New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1798399 =	38 (0.700)	3 (0.060)	3/242	NT	7.5%	coding (322/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
	?	NC_002947	1798455 =	39 (0.780)					coding (378/1128 nt)	lpxB	lipid‑A‑disaccharide synthase

ACGCACTGGCACACCCTGCTCTTCGTAGAACCGCGCCTCGAACGGCAGCAGCGTCAGCATCAGGTCGCAGCCTTCGCGGATCTTCAGCACGCGCTTCTGCCGCCAGGCCCACACTGACGGGCTGACATAGTGCACGGTCTTGATCCCGGCCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1798554‑1798399 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctggcgGCAGAAGCGCGTGCTGAAGATCCGCGAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGC  >  NC_002947/1798455‑1798602                                                                                                                                                                                                                                                                                                                  ACGCACTGGCACACCCTGCTCTTCGTAGAACCGCGCCTCGAACGGCAGCAGCGTCAGCATCAGGTCGCAGCCTTCGCGGATCTTCAGCACGCGCTTCTGCCGCCAGGCCCACACTGACGGGCTGACATAGTGCACGGTCTTGATCCCGG                                                                                                                                                             <  5:75112/149‑1  CGCACTGGCACACCCTGCTCTTCGTAGAACCGCGCCTCGAACGGCAGCAGCGTCAGCATCAGGTCGCAGCCTTCGCGGATCTTCAGCACGCGCTTCTGCCGCCAGGCCCACACTGACGGGCTGACATAGTGCACGGTCTTGATCCCGGC                                                                                                                                                            <  2:27293/149‑1    CACTGGCACACCCTGCTCTTCGTAGAACCGCGCCTCGAACGGCAGCAGCGTCAGCATCAGGTCGCAGCCTTCGCGGATCTTCAGCACGCGCTTCTGCCGCCAGGCCCACACTGACGGGCTGACATAGTGCACGGTCTTGATCCCGGCCT                                                                                                                                                          <  5:171997/149‑1     ACTGGCACACCCTGCTCTTCGTAGAACCGCGCCTCGAACGGCAGCAGCGTCAGCATCAGGTCGCAGCCTTCGCGGATCTTCAGCACGCGCTTCTGCCGCCAGGCCCACACTGACGGGCTGACATAGTGCACGGTCTTGATCCCGGCCTG                                                                                                                                                         >  6:247812/1‑149                   CTCTTCGTAGAACCGCGCCTCGAACGGCAGCAGCGTCAGCATCAGGTCGCAGCCTTCGCGGATCTTCAGCACGCGCTTCTGCCGCCAGGCCCACACTGACGGGCTGACATAGTGCACGGTCTTGATCCCGGCCTGG                                                                                                                                                        <  1:121639/136‑1                   CTCTTCGTAGAACCGCGCCTCGAACGGCAGCAGCGTCAGCATCAGGTCGCAGCCTTCGCGGATCTTCAGCACGCGCTTCTGCCGCCAGGCCCACACTGACGGGCTGACATAGTGCACGGTCTTGATCCCGGCCTGG                                                                                                                                                        >  2:121639/1‑136                                                                                                   GCCGCCAGGCCCACACTGACGGGCTGACATAGTGCACGGTCTTGATCCCGGCCTGGCGGCAGAAGCGCGTGCTGAAGATCCGCGAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTG                                                           >  5:120728/1‑149                                                                                                    CCGCCAGGCCCACACTGACGGGCTGACATAGTGCACGGTCTTGATCCCGGCCTGGCGGCAGAAGCGCGTGCTGAAGATCCGCGAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGC                                                          >  6:84426/1‑149                                                                                                                     ACGGGCTGACATAGTGCACGGTCTTGATCCCGGCCTGGCGGCAGAAGCGCGTGCTGAAGATCCGCGAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGG                                          <  5:84426/148‑1                                                                                                                                                    GGCCTGGCGGCAGAAGCGCGTGCTGAAGATCCGCGAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAA           <  6:267230/148‑1                                                                                                                                                     GCCTGGCGGCAGAAGCGCGTGCTGAAGATCCGCGAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGC         >  7:139806/1‑149                                                                                                                                                     GCCTGGCGGCAGAAGCGCGTGCTGAAGATCCGCGAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCAC                                      <  1:128972/120‑1                                                                                                                                                     GCCTGGCGGCAGAAGCGCGTGCTGAAGATCCGCGAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCAC                                      >  2:128972/1‑120                                                                                                                                                       CTGGCGGCAGAAGCGCGTGCTGAAGATCCGCGAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCC        >  4:305033/1‑148                                                                                                                                                            GGCAGAAGCGCGTGCTGAAGATCCGCGAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCATCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGC  >  8:281395/1‑149                                                                                                                                                                                                                                                                                                                  ACGCACTGGCACACCCTGCTCTTCGTAGAACCGCGCCTCGAACGGCAGCAGCGTCAGCATCAGGTCGCAGCCTTCGCGGATCTTCAGCACGCGCTTCTGCCGCCAGGCCCACACTGACGGGCTGACATAGTGCACGGTCTTGATCCCGGCCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1798554‑1798399 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctggcgGCAGAAGCGCGTGCTGAAGATCCGCGAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGC  >  NC_002947/1798455‑1798602

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.