New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2472345	38 (0.700)	3 (0.060)	3/246	NT	7.1%	coding (1751/1851 nt)	PP_2167	PhoD‑like phosphatase
	?	NC_002947	= 2472381	43 (0.840)					coding (1715/1851 nt)	PP_2167	PhoD‑like phosphatase

GAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCTGTAAAAACTCTGAATCTCACTACGCCCGGTTTTTAAACTCTGTAGCCTCACCCCCGCCAGCATCCAGCTGGTACACCCGCGCCGGCCGCCCCTGTTCATCAAAAAACACCTGTCCCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2472191‑2472345 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccagccACAGCAAGGCCGGGGAACGGCTGTGGAATGGTGCCGGGCTGGGACAGGTGTTTTTTGATGAACAGGGGCGGCCGGCGCGGGTGTACCAGCTGGATGCTGGCGGGGGTGAGGCTACAGAGTTTAAAAACCGGGCGTAGTGAGATTCA  <  NC_002947/2472381‑2472236                                                                                                                                                                                                                                                                                                               GAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCTGTAAAAACTCTGAATCTCACTACGCCCGGTTTTTAAACTCTGTAGCCTCACCCCCGCCAGCATCCAGCTGGTACACCCGCGCCGGCCGCCCCTGTTCATCAAAAAACACCTGTC                                                                                                                                                          <  7:195743/149‑1  AGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCTGTAAAAACTCTGAATCTCACTACGCCCGGTTTTTAAACTCTGTAGCCTCACCCCCGCCAGCATCCAGCTGGTACACCCGCGCCGGCCGCCCCTGTTCATCAAAAAACACCTGTCC                                                                                                                                                         <  2:169540/149‑1                       tCCGGCACAGGCTGTAAAAACTCTGAATCTCACTAAGCCCGTTTTTTAAACTCTGTAGCCTCACCCCCGCCAGCATCCAGCTGGTACACCCGCGCCGGCCGCCCCTGTTCATCAAAAAACACCTGTC                                                                                                                                                          <  2:49256/126‑1                       GCCGGCACAGGCTGTAAAAACTCTGAATCTCACTACGCCCGGTTTTTAAACTCTGTAGCCTCACCCCCGCCAGCATCCAGCTGGTACACCCGCGCCGGCCGCCCCTGTTCATCAAAAAACACCTGTC                                                                                                                                                          >  1:49256/1‑127                                                      ACTACGCCCGGTTTTTAAACTCTGTAGCCTCACCCCCGCCAGCATCCAGCTGGTACACCCGCGCCGGCCGCCCCTGTTCATCAAAAAACACCTGTCCCAGCCACAGCAAGGCCGGGGAACGGCTGTGGAATGGTGCCGGGCTGGGACAG                                                                                                     <  8:173754/149‑1                                                                     TAAACTCTGTAGCCTCACCCCCGCCAGCATCCAGCTGGTACACCCGCGCCGGCCGCCCCTGTTCATCAAAAAACACCTGTCCCAGCCACAGCAAGGCCGGGGAACGGCTGTGGAATGGTGCCGGGCTGGGAC                                                                                                       <  1:50887/132‑1                                                                     TAAACTCTGTAGCCTCACCCCCGCCAGCATCCAGCTGGTACACCCGCGCCGGCCGCCCCTGTTCATCAAAAAACACCTGTCCCAGCCACAGCAAGGCCGGGGAACGGCTGTGGAATGGTGCCGGGCTGGGAC                                                                                                       >  2:50887/1‑132                                                                                                                                                         GCCACATCAAGGCCGTGTAACGGCTGTGGAATGGTGCCGGTCTTGGACAGGTGTTTTTTTATGAACAGGGGCGACCGGCGCGTGTGTACCAGCTGGATGCTGGCGGGGTTGATGCTACAGAGTTTAAAAACCGGGCGTAGTGAGATTCA  <  7:299269/149‑1                                                                                                                                                          CCACAGCAAGGCGGGGGAACGGCAGAGGAATGGTGCAGGGCTGGGACAGGTGTTTTTTGATGAACAGGGGCGGCCGGCGCGGGTGTACCAGCTGGATGCTGGCGGGGGTGAGGCTACAGAGTTTAAAACCCGGGCGTAGTGAGATT    >  2:331394/1‑146                                                                                                                                                          CCACAGCAAGGCCGGGGAACGGCTGTGGAATGGTGCCGGGCTGGGACAGGTGTTTTTTGATGAACAGGGGCGGACGGCGCGGGTGTACCAGCTGGATGCTGGCGGGGGTGAGGCTACAGAGTTTAAAAACCGGGCGTAGTGAGATT    >  3:270909/1‑146                                                                                                                                                                                                                                                                                                               GAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCTGTAAAAACTCTGAATCTCACTACGCCCGGTTTTTAAACTCTGTAGCCTCACCCCCGCCAGCATCCAGCTGGTACACCCGCGCCGGCCGCCCCTGTTCATCAAAAAACACCTGTCCCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2472191‑2472345 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccagccACAGCAAGGCCGGGGAACGGCTGTGGAATGGTGCCGGGCTGGGACAGGTGTTTTTTGATGAACAGGGGCGGCCGGCGCGGGTGTACCAGCTGGATGCTGGCGGGGGTGAGGCTACAGAGTTTAAAAACCGGGCGTAGTGAGATTCA  <  NC_002947/2472381‑2472236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.