New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1887956 =	58 (1.070)	3 (0.060)	3/250	NT	5.8%	coding (2317/3480 nt)	PP_1695	sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator
	?	NC_002947	1888001 =	42 (0.810)					coding (2272/3480 nt)	PP_1695	sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator

GTTCCCCAATGGCCGGGTGATCGAGCTGATCGGCAACCCGATGCCGGGCGGTGGCTTTGTCATGAGCTTCACCGACATCACCCCGTTCCGCGAGGCCGAGCAGGCCCTGCGCGATGCCAACGAACGCCTTGAGCAACGCGTGGCGGAGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1888107‑1887956 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaGGGCCTGCTCGGCCTCGCGGAACGGGGTGATGTCGGTGAAGCTCATGACAAAGCCACCGCCCGGCATCGGGTTGCCGATCAGCTCGATCACCCGGCCATTGGGGAACAGCCGCTCGGAGGAGTGCGCGCGGCCCTGGCGCATC  >  NC_002947/1888001‑1888143                                                                                                                                                                                                                                                                                                         GTTCCCCAATGGCCGGGTGATCGAGCTGATCGGCAACCCGATGCCGGGCGGTGGCTTTGTCATGAGCTTCACCGACATCACCCCGTTCCGCGAGGCCGAGCAGGCCCTGCGCGATGCCAACGAACGCCTTGAGCAACGCGTGGCGGAGC                                                                                                                                                    >  5:203970/1‑149                                                                                                          CCTGCGCGATGCCAACGAACGCCTTGAGCAACGCGTGGCGGAGCGCAGGGCCTGCTCGGCCTCGCGGAACGGGGTGATGTCGGTGAAGCTCATGACAAAGCCACCGCCCGGCATCGGGTTGCCGATCAGCTC                                                            >  3:35411/1‑132                                                                                                          CCTGCGCGATGCCAACGAACGCCTTGAGCAACGCGTGGCGGAGCGCAGGGCCTGCTCGGCCTCGCGGAACGGGGTGATGTCGGTGAAGCTCATGACAAAGCCACCGCCCGGCATCGGGTTGCCGATCAGCTC                                                            <  4:35411/132‑1                                                                                                            TGCGCGATGCCAACGAACGCCTTGAGCAACGCGTGGCGGAGCGCAGGGCCTGCTCGGCCTCGCGGAACGGGGTGATGTCGGTGAAGCTCATGACAAAGCCACCGCCCGGCATCGGGTTGCCGATCAGCTCGATCACCCGGCCATTGGG                                          >  5:274630/1‑148                                                                                                                                                    GCGCAGGGCCTGCTCGGCCTCGCGGAACGGGGTGATGTCGGTGAAGCTCATGACAAAGCCACCGCCCGGCATCGGGTTGCCGATCAGCTCGATCACCCGGCCATTGGGGAACAGCCGCTCGGAGGAGTGCGCGCGGCCCTGGCGCATC  <  5:342561/148‑1                                                                                                                                                     CGCAGGGCCTGCTCGGCCTCGCGGAACGGGGTGATGTCGGTGAAGCTCATGACAAAGCCACCGCCCGGCATCGGGTTGCCGATCAGCTCGATCACCCGGCCATTGGGGAACAGCCGCTCGGAGGAGTGCGCGCGGCCCTGGCGCATC  >  7:149278/1‑147                                                                                                                                                      GCAGGGCCTGCTCGGCCTCGCGGAACGGGGTGATGTCGGTGAAGCTCATGACAAAGCCACCGCATGGCATCGGGTTGCCGATCAGCTCGA                                                          >  1:276317/1‑90                                                                                                                                                                                                                                                                                                         GTTCCCCAATGGCCGGGTGATCGAGCTGATCGGCAACCCGATGCCGGGCGGTGGCTTTGTCATGAGCTTCACCGACATCACCCCGTTCCGCGAGGCCGAGCAGGCCCTGCGCGATGCCAACGAACGCCTTGAGCAACGCGTGGCGGAGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1888107‑1887956 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaGGGCCTGCTCGGCCTCGCGGAACGGGGTGATGTCGGTGAAGCTCATGACAAAGCCACCGCCCGGCATCGGGTTGCCGATCAGCTCGATCACCCGGCCATTGGGGAACAGCCGCTCGGAGGAGTGCGCGCGGCCCTGGCGCATC  >  NC_002947/1888001‑1888143

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.