGTCGGCCCACTGCAGGAACCCGCCGCGTTCTTCTAC < 5:170635/149‑1 AGAACGCGGCGGGTTCCTGCAGTGGGCCGACGGCTACCGGCAGCACCGGGCGCGGCAGCCCCGCCTTGGTGCACTCGTGGTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1727911‑1727994 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaCCGCAGCCGGCCGGTGTTCTATGCGTTGCCCTCGCCCGCGCTCACCGACCTGGCCGTGCTCGACCACGAGTGCACCAAGGCGGGGCTGCCGCGCCCGGTGCTGCCGGTAGCCGTCGGCCCACTGCAGGAACCCGCCGCGTTCTTCTAC < NC_002947/1728053‑1727906 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |